Incidental Mutation 'IGL01667:Vmn1r169'
ID 103350
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn1r169
Ensembl Gene ENSMUSG00000094602
Gene Name vomeronasal 1 receptor 169
Synonyms Gm4232
Accession Numbers
Essential gene? Probably non essential (E-score: 0.062) question?
Stock # IGL01667
Quality Score
Status
Chromosome 7
Chromosomal Location 23276610-23277524 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 23277225 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Methionine to Leucine at position 206 (M206L)
Ref Sequence ENSEMBL: ENSMUSP00000154343 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000170290] [ENSMUST00000226669] [ENSMUST00000227547] [ENSMUST00000227932] [ENSMUST00000228832]
AlphaFold L7N275
Predicted Effect probably benign
Transcript: ENSMUST00000170290
AA Change: M206L

PolyPhen 2 Score 0.172 (Sensitivity: 0.92; Specificity: 0.87)
SMART Domains Protein: ENSMUSP00000126133
Gene: ENSMUSG00000094602
AA Change: M206L

DomainStartEndE-ValueType
Pfam:TAS2R 8 295 4e-14 PFAM
Pfam:V1R 41 295 2.1e-21 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000226669
AA Change: M206L

PolyPhen 2 Score 0.172 (Sensitivity: 0.92; Specificity: 0.87)
Predicted Effect probably benign
Transcript: ENSMUST00000227547
AA Change: M206L

PolyPhen 2 Score 0.172 (Sensitivity: 0.92; Specificity: 0.87)
Predicted Effect probably benign
Transcript: ENSMUST00000227932
AA Change: M206L

PolyPhen 2 Score 0.172 (Sensitivity: 0.92; Specificity: 0.87)
Predicted Effect probably benign
Transcript: ENSMUST00000228832
AA Change: M206L

PolyPhen 2 Score 0.172 (Sensitivity: 0.92; Specificity: 0.87)
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 34 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Akap13 A G 7: 75,219,767 (GRCm39) T57A probably damaging Het
Akna G T 4: 63,297,396 (GRCm39) T886N probably benign Het
Aqp9 A G 9: 71,045,495 (GRCm39) V38A probably benign Het
Awat2 C T X: 99,447,860 (GRCm39) G124D probably damaging Het
Camsap1 A G 2: 25,835,293 (GRCm39) probably benign Het
Catsperg2 T C 7: 29,409,558 (GRCm39) Y545C probably damaging Het
Cldn23 A G 8: 36,293,074 (GRCm39) F138S possibly damaging Het
Clec4a3 A C 6: 122,929,819 (GRCm39) probably benign Het
Dlgap3 C A 4: 127,127,690 (GRCm39) T786K probably benign Het
Dnah2 A C 11: 69,435,221 (GRCm39) S50A probably benign Het
Dnah2 A T 11: 69,411,767 (GRCm39) I285N probably damaging Het
Dnah7a A G 1: 53,586,451 (GRCm39) Y1467H probably damaging Het
Fgf22 C T 10: 79,592,588 (GRCm39) P115L probably damaging Het
Fzd2 G T 11: 102,496,608 (GRCm39) V351L possibly damaging Het
Gapdhs T A 7: 30,436,062 (GRCm39) E174V possibly damaging Het
Gjc2 A C 11: 59,068,344 (GRCm39) I46S probably damaging Het
Gm5581 T C 6: 131,144,735 (GRCm39) noncoding transcript Het
Krt1c C A 15: 101,724,765 (GRCm39) V282L possibly damaging Het
Myh15 G A 16: 49,015,942 (GRCm39) V1873M probably benign Het
Myo1b T C 1: 51,799,536 (GRCm39) T931A probably damaging Het
Myo6 A T 9: 80,197,175 (GRCm39) K965N unknown Het
Or5a3 T C 19: 12,400,120 (GRCm39) V149A probably benign Het
Pcnx3 T C 19: 5,736,658 (GRCm39) R160G probably benign Het
Slc22a16 T C 10: 40,461,014 (GRCm39) I272T probably damaging Het
Slc35b4 A G 6: 34,144,610 (GRCm39) Y82H possibly damaging Het
Spdya T C 17: 71,863,254 (GRCm39) M1T probably null Het
St6gal1 A G 16: 23,140,174 (GRCm39) N115S probably benign Het
Tbc1d12 A T 19: 38,902,744 (GRCm39) probably benign Het
Tfrc A G 16: 32,443,261 (GRCm39) probably benign Het
Trip11 A C 12: 101,845,121 (GRCm39) F1539C probably damaging Het
Ttn A T 2: 76,611,422 (GRCm39) I15624N possibly damaging Het
Zfp362 A G 4: 128,680,902 (GRCm39) L141P probably damaging Het
Zfp692 A G 11: 58,202,379 (GRCm39) H378R probably damaging Het
Zfp799 T C 17: 33,040,794 (GRCm39) Q52R possibly damaging Het
Other mutations in Vmn1r169
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00897:Vmn1r169 APN 7 23,277,019 (GRCm39) missense probably damaging 1.00
IGL01019:Vmn1r169 APN 7 23,276,611 (GRCm39) start codon destroyed probably null 0.99
IGL02246:Vmn1r169 APN 7 23,276,661 (GRCm39) missense probably benign 0.09
IGL03303:Vmn1r169 APN 7 23,277,434 (GRCm39) missense probably benign 0.40
R1345:Vmn1r169 UTSW 7 23,277,247 (GRCm39) missense probably damaging 1.00
R6471:Vmn1r169 UTSW 7 23,276,970 (GRCm39) missense probably benign 0.25
R7120:Vmn1r169 UTSW 7 23,277,444 (GRCm39) missense probably benign 0.00
R7268:Vmn1r169 UTSW 7 23,276,853 (GRCm39) missense probably benign 0.00
R7541:Vmn1r169 UTSW 7 23,277,412 (GRCm39) missense probably benign 0.04
R8782:Vmn1r169 UTSW 7 23,277,403 (GRCm39) missense possibly damaging 0.92
R8946:Vmn1r169 UTSW 7 23,276,640 (GRCm39) missense possibly damaging 0.81
R9277:Vmn1r169 UTSW 7 23,277,390 (GRCm39) missense probably benign 0.19
R9408:Vmn1r169 UTSW 7 23,277,342 (GRCm39) missense probably damaging 1.00
R9458:Vmn1r169 UTSW 7 23,276,628 (GRCm39) missense possibly damaging 0.47
Posted On 2014-01-21