Incidental Mutation 'IGL01680:Stoml1'
ID |
103753 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Stoml1
|
Ensembl Gene |
ENSMUSG00000032333 |
Gene Name |
stomatin-like 1 |
Synonyms |
WPB72, SLP-1, 1810015E19Rik, UNC-24 |
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
IGL01680
|
Quality Score |
|
Status
|
|
Chromosome |
9 |
Chromosomal Location |
58160447-58169803 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 58163996 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Valine to Alanine
at position 105
(V105A)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000034883
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000034883]
[ENSMUST00000215488]
[ENSMUST00000216864]
[ENSMUST00000216877]
[ENSMUST00000217165]
|
AlphaFold |
no structure available at present |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000034883
AA Change: V105A
PolyPhen 2
Score 0.965 (Sensitivity: 0.78; Specificity: 0.95)
|
SMART Domains |
Protein: ENSMUSP00000034883 Gene: ENSMUSG00000032333 AA Change: V105A
Domain | Start | End | E-Value | Type |
low complexity region
|
57 |
69 |
N/A |
INTRINSIC |
PHB
|
77 |
237 |
7.08e-42 |
SMART |
Pfam:SCP2
|
292 |
396 |
7.2e-21 |
PFAM |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000215079
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000215488
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000216187
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000216864
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000216877
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000217026
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000217165
|
Coding Region Coverage |
|
Validation Efficiency |
|
MGI Phenotype |
PHENOTYPE: Mice homozygous for a gene-trapped allele are viable and free of overt neurological phenotypes but show a mild, but specific, disinhibition of certain proton-gated currents in dorsal root ganglia neurons. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 37 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adgre1 |
T |
C |
17: 57,709,620 (GRCm39) |
W121R |
unknown |
Het |
Adprh |
C |
T |
16: 38,270,578 (GRCm39) |
G76S |
possibly damaging |
Het |
Arhgap31 |
T |
C |
16: 38,423,976 (GRCm39) |
T697A |
probably benign |
Het |
Ces2f |
T |
C |
8: 105,680,705 (GRCm39) |
M489T |
probably benign |
Het |
Clec5a |
A |
G |
6: 40,561,314 (GRCm39) |
Y44H |
probably benign |
Het |
Csmd3 |
T |
C |
15: 47,833,426 (GRCm39) |
H950R |
probably damaging |
Het |
Dennd10 |
A |
G |
19: 60,805,972 (GRCm39) |
T86A |
possibly damaging |
Het |
Dgkz |
G |
T |
2: 91,766,210 (GRCm39) |
P784T |
probably benign |
Het |
Dok1 |
T |
C |
6: 83,008,293 (GRCm39) |
D463G |
possibly damaging |
Het |
Eif4a2 |
C |
A |
16: 22,927,941 (GRCm39) |
Q94K |
probably benign |
Het |
Epg5 |
T |
C |
18: 78,055,956 (GRCm39) |
L1710P |
probably damaging |
Het |
Fign |
A |
G |
2: 63,808,988 (GRCm39) |
|
probably benign |
Het |
Gbp10 |
T |
C |
5: 105,372,137 (GRCm39) |
|
probably null |
Het |
Gga2 |
G |
T |
7: 121,597,299 (GRCm39) |
D363E |
probably benign |
Het |
Glis2 |
T |
A |
16: 4,429,195 (GRCm39) |
F133I |
possibly damaging |
Het |
Isg20 |
A |
G |
7: 78,566,333 (GRCm39) |
D94G |
probably damaging |
Het |
Kif23 |
T |
C |
9: 61,839,096 (GRCm39) |
D319G |
probably benign |
Het |
Lbr |
C |
A |
1: 181,663,759 (GRCm39) |
R87L |
probably damaging |
Het |
Map3k9 |
T |
C |
12: 81,771,513 (GRCm39) |
T715A |
probably benign |
Het |
Mapk14 |
T |
C |
17: 28,944,820 (GRCm39) |
|
probably null |
Het |
Mpp4 |
A |
C |
1: 59,169,226 (GRCm39) |
C341W |
probably benign |
Het |
Mroh9 |
C |
T |
1: 162,875,551 (GRCm39) |
|
probably null |
Het |
Myo16 |
T |
C |
8: 10,322,630 (GRCm39) |
V20A |
probably damaging |
Het |
Or12e8 |
T |
C |
2: 87,188,249 (GRCm39) |
S154P |
probably damaging |
Het |
Or52p2 |
A |
T |
7: 102,237,436 (GRCm39) |
C171* |
probably null |
Het |
Or7c19 |
A |
T |
8: 85,957,308 (GRCm39) |
L61F |
probably benign |
Het |
Pofut2 |
C |
T |
10: 77,099,127 (GRCm39) |
R186W |
probably damaging |
Het |
Ppp1r1b |
T |
A |
11: 98,241,392 (GRCm39) |
|
probably null |
Het |
Slc34a2 |
A |
G |
5: 53,218,218 (GRCm39) |
I166V |
probably damaging |
Het |
Slc4a2 |
A |
G |
5: 24,637,928 (GRCm39) |
T375A |
probably benign |
Het |
Slitrk5 |
C |
A |
14: 111,916,432 (GRCm39) |
H19N |
probably benign |
Het |
Sptb |
T |
A |
12: 76,677,456 (GRCm39) |
Q126L |
probably damaging |
Het |
Stt3b |
C |
A |
9: 115,075,329 (GRCm39) |
|
probably benign |
Het |
Thbs4 |
T |
C |
13: 92,913,488 (GRCm39) |
E144G |
probably benign |
Het |
Tns3 |
A |
G |
11: 8,498,937 (GRCm39) |
Y49H |
probably damaging |
Het |
Vmn2r87 |
C |
T |
10: 130,315,586 (GRCm39) |
W160* |
probably null |
Het |
Zfp647 |
T |
A |
15: 76,801,968 (GRCm39) |
|
probably benign |
Het |
|
Other mutations in Stoml1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL02693:Stoml1
|
APN |
9 |
58,164,359 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL03180:Stoml1
|
APN |
9 |
58,168,200 (GRCm39) |
missense |
probably damaging |
1.00 |
R1464:Stoml1
|
UTSW |
9 |
58,167,709 (GRCm39) |
unclassified |
probably benign |
|
R5632:Stoml1
|
UTSW |
9 |
58,160,653 (GRCm39) |
missense |
probably damaging |
1.00 |
R5836:Stoml1
|
UTSW |
9 |
58,168,123 (GRCm39) |
missense |
probably benign |
|
R6558:Stoml1
|
UTSW |
9 |
58,163,951 (GRCm39) |
missense |
probably damaging |
1.00 |
R6652:Stoml1
|
UTSW |
9 |
58,164,017 (GRCm39) |
missense |
probably damaging |
0.99 |
R6881:Stoml1
|
UTSW |
9 |
58,168,177 (GRCm39) |
missense |
probably damaging |
1.00 |
R7006:Stoml1
|
UTSW |
9 |
58,167,523 (GRCm39) |
missense |
probably damaging |
0.96 |
R7607:Stoml1
|
UTSW |
9 |
58,163,941 (GRCm39) |
missense |
probably damaging |
1.00 |
R9136:Stoml1
|
UTSW |
9 |
58,168,236 (GRCm39) |
missense |
possibly damaging |
0.83 |
R9156:Stoml1
|
UTSW |
9 |
58,164,409 (GRCm39) |
missense |
|
|
R9471:Stoml1
|
UTSW |
9 |
58,163,968 (GRCm39) |
missense |
probably damaging |
1.00 |
X0020:Stoml1
|
UTSW |
9 |
58,168,084 (GRCm39) |
missense |
probably benign |
0.08 |
X0058:Stoml1
|
UTSW |
9 |
58,164,449 (GRCm39) |
missense |
probably damaging |
0.99 |
|
Posted On |
2014-01-21 |