Incidental Mutation 'IGL01710:Trim36'
ID 104774
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Trim36
Ensembl Gene ENSMUSG00000033949
Gene Name tripartite motif-containing 36
Synonyms Haprin, D18Wsu100e
Accession Numbers
Essential gene? Possibly non essential (E-score: 0.283) question?
Stock # IGL01710
Quality Score
Status
Chromosome 18
Chromosomal Location 46298367-46345674 bp(-) (GRCm39)
Type of Mutation splice site
DNA Base Change (assembly) T to C at 46321455 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000129771 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000037011] [ENSMUST00000167364]
AlphaFold Q80WG7
Predicted Effect probably benign
Transcript: ENSMUST00000037011
SMART Domains Protein: ENSMUSP00000037978
Gene: ENSMUSG00000033949

DomainStartEndE-ValueType
RING 33 118 1.25e-5 SMART
BBOX 207 249 1.82e-7 SMART
Blast:BBC 256 381 5e-11 BLAST
FN3 418 498 1.32e-1 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000167364
SMART Domains Protein: ENSMUSP00000129771
Gene: ENSMUSG00000033949

DomainStartEndE-ValueType
RING 21 106 1.25e-5 SMART
BBOX 195 237 1.82e-7 SMART
Blast:BBC 244 369 4e-11 BLAST
FN3 406 486 1.32e-1 SMART
Pfam:SPRY 560 704 1.7e-9 PFAM
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. Multiple alternatively spliced transcript variants that encode different protein isoforms have been described for this gene. [provided by RefSeq, Jul 2008]
Allele List at MGI
Other mutations in this stock
Total: 41 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Ablim3 G A 18: 62,004,645 (GRCm39) T48I probably damaging Het
Ccpg1 T C 9: 72,904,723 (GRCm39) probably benign Het
Chkb G A 15: 89,310,843 (GRCm39) Q379* probably null Het
Chst15 T A 7: 131,872,236 (GRCm39) D15V probably benign Het
Cntn4 G A 6: 106,527,392 (GRCm39) V425I possibly damaging Het
Cpa6 T A 1: 10,395,497 (GRCm39) N390I probably damaging Het
Efhd2 A G 4: 141,587,872 (GRCm39) F193S probably damaging Het
Ell3 T C 2: 121,271,993 (GRCm39) H128R probably damaging Het
Ercc5 T G 1: 44,203,235 (GRCm39) L291V probably damaging Het
Eva1c A G 16: 90,701,235 (GRCm39) Y302C probably damaging Het
Fmo3 A C 1: 162,810,612 (GRCm39) L26R probably damaging Het
Galntl6 T A 8: 58,989,002 (GRCm39) D17V probably damaging Het
Gm6483 C T 8: 19,741,629 (GRCm39) P55S probably damaging Het
Gstt2 A G 10: 75,669,579 (GRCm39) probably benign Het
Hmcn2 T A 2: 31,233,114 (GRCm39) L221Q probably damaging Het
Hoxa3 T C 6: 52,147,554 (GRCm39) probably benign Het
Kctd12b T C X: 152,472,479 (GRCm39) D70G probably damaging Het
Kdm7a T A 6: 39,152,320 (GRCm39) E125D probably benign Het
Klk1b21 T A 7: 43,755,919 (GRCm39) F249L probably benign Het
Mrpl41 T C 2: 24,864,429 (GRCm39) D81G possibly damaging Het
Nomo1 T A 7: 45,687,980 (GRCm39) L82Q probably damaging Het
Or5p58 G T 7: 107,694,449 (GRCm39) F109L probably benign Het
Papolg A T 11: 23,814,026 (GRCm39) S718T probably damaging Het
Pex6 A G 17: 47,036,252 (GRCm39) probably benign Het
Pi4k2a T A 19: 42,093,418 (GRCm39) L253Q probably damaging Het
Prdx6b T A 2: 80,123,490 (GRCm39) F100I probably damaging Het
Prr36 G A 8: 4,265,243 (GRCm39) P169L probably damaging Het
Ptgfrn T C 3: 100,980,404 (GRCm39) E312G probably damaging Het
Rasgrf1 A G 9: 89,873,745 (GRCm39) I685V probably benign Het
Setdb1 T C 3: 95,246,164 (GRCm39) E586G probably damaging Het
Sez6l2 C A 7: 126,567,388 (GRCm39) T841K probably damaging Het
Slc25a17 A T 15: 81,211,527 (GRCm39) L163* probably null Het
Slc35f3 A T 8: 127,115,900 (GRCm39) I276F probably benign Het
Tcerg1l T A 7: 137,996,789 (GRCm39) K149N possibly damaging Het
Tex28 T A X: 73,195,939 (GRCm39) K278* probably null Het
Tmprss9 A G 10: 80,733,793 (GRCm39) probably benign Het
Tnfaip8l1 A G 17: 56,478,782 (GRCm39) K24R probably benign Het
Uba1 C T X: 20,537,604 (GRCm39) T274I possibly damaging Het
Ubr2 T C 17: 47,254,335 (GRCm39) T1439A probably benign Het
Ubr4 A G 4: 139,145,772 (GRCm39) D1523G possibly damaging Het
Uchl4 A T 9: 64,142,788 (GRCm39) T90S probably benign Het
Other mutations in Trim36
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02728:Trim36 APN 18 46,305,669 (GRCm39) missense probably benign 0.00
IGL03166:Trim36 APN 18 46,345,388 (GRCm39) missense probably benign
IGL03209:Trim36 APN 18 46,300,575 (GRCm39) missense probably benign
R0346:Trim36 UTSW 18 46,332,776 (GRCm39) unclassified probably benign
R0426:Trim36 UTSW 18 46,305,592 (GRCm39) missense probably damaging 0.97
R0463:Trim36 UTSW 18 46,311,523 (GRCm39) missense possibly damaging 0.89
R0590:Trim36 UTSW 18 46,305,643 (GRCm39) missense probably benign 0.01
R0751:Trim36 UTSW 18 46,329,318 (GRCm39) missense probably damaging 1.00
R1037:Trim36 UTSW 18 46,329,385 (GRCm39) splice site probably benign
R1184:Trim36 UTSW 18 46,329,318 (GRCm39) missense probably damaging 1.00
R1522:Trim36 UTSW 18 46,319,250 (GRCm39) nonsense probably null
R1571:Trim36 UTSW 18 46,305,562 (GRCm39) missense probably benign 0.01
R1687:Trim36 UTSW 18 46,321,724 (GRCm39) missense possibly damaging 0.93
R2057:Trim36 UTSW 18 46,329,229 (GRCm39) missense probably benign 0.02
R2103:Trim36 UTSW 18 46,329,149 (GRCm39) missense probably benign
R2127:Trim36 UTSW 18 46,345,404 (GRCm39) missense probably benign 0.27
R3853:Trim36 UTSW 18 46,305,439 (GRCm39) splice site probably benign
R4209:Trim36 UTSW 18 46,329,191 (GRCm39) missense probably benign 0.44
R4787:Trim36 UTSW 18 46,305,599 (GRCm39) missense probably benign 0.10
R4810:Trim36 UTSW 18 46,305,536 (GRCm39) missense probably benign 0.07
R4953:Trim36 UTSW 18 46,329,245 (GRCm39) missense possibly damaging 0.90
R5107:Trim36 UTSW 18 46,305,705 (GRCm39) missense probably benign
R5320:Trim36 UTSW 18 46,300,565 (GRCm39) missense probably damaging 1.00
R5683:Trim36 UTSW 18 46,302,359 (GRCm39) missense probably damaging 1.00
R5823:Trim36 UTSW 18 46,302,407 (GRCm39) missense probably damaging 1.00
R6619:Trim36 UTSW 18 46,321,475 (GRCm39) missense probably damaging 0.96
R7349:Trim36 UTSW 18 46,302,495 (GRCm39) missense probably benign 0.29
R7814:Trim36 UTSW 18 46,300,691 (GRCm39) missense possibly damaging 0.64
R7853:Trim36 UTSW 18 46,305,558 (GRCm39) missense probably benign 0.14
R8008:Trim36 UTSW 18 46,305,556 (GRCm39) missense probably benign 0.34
R8294:Trim36 UTSW 18 46,331,588 (GRCm39) missense probably benign 0.02
R8735:Trim36 UTSW 18 46,302,452 (GRCm39) missense probably benign 0.10
R8899:Trim36 UTSW 18 46,302,264 (GRCm39) missense possibly damaging 0.69
R9091:Trim36 UTSW 18 46,300,580 (GRCm39) missense possibly damaging 0.80
R9106:Trim36 UTSW 18 46,300,664 (GRCm39) missense possibly damaging 0.76
R9135:Trim36 UTSW 18 46,302,410 (GRCm39) missense probably benign 0.03
R9262:Trim36 UTSW 18 46,300,506 (GRCm39) missense probably benign 0.01
R9270:Trim36 UTSW 18 46,300,580 (GRCm39) missense possibly damaging 0.80
R9505:Trim36 UTSW 18 46,329,281 (GRCm39) missense probably damaging 1.00
R9587:Trim36 UTSW 18 46,308,722 (GRCm39) missense probably benign 0.06
R9623:Trim36 UTSW 18 46,308,623 (GRCm39) missense probably benign 0.16
R9763:Trim36 UTSW 18 46,309,125 (GRCm39) missense probably benign 0.42
Posted On 2014-01-21