Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL00766:Rprd2'

13864

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Rprd2

Ensembl Gene

ENSMUSG00000028106

Gene Name

regulation of nuclear pre-mRNA domain containing 2

Synonyms

2810036A19Rik, 6720469I21Rik, 4930535B03Rik

Accession Numbers

Essential gene?

Possibly essential (E-score: 0.745) question?

Stock #

IGL00766

Quality Score

Status

Chromosome

Chromosomal Location

95667653-95726175 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 95672691 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Alanine at position 904 (V904A)

Ref Sequence

ENSEMBL: ENSMUSP00000088297 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000090791]

AlphaFold

Q6NXI6

Predicted Effect

possibly damaging
Transcript: ENSMUST00000090791
AA Change: V904A

PolyPhen 2 Score 0.952 (Sensitivity: 0.79; Specificity: 0.95)

SMART Domains

Protein: ENSMUSP00000088297
Gene: ENSMUSG00000028106
AA Change: V904A

Domain	Start	End	E-Value	Type
RPR	26	146	3.6e-29	SMART
Pfam:CREPT	210	351	9.3e-11	PFAM
low complexity region	431	465	N/A	INTRINSIC
low complexity region	576	591	N/A	INTRINSIC
low complexity region	612	633	N/A	INTRINSIC
low complexity region	670	686	N/A	INTRINSIC
low complexity region	777	793	N/A	INTRINSIC
low complexity region	1159	1179	N/A	INTRINSIC
low complexity region	1195	1208	N/A	INTRINSIC
low complexity region	1230	1238	N/A	INTRINSIC
low complexity region	1272	1295	N/A	INTRINSIC
low complexity region	1300	1323	N/A	INTRINSIC
low complexity region	1373	1409	N/A	INTRINSIC
low complexity region	1446	1467	N/A	INTRINSIC

Predicted Effect

unknown
Transcript: ENSMUST00000200164
AA Change: V820A

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 34 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adgrl3	T	A	5: 81,942,415 (GRCm39)	D1379E	probably damaging	Het
Akap13	A	G	7: 75,354,260 (GRCm39)	T1794A	probably damaging	Het
Ano2	A	T	6: 125,990,216 (GRCm39)	D779V	probably damaging	Het
Ap3b1	G	T	13: 94,679,392 (GRCm39)		probably benign	Het
Arfgef1	A	G	1: 10,270,012 (GRCm39)	V379A	probably benign	Het
Arhgef10	A	G	8: 15,025,006 (GRCm39)	Y398C	probably damaging	Het
Arid2	C	T	15: 96,268,286 (GRCm39)	R800C	probably benign	Het
Ccdc88a	T	A	11: 29,451,046 (GRCm39)	H306Q	probably damaging	Het
Cckar	C	A	5: 53,857,378 (GRCm39)	R344L	probably damaging	Het
Cplane1	A	T	15: 8,281,648 (GRCm39)	Q2829L	unknown	Het
Egfem1	A	G	3: 29,711,302 (GRCm39)	I237V	possibly damaging	Het
Erlec1	T	A	11: 30,900,623 (GRCm39)	K143*	probably null	Het
Glyat	T	G	19: 12,628,626 (GRCm39)	D140E	probably benign	Het
Grhl2	T	C	15: 37,336,545 (GRCm39)	F50L	probably damaging	Het
Havcr2	T	C	11: 46,360,373 (GRCm39)	V151A	probably damaging	Het
Herc1	A	G	9: 66,358,023 (GRCm39)	Y2368C	probably damaging	Het
Ift80	A	T	3: 68,821,986 (GRCm39)	Y686*	probably null	Het
Itga7	G	T	10: 128,777,723 (GRCm39)	D235Y	possibly damaging	Het
Kctd3	C	T	1: 188,727,973 (GRCm39)	V199I	probably benign	Het
Mettl25	A	G	10: 105,615,443 (GRCm39)		probably benign	Het
Myoz2	G	A	3: 122,810,193 (GRCm39)		probably benign	Het
Nepro	C	T	16: 44,549,668 (GRCm39)	Q43*	probably null	Het
Ophn1	T	C	X: 97,846,720 (GRCm39)	D74G	probably damaging	Het
Plau	A	G	14: 20,888,635 (GRCm39)	N84S	probably benign	Het
Satl1	T	C	X: 111,315,466 (GRCm39)	K330E	possibly damaging	Het
Sis	C	T	3: 72,814,570 (GRCm39)		probably benign	Het
Slc5a5	A	C	8: 71,341,181 (GRCm39)	I386S	probably damaging	Het
Slco1c1	T	C	6: 141,493,609 (GRCm39)	Y264H	probably damaging	Het
Sulf1	A	C	1: 12,890,687 (GRCm39)	D375A	probably damaging	Het
Tesl1	C	A	X: 23,772,838 (GRCm39)	A113E	probably benign	Het
Tgfbi	A	G	13: 56,778,408 (GRCm39)	D393G	probably benign	Het
Trim59	A	C	3: 68,944,712 (GRCm39)	D209E	probably benign	Het
Ubqln3	G	T	7: 103,792,031 (GRCm39)	Q20K	probably benign	Het
Ubr4	A	G	4: 139,168,077 (GRCm39)	D2808G	probably damaging	Het

Other mutations in Rprd2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00773:Rprd2	APN	3	95,672,421 (GRCm39)	missense	probably damaging	1.00
IGL00792:Rprd2	APN	3	95,692,416 (GRCm39)	missense	probably benign	0.05
IGL01022:Rprd2	APN	3	95,671,066 (GRCm39)	nonsense	probably null
IGL01121:Rprd2	APN	3	95,683,862 (GRCm39)	missense	probably damaging	1.00
IGL01299:Rprd2	APN	3	95,683,859 (GRCm39)	missense	probably damaging	1.00
IGL01387:Rprd2	APN	3	95,672,631 (GRCm39)	missense	probably benign
IGL01414:Rprd2	APN	3	95,672,837 (GRCm39)	missense	probably damaging	1.00
IGL02283:Rprd2	APN	3	95,672,815 (GRCm39)	missense	probably damaging	0.98
IGL02336:Rprd2	APN	3	95,694,622 (GRCm39)	missense	probably benign	0.17
R0131:Rprd2	UTSW	3	95,681,673 (GRCm39)	missense	probably damaging	1.00
R0131:Rprd2	UTSW	3	95,681,673 (GRCm39)	missense	probably damaging	1.00
R0132:Rprd2	UTSW	3	95,681,673 (GRCm39)	missense	probably damaging	1.00
R0574:Rprd2	UTSW	3	95,681,669 (GRCm39)	missense	possibly damaging	0.58
R0718:Rprd2	UTSW	3	95,673,699 (GRCm39)	missense	probably benign	0.30
R0847:Rprd2	UTSW	3	95,672,725 (GRCm39)	missense	probably benign	0.00
R0942:Rprd2	UTSW	3	95,672,730 (GRCm39)	missense	probably damaging	1.00
R0943:Rprd2	UTSW	3	95,691,559 (GRCm39)	missense	possibly damaging	0.88
R0980:Rprd2	UTSW	3	95,673,216 (GRCm39)	missense	probably damaging	1.00
R1448:Rprd2	UTSW	3	95,725,888 (GRCm39)	missense	possibly damaging	0.57
R1542:Rprd2	UTSW	3	95,672,988 (GRCm39)	missense	possibly damaging	0.69
R1577:Rprd2	UTSW	3	95,672,047 (GRCm39)	missense	probably damaging	1.00
R1598:Rprd2	UTSW	3	95,726,051 (GRCm39)	unclassified	probably benign
R1640:Rprd2	UTSW	3	95,671,059 (GRCm39)	unclassified	probably benign
R1670:Rprd2	UTSW	3	95,672,115 (GRCm39)	missense	probably damaging	1.00
R2430:Rprd2	UTSW	3	95,672,107 (GRCm39)	nonsense	probably null
R2966:Rprd2	UTSW	3	95,673,745 (GRCm39)	splice site	probably null
R3612:Rprd2	UTSW	3	95,671,464 (GRCm39)	missense	probably damaging	0.98
R3712:Rprd2	UTSW	3	95,671,872 (GRCm39)	missense	probably damaging	0.97
R3890:Rprd2	UTSW	3	95,672,536 (GRCm39)	missense	probably damaging	1.00
R4777:Rprd2	UTSW	3	95,694,686 (GRCm39)	missense	probably benign	0.41
R4783:Rprd2	UTSW	3	95,681,645 (GRCm39)	missense	probably benign	0.03
R4832:Rprd2	UTSW	3	95,681,483 (GRCm39)	missense	probably damaging	1.00
R4928:Rprd2	UTSW	3	95,671,849 (GRCm39)	missense	probably damaging	1.00
R4976:Rprd2	UTSW	3	95,673,661 (GRCm39)	missense	probably damaging	1.00
R4989:Rprd2	UTSW	3	95,672,632 (GRCm39)	missense	probably benign	0.03
R5134:Rprd2	UTSW	3	95,672,632 (GRCm39)	missense	probably benign	0.03
R5244:Rprd2	UTSW	3	95,697,494 (GRCm39)	missense	possibly damaging	0.80
R5314:Rprd2	UTSW	3	95,671,401 (GRCm39)	missense	possibly damaging	0.53
R5579:Rprd2	UTSW	3	95,692,371 (GRCm39)	missense	probably damaging	1.00
R5954:Rprd2	UTSW	3	95,672,175 (GRCm39)	missense	probably damaging	1.00
R6016:Rprd2	UTSW	3	95,694,685 (GRCm39)	missense	probably damaging	0.97
R6332:Rprd2	UTSW	3	95,687,753 (GRCm39)	missense	probably damaging	0.99
R6403:Rprd2	UTSW	3	95,673,399 (GRCm39)	missense	possibly damaging	0.77
R6415:Rprd2	UTSW	3	95,681,531 (GRCm39)	missense	probably benign	0.00
R7064:Rprd2	UTSW	3	95,672,328 (GRCm39)	missense	probably damaging	1.00
R7313:Rprd2	UTSW	3	95,684,022 (GRCm39)	missense	probably damaging	1.00
R7496:Rprd2	UTSW	3	95,673,087 (GRCm39)	missense	probably damaging	1.00
R7535:Rprd2	UTSW	3	95,683,899 (GRCm39)	missense	probably damaging	0.96
R8716:Rprd2	UTSW	3	95,684,105 (GRCm39)	missense	probably damaging	1.00
R8822:Rprd2	UTSW	3	95,691,613 (GRCm39)	missense	probably damaging	1.00
R8891:Rprd2	UTSW	3	95,671,367 (GRCm39)	missense	possibly damaging	0.85
R8922:Rprd2	UTSW	3	95,687,896 (GRCm39)	missense	probably damaging	0.99
R9030:Rprd2	UTSW	3	95,691,622 (GRCm39)	missense	probably benign	0.15
R9623:Rprd2	UTSW	3	95,679,505 (GRCm39)	missense	probably benign	0.30
RF034:Rprd2	UTSW	3	95,673,632 (GRCm39)	small deletion	probably benign
RF056:Rprd2	UTSW	3	95,673,631 (GRCm39)	small deletion	probably benign

Posted On

2012-12-06