Incidental Mutation 'IGL00159:Vps35l'
ID 1445
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vps35l
Ensembl Gene ENSMUSG00000030982
Gene Name VPS35 endosomal protein sorting factor like
Synonyms 9030624J02Rik, Vsp35l
Accession Numbers
Essential gene? Probably non essential (E-score: 0.110) question?
Stock # IGL00159
Quality Score
Status
Chromosome 7
Chromosomal Location 118339401-118440712 bp(+) (GRCm39)
Type of Mutation critical splice donor site (1 bp from exon)
DNA Base Change (assembly) G to A at 118396270 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Gene Model predicted gene model for transcript(s): [ENSMUST00000033280] [ENSMUST00000059390] [ENSMUST00000106552] [ENSMUST00000106553]
AlphaFold no structure available at present
Predicted Effect probably null
Transcript: ENSMUST00000033280
Predicted Effect probably null
Transcript: ENSMUST00000059390
SMART Domains Protein: ENSMUSP00000051263
Gene: ENSMUSG00000030982

DomainStartEndE-ValueType
low complexity region 71 100 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000106552
SMART Domains Protein: ENSMUSP00000102162
Gene: ENSMUSG00000030982

DomainStartEndE-ValueType
low complexity region 47 76 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000106553
SMART Domains Protein: ENSMUSP00000102163
Gene: ENSMUSG00000030982

DomainStartEndE-ValueType
low complexity region 47 76 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000149749
SMART Domains Protein: ENSMUSP00000121323
Gene: ENSMUSG00000030982

DomainStartEndE-ValueType
Pfam:Vps35 2 198 7.3e-10 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 40 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Axin1 A T 17: 26,361,779 (GRCm39) D41V possibly damaging Het
BC034090 C A 1: 155,101,197 (GRCm39) E718* probably null Het
Cdc123 G T 2: 5,809,746 (GRCm39) Q222K probably benign Het
Clip1 A C 5: 123,741,717 (GRCm39) V1053G possibly damaging Het
Dock7 T A 4: 98,952,222 (GRCm39) E416V probably damaging Het
Dydc1 T C 14: 40,809,370 (GRCm39) L143P probably damaging Het
Dync2h1 A G 9: 7,158,839 (GRCm39) V732A probably benign Het
Dzip1l T A 9: 99,519,830 (GRCm39) L119Q probably damaging Het
Erp27 T A 6: 136,886,500 (GRCm39) S178C probably damaging Het
Fbn1 A G 2: 125,239,793 (GRCm39) V298A probably benign Het
Fbxo34 A G 14: 47,766,931 (GRCm39) H97R probably damaging Het
Gm20521 C T 14: 55,122,079 (GRCm39) Q81* probably null Het
Gspt1 T C 16: 11,040,476 (GRCm39) M610V probably damaging Het
Herc1 A G 9: 66,344,964 (GRCm39) Q1919R possibly damaging Het
Il19 A G 1: 130,862,792 (GRCm39) probably benign Het
Kif14 G A 1: 136,396,756 (GRCm39) S354N probably benign Het
Lrrk2 A G 15: 91,632,002 (GRCm39) K1309E possibly damaging Het
Lurap1 T C 4: 115,994,887 (GRCm39) T115A probably damaging Het
Myo18b G T 5: 113,021,997 (GRCm39) T465K probably benign Het
Nwd1 A T 8: 73,397,705 (GRCm39) D648V probably damaging Het
Or13c25 T G 4: 52,911,618 (GRCm39) M59L possibly damaging Het
Or2at4 G A 7: 99,384,524 (GRCm39) R58H probably benign Het
Otof T C 5: 30,533,248 (GRCm39) Y1527C probably damaging Het
Otop3 G A 11: 115,235,223 (GRCm39) C285Y probably damaging Het
Parp3 A G 9: 106,348,586 (GRCm39) I478T probably benign Het
Pdzd2 C T 15: 12,458,069 (GRCm39) E265K possibly damaging Het
Pik3c2g T C 6: 139,841,851 (GRCm39) L634P probably damaging Het
Prkg1 C A 19: 31,279,740 (GRCm39) V165L probably benign Het
Riok3 A G 18: 12,281,948 (GRCm39) I306V possibly damaging Het
Ror2 T C 13: 53,267,118 (GRCm39) D439G probably benign Het
Scn2a T A 2: 65,573,434 (GRCm39) I1428N probably damaging Het
Sgcg C T 14: 61,469,924 (GRCm39) D146N probably benign Het
Skic3 T C 13: 76,291,397 (GRCm39) probably null Het
Slc16a9 A G 10: 70,118,529 (GRCm39) R283G probably benign Het
Sptb T C 12: 76,668,105 (GRCm39) D664G probably benign Het
Tmprss3 T A 17: 31,413,982 (GRCm39) D54V probably damaging Het
Tubd1 G T 11: 86,456,555 (GRCm39) V374F probably benign Het
Vmn2r57 A T 7: 41,078,209 (GRCm39) M83K probably benign Het
Vps13c A G 9: 67,853,281 (GRCm39) E2458G probably benign Het
Zhx2 A T 15: 57,686,266 (GRCm39) E545V probably damaging Het
Other mutations in Vps35l
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00229:Vps35l APN 7 118,403,414 (GRCm39) splice site probably benign
IGL01066:Vps35l APN 7 118,372,234 (GRCm39) splice site probably null
IGL01433:Vps35l APN 7 118,373,274 (GRCm39) splice site probably null
IGL02381:Vps35l APN 7 118,374,598 (GRCm39) missense probably damaging 1.00
IGL02566:Vps35l APN 7 118,352,055 (GRCm39) missense probably benign 0.04
IGL03199:Vps35l APN 7 118,365,611 (GRCm39) missense probably benign 0.18
IGL03224:Vps35l APN 7 118,391,776 (GRCm39) unclassified probably benign
R0535:Vps35l UTSW 7 118,347,404 (GRCm39) missense possibly damaging 0.95
R1109:Vps35l UTSW 7 118,374,552 (GRCm39) missense probably damaging 0.97
R1378:Vps35l UTSW 7 118,393,796 (GRCm39) missense probably damaging 1.00
R1378:Vps35l UTSW 7 118,393,795 (GRCm39) nonsense probably null
R1412:Vps35l UTSW 7 118,409,194 (GRCm39) missense probably damaging 0.99
R1474:Vps35l UTSW 7 118,359,436 (GRCm39) missense probably damaging 1.00
R1586:Vps35l UTSW 7 118,409,195 (GRCm39) missense probably damaging 1.00
R1785:Vps35l UTSW 7 118,393,798 (GRCm39) missense probably damaging 1.00
R1786:Vps35l UTSW 7 118,393,798 (GRCm39) missense probably damaging 1.00
R1921:Vps35l UTSW 7 118,432,971 (GRCm39) missense probably damaging 0.98
R1971:Vps35l UTSW 7 118,374,557 (GRCm39) missense probably damaging 1.00
R2038:Vps35l UTSW 7 118,411,097 (GRCm39) missense probably damaging 0.98
R2107:Vps35l UTSW 7 118,393,762 (GRCm39) unclassified probably benign
R2130:Vps35l UTSW 7 118,393,798 (GRCm39) missense probably damaging 1.00
R2131:Vps35l UTSW 7 118,393,798 (GRCm39) missense probably damaging 1.00
R2132:Vps35l UTSW 7 118,393,798 (GRCm39) missense probably damaging 1.00
R2133:Vps35l UTSW 7 118,393,798 (GRCm39) missense probably damaging 1.00
R2405:Vps35l UTSW 7 118,391,818 (GRCm39) missense probably damaging 1.00
R2411:Vps35l UTSW 7 118,391,818 (GRCm39) missense probably damaging 1.00
R3910:Vps35l UTSW 7 118,345,613 (GRCm39) missense possibly damaging 0.86
R3911:Vps35l UTSW 7 118,345,613 (GRCm39) missense possibly damaging 0.86
R3912:Vps35l UTSW 7 118,345,613 (GRCm39) missense possibly damaging 0.86
R3971:Vps35l UTSW 7 118,433,022 (GRCm39) missense probably damaging 0.98
R4697:Vps35l UTSW 7 118,390,671 (GRCm39) missense probably damaging 1.00
R4964:Vps35l UTSW 7 118,379,491 (GRCm39) missense possibly damaging 0.84
R4980:Vps35l UTSW 7 118,406,232 (GRCm39) missense probably damaging 1.00
R5034:Vps35l UTSW 7 118,390,611 (GRCm39) missense probably damaging 0.99
R5309:Vps35l UTSW 7 118,412,799 (GRCm39) missense probably damaging 1.00
R5312:Vps35l UTSW 7 118,412,799 (GRCm39) missense probably damaging 1.00
R5743:Vps35l UTSW 7 118,396,234 (GRCm39) missense possibly damaging 0.89
R6017:Vps35l UTSW 7 118,409,144 (GRCm39) missense probably damaging 1.00
R6089:Vps35l UTSW 7 118,345,658 (GRCm39) missense possibly damaging 0.76
R6320:Vps35l UTSW 7 118,353,072 (GRCm39) missense probably benign 0.08
R6415:Vps35l UTSW 7 118,391,869 (GRCm39) missense probably damaging 1.00
R6861:Vps35l UTSW 7 118,342,898 (GRCm39) missense probably damaging 1.00
R7034:Vps35l UTSW 7 118,372,315 (GRCm39) missense probably damaging 1.00
R7036:Vps35l UTSW 7 118,372,315 (GRCm39) missense probably damaging 1.00
R7339:Vps35l UTSW 7 118,409,194 (GRCm39) missense probably damaging 0.99
R7456:Vps35l UTSW 7 118,403,340 (GRCm39) missense probably benign 0.01
R7493:Vps35l UTSW 7 118,393,800 (GRCm39) splice site probably null
R8064:Vps35l UTSW 7 118,353,147 (GRCm39) missense probably damaging 1.00
R8103:Vps35l UTSW 7 118,342,855 (GRCm39) missense probably benign 0.19
R8279:Vps35l UTSW 7 118,345,722 (GRCm39) missense probably benign
R8354:Vps35l UTSW 7 118,391,795 (GRCm39) missense probably benign 0.07
R8454:Vps35l UTSW 7 118,391,795 (GRCm39) missense probably benign 0.07
R8954:Vps35l UTSW 7 118,393,801 (GRCm39) missense possibly damaging 0.94
R9450:Vps35l UTSW 7 118,352,118 (GRCm39) critical splice donor site probably null
R9642:Vps35l UTSW 7 118,437,451 (GRCm39) missense probably benign 0.00
R9667:Vps35l UTSW 7 118,348,915 (GRCm39) critical splice donor site probably null
R9749:Vps35l UTSW 7 118,352,107 (GRCm39) missense probably benign 0.03
X0028:Vps35l UTSW 7 118,399,675 (GRCm39) missense possibly damaging 0.93
Posted On 2011-07-12