Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL00427:Vmn2r104'

14793

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Vmn2r104

Ensembl Gene

ENSMUSG00000090315

Gene Name

vomeronasal 2, receptor 104

Synonyms

V2r7

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.109) question?

Stock #

IGL00427

Quality Score

Status

Chromosome

Chromosomal Location

20249687-20268467 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 20258501 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Serine to Threonine at position 548 (S548T)

Ref Sequence

ENSEMBL: ENSMUSP00000129895 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000168050]

AlphaFold

E9Q2J5

Predicted Effect

probably damaging
Transcript: ENSMUST00000168050
AA Change: S548T

PolyPhen 2 Score 0.980 (Sensitivity: 0.75; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000129895
Gene: ENSMUSG00000090315
AA Change: S548T

Domain	Start	End	E-Value	Type
signal peptide	1	18	N/A	INTRINSIC
Pfam:ANF_receptor	85	457	4e-38	PFAM
Pfam:NCD3G	512	565	2.1e-20	PFAM
Pfam:7tm_3	598	833	1.7e-52	PFAM

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 42 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adcy3	A	G	12: 4,244,357 (GRCm39)	D289G	probably damaging	Het
Adnp	C	T	2: 168,024,482 (GRCm39)	D938N	probably benign	Het
Arpin	T	A	7: 79,577,423 (GRCm39)	N208I	probably benign	Het
Cby3	A	G	11: 50,248,638 (GRCm39)		probably benign	Het
Cmklr2	A	T	1: 63,222,497 (GRCm39)	I246N	probably damaging	Het
Cnih4	T	A	1: 180,981,312 (GRCm39)	S28T	probably damaging	Het
D130052B06Rik	G	T	11: 33,573,558 (GRCm39)	V97L	possibly damaging	Het
Dchs1	T	C	7: 105,407,631 (GRCm39)	E2067G	probably damaging	Het
Dennd6a	C	T	14: 26,329,768 (GRCm39)	T113I	probably damaging	Het
Dock4	T	A	12: 40,882,305 (GRCm39)	F1590L	possibly damaging	Het
Dop1a	G	T	9: 86,403,553 (GRCm39)	Q1582H	probably benign	Het
Dop1a	A	T	9: 86,403,552 (GRCm39)	Q1582L	probably damaging	Het
Dop1a	C	A	9: 86,403,551 (GRCm39)	Q1582K	possibly damaging	Het
Ebna1bp2	A	T	4: 118,483,018 (GRCm39)	K291M	probably damaging	Het
Evpl	G	T	11: 116,125,331 (GRCm39)	Q73K	probably benign	Het
Fam131b	G	T	6: 42,295,895 (GRCm39)	T139K	probably damaging	Het
Golga3	A	G	5: 110,368,753 (GRCm39)	T1358A	probably damaging	Het
Hgf	G	A	5: 16,783,484 (GRCm39)	D265N	probably benign	Het
Homer1	A	G	13: 93,538,622 (GRCm39)	N333S	probably benign	Het
Igkv17-134	A	T	6: 67,697,968 (GRCm39)		probably benign	Het
Il16	T	C	7: 83,301,666 (GRCm39)	D152G	probably benign	Het
Ireb2	T	C	9: 54,806,766 (GRCm39)		probably benign	Het
Itgb2	C	T	10: 77,393,790 (GRCm39)	T410I	probably benign	Het
Kctd14	C	A	7: 97,106,919 (GRCm39)	A111E	possibly damaging	Het
Lmod3	A	C	6: 97,229,258 (GRCm39)	V92G	probably damaging	Het
Lmtk2	A	G	5: 144,070,973 (GRCm39)	D83G	probably damaging	Het
Myh1	A	G	11: 67,111,691 (GRCm39)	E1682G	probably damaging	Het
Myo9a	T	A	9: 59,750,342 (GRCm39)		probably benign	Het
Nlrc4	T	C	17: 74,754,087 (GRCm39)	N99D	probably benign	Het
P2rx3	A	G	2: 84,865,616 (GRCm39)	Y10H	probably damaging	Het
Pcsk7	C	A	9: 45,838,958 (GRCm39)	D623E	probably benign	Het
Plxna1	A	G	6: 89,297,980 (GRCm39)	I1766T	probably damaging	Het
Ptk7	T	C	17: 46,885,353 (GRCm39)	Y691C	probably damaging	Het
Rec8	A	T	14: 55,856,108 (GRCm39)	T17S	probably damaging	Het
Rtraf-ps	A	C	3: 88,484,230 (GRCm39)		probably benign	Het
Ryr1	T	C	7: 28,804,162 (GRCm39)		probably benign	Het
Scg3	T	G	9: 75,570,519 (GRCm39)	K345T	probably damaging	Het
Serpina3b	A	T	12: 104,099,200 (GRCm39)	K238N	probably benign	Het
Slc38a9	T	A	13: 112,838,152 (GRCm39)	S306T	probably damaging	Het
Txndc16	A	G	14: 45,382,547 (GRCm39)		probably benign	Het
Vmn1r238	T	A	18: 3,123,243 (GRCm39)	Y57F	probably benign	Het
Xrcc1	T	A	7: 24,247,309 (GRCm39)		probably null	Het

Other mutations in Vmn2r104

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01098:Vmn2r104	APN	17	20,268,358 (GRCm39)	missense	probably benign	0.27
IGL01333:Vmn2r104	APN	17	20,263,055 (GRCm39)	missense	probably benign	0.17
IGL01527:Vmn2r104	APN	17	20,263,158 (GRCm39)	missense	possibly damaging	0.82
IGL01773:Vmn2r104	APN	17	20,260,930 (GRCm39)	missense	probably benign	0.10
IGL01939:Vmn2r104	APN	17	20,250,187 (GRCm39)	missense	probably damaging	0.99
IGL02121:Vmn2r104	APN	17	20,262,056 (GRCm39)	nonsense	probably null
IGL02305:Vmn2r104	APN	17	20,263,118 (GRCm39)	missense	probably benign	0.09
IGL02374:Vmn2r104	APN	17	20,263,048 (GRCm39)	missense	probably benign	0.34
IGL03260:Vmn2r104	APN	17	20,263,083 (GRCm39)	missense	probably benign	0.05
IGL03366:Vmn2r104	APN	17	20,249,866 (GRCm39)	missense	probably damaging	1.00
R0091:Vmn2r104	UTSW	17	20,262,075 (GRCm39)	missense	possibly damaging	0.79
R0125:Vmn2r104	UTSW	17	20,250,069 (GRCm39)	missense	probably damaging	0.98
R0257:Vmn2r104	UTSW	17	20,249,889 (GRCm39)	missense	probably damaging	1.00
R0381:Vmn2r104	UTSW	17	20,268,264 (GRCm39)	nonsense	probably null
R0709:Vmn2r104	UTSW	17	20,263,166 (GRCm39)	missense	probably damaging	1.00
R0786:Vmn2r104	UTSW	17	20,262,987 (GRCm39)	missense	probably benign
R1575:Vmn2r104	UTSW	17	20,262,477 (GRCm39)	missense	probably damaging	1.00
R1827:Vmn2r104	UTSW	17	20,262,497 (GRCm39)	missense	probably damaging	0.97
R1932:Vmn2r104	UTSW	17	20,261,031 (GRCm39)	missense	probably damaging	1.00
R1956:Vmn2r104	UTSW	17	20,262,313 (GRCm39)	missense	probably damaging	0.98
R2203:Vmn2r104	UTSW	17	20,250,083 (GRCm39)	missense	probably benign	0.05
R2205:Vmn2r104	UTSW	17	20,250,083 (GRCm39)	missense	probably benign	0.05
R2859:Vmn2r104	UTSW	17	20,268,455 (GRCm39)	missense	possibly damaging	0.82
R3701:Vmn2r104	UTSW	17	20,249,818 (GRCm39)	missense	probably damaging	1.00
R3834:Vmn2r104	UTSW	17	20,250,183 (GRCm39)	missense	probably benign	0.02
R4151:Vmn2r104	UTSW	17	20,250,147 (GRCm39)	missense	probably damaging	1.00
R4470:Vmn2r104	UTSW	17	20,262,503 (GRCm39)	missense	probably damaging	1.00
R4625:Vmn2r104	UTSW	17	20,268,443 (GRCm39)	missense	probably benign	0.00
R4754:Vmn2r104	UTSW	17	20,261,030 (GRCm39)	nonsense	probably null
R4911:Vmn2r104	UTSW	17	20,250,288 (GRCm39)	missense	probably benign	0.00
R5270:Vmn2r104	UTSW	17	20,258,528 (GRCm39)	missense	probably damaging	1.00
R5279:Vmn2r104	UTSW	17	20,262,146 (GRCm39)	missense	probably benign	0.07
R5311:Vmn2r104	UTSW	17	20,250,163 (GRCm39)	missense	probably damaging	1.00
R5370:Vmn2r104	UTSW	17	20,250,450 (GRCm39)	missense	probably damaging	0.97
R5461:Vmn2r104	UTSW	17	20,250,343 (GRCm39)	missense	probably damaging	1.00
R5683:Vmn2r104	UTSW	17	20,260,981 (GRCm39)	nonsense	probably null
R5795:Vmn2r104	UTSW	17	20,250,372 (GRCm39)	missense	probably benign	0.02
R5795:Vmn2r104	UTSW	17	20,250,544 (GRCm39)	missense	possibly damaging	0.89
R5970:Vmn2r104	UTSW	17	20,249,733 (GRCm39)	missense	probably benign	0.01
R5983:Vmn2r104	UTSW	17	20,261,970 (GRCm39)	missense	probably damaging	1.00
R5992:Vmn2r104	UTSW	17	20,249,747 (GRCm39)	missense	probably damaging	1.00
R6066:Vmn2r104	UTSW	17	20,258,573 (GRCm39)	missense	possibly damaging	0.69
R6156:Vmn2r104	UTSW	17	20,261,909 (GRCm39)	missense	probably damaging	1.00
R6182:Vmn2r104	UTSW	17	20,250,507 (GRCm39)	missense	probably benign	0.16
R6245:Vmn2r104	UTSW	17	20,261,829 (GRCm39)	missense	possibly damaging	0.69
R6333:Vmn2r104	UTSW	17	20,249,848 (GRCm39)	missense	probably benign	0.30
R6573:Vmn2r104	UTSW	17	20,262,487 (GRCm39)	missense	probably damaging	1.00
R7101:Vmn2r104	UTSW	17	20,250,358 (GRCm39)	missense	possibly damaging	0.65
R7123:Vmn2r104	UTSW	17	20,261,088 (GRCm39)	missense	probably benign	0.12
R7485:Vmn2r104	UTSW	17	20,249,737 (GRCm39)	missense	probably benign	0.01
R7514:Vmn2r104	UTSW	17	20,249,791 (GRCm39)	missense	probably damaging	1.00
R7634:Vmn2r104	UTSW	17	20,261,971 (GRCm39)	missense	possibly damaging	0.48
R7958:Vmn2r104	UTSW	17	20,262,988 (GRCm39)	missense	probably benign
R8031:Vmn2r104	UTSW	17	20,263,048 (GRCm39)	missense	probably benign	0.34
R8094:Vmn2r104	UTSW	17	20,250,483 (GRCm39)	missense	possibly damaging	0.77
R8191:Vmn2r104	UTSW	17	20,250,465 (GRCm39)	missense	possibly damaging	0.89
R8308:Vmn2r104	UTSW	17	20,261,040 (GRCm39)	missense	possibly damaging	0.55
R8691:Vmn2r104	UTSW	17	20,262,110 (GRCm39)	missense	probably damaging	0.98
R8795:Vmn2r104	UTSW	17	20,262,988 (GRCm39)	missense	probably benign
R8900:Vmn2r104	UTSW	17	20,261,924 (GRCm39)	missense	probably damaging	0.99
R8913:Vmn2r104	UTSW	17	20,249,968 (GRCm39)	missense	probably damaging	1.00
R9180:Vmn2r104	UTSW	17	20,263,087 (GRCm39)	missense	probably benign	0.00
R9199:Vmn2r104	UTSW	17	20,262,097 (GRCm39)	missense	probably damaging	0.99
R9282:Vmn2r104	UTSW	17	20,261,098 (GRCm39)	missense	probably damaging	1.00
R9303:Vmn2r104	UTSW	17	20,268,439 (GRCm39)	missense	possibly damaging	0.90
R9305:Vmn2r104	UTSW	17	20,268,439 (GRCm39)	missense	possibly damaging	0.90
R9322:Vmn2r104	UTSW	17	20,263,087 (GRCm39)	missense	probably benign	0.00
R9325:Vmn2r104	UTSW	17	20,268,433 (GRCm39)	missense	possibly damaging	0.95
R9414:Vmn2r104	UTSW	17	20,250,250 (GRCm39)	missense	probably damaging	0.99
R9785:Vmn2r104	UTSW	17	20,268,409 (GRCm39)	missense	probably benign
RF007:Vmn2r104	UTSW	17	20,268,302 (GRCm39)	missense	probably benign	0.36
Z1177:Vmn2r104	UTSW	17	20,250,051 (GRCm39)	missense	probably damaging	1.00

Posted On

2012-12-06