Incidental Mutation 'IGL00847:Gm20422'
ID15007
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Gm20422
Ensembl Gene ENSMUSG00000092544
Gene Namepredicted gene 20422
Synonyms
Accession Numbers
Is this an essential gene? Not available question?
Stock #IGL00847
Quality Score
Status
Chromosome8
Chromosomal Location69742862-69774886 bp(-) (GRCm38)
Type of Mutationnonsense
DNA Base Change (assembly) A to T at 69742992 bp
ZygosityHeterozygous
Amino Acid Change Cysteine to Stop codon at position 212 (C212*)
Ref Sequence ENSEMBL: ENSMUSP00000123252 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000130458] [ENSMUST00000149782] [ENSMUST00000154063]
Predicted Effect probably benign
Transcript: ENSMUST00000126915
SMART Domains Protein: ENSMUSP00000122850
Gene: ENSMUSG00000092544

DomainStartEndE-ValueType
KRAB 16 73 1.96e-17 SMART
PDB:2I13|B 104 210 3e-6 PDB
SCOP:d1fgja_ 114 216 2e-6 SMART
Blast:KRAB 189 209 3e-6 BLAST
Predicted Effect probably null
Transcript: ENSMUST00000130458
AA Change: C270*
SMART Domains Protein: ENSMUSP00000119087
Gene: ENSMUSG00000092260
AA Change: C270*

DomainStartEndE-ValueType
KRAB 4 61 1.96e-17 SMART
ZnF_C2H2 162 184 7.37e1 SMART
ZnF_C2H2 213 235 1.69e-3 SMART
ZnF_C2H2 240 262 8.47e-4 SMART
ZnF_C2H2 268 290 7.15e-2 SMART
ZnF_C2H2 296 318 3.83e-2 SMART
ZnF_C2H2 324 346 4.17e-3 SMART
ZnF_C2H2 352 374 5.99e-4 SMART
Predicted Effect probably null
Transcript: ENSMUST00000149782
AA Change: C212*
SMART Domains Protein: ENSMUSP00000123252
Gene: ENSMUSG00000092544
AA Change: C212*

DomainStartEndE-ValueType
KRAB 80 139 1.2e-17 SMART
ZnF_C2H2 155 177 1.69e-3 SMART
ZnF_C2H2 182 204 8.47e-4 SMART
ZnF_C2H2 210 232 7.15e-2 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000154063
SMART Domains Protein: ENSMUSP00000117867
Gene: ENSMUSG00000092260

DomainStartEndE-ValueType
KRAB 4 61 1.96e-17 SMART
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 23 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Ablim1 T C 19: 57,152,290 E142G possibly damaging Het
Arid4a C T 12: 71,075,718 P958S probably damaging Het
BC049730 A G 7: 24,714,248 T230A probably benign Het
Cct5 T C 15: 31,590,927 probably benign Het
Cntnap4 C T 8: 112,767,619 probably benign Het
Col4a3 C T 1: 82,717,869 L1597F probably damaging Het
Gla C A X: 134,595,198 V179L probably benign Het
Hace1 T A 10: 45,672,357 Y14* probably null Het
Hcfc2 T A 10: 82,741,278 probably null Het
Helz2 T C 2: 181,232,245 D2152G possibly damaging Het
Mcm8 T G 2: 132,819,674 L74V probably benign Het
Myo18b A G 5: 112,830,389 probably benign Het
Ptprg A T 14: 12,215,265 N1084I probably damaging Het
Rad21l C A 2: 151,660,715 A192S probably benign Het
Scn2a A G 2: 65,670,734 D80G probably damaging Het
Serpinb3c A G 1: 107,276,260 probably null Het
Sgip1 A G 4: 102,928,921 probably benign Het
Slc25a41 G T 17: 57,034,957 probably null Het
Snx14 C A 9: 88,420,329 R140S probably damaging Het
Svs6 A C 2: 164,317,587 K90T possibly damaging Het
Tlcd1 T A 11: 78,180,088 Y168N probably damaging Het
Vps13d A G 4: 145,085,408 I3312T probably benign Het
Zfp11 A G 5: 129,657,914 V161A probably benign Het
Other mutations in Gm20422
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01103:Gm20422 APN 8 69743126 missense possibly damaging 0.71
IGL03326:Gm20422 APN 8 69766698 missense possibly damaging 0.53
R0238:Gm20422 UTSW 8 69766715 missense probably damaging 1.00
Posted On2012-12-06