Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL01780:Vmn1r195'

154159

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Vmn1r195

Ensembl Gene

ENSMUSG00000069296

Gene Name

vomeronasal 1 receptor 195

Synonyms

V1ri6

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.052) question?

Stock #

IGL01780

Quality Score

Status

Chromosome

Chromosomal Location

22462487-22463574 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 22463255 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Alanine at position 242 (T242A)

Ref Sequence

ENSEMBL: ENSMUSP00000154274 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000091736] [ENSMUST00000228711]

AlphaFold

Q5SVD6

Predicted Effect

probably benign
Transcript: ENSMUST00000091736
AA Change: T242A

PolyPhen 2 Score 0.338 (Sensitivity: 0.90; Specificity: 0.89)

SMART Domains

Protein: ENSMUSP00000089330
Gene: ENSMUSG00000069296
AA Change: T242A

Domain	Start	End	E-Value	Type
transmembrane domain	10	32	N/A	INTRINSIC
Pfam:V1R	34	300	5.6e-41	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000121379

Predicted Effect

probably benign
Transcript: ENSMUST00000228711
AA Change: T242A

PolyPhen 2 Score 0.338 (Sensitivity: 0.90; Specificity: 0.89)

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 40 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abhd8	A	G	8: 71,914,121 (GRCm39)	V169A	probably benign	Het
Aopep	A	G	13: 63,357,939 (GRCm39)	N648D	probably benign	Het
BC024139	C	A	15: 76,005,343 (GRCm39)	L506F	probably benign	Het
Bltp3a	T	C	17: 28,112,474 (GRCm39)	L1221P	probably damaging	Het
Cfap65	A	T	1: 74,967,507 (GRCm39)	C190*	probably null	Het
Cib2	A	T	9: 54,457,170 (GRCm39)	H31Q	probably damaging	Het
Emb	A	G	13: 117,386,007 (GRCm39)		probably benign	Het
Eml6	T	C	11: 29,755,175 (GRCm39)	M867V	probably benign	Het
Flnc	A	T	6: 29,438,492 (GRCm39)	K129*	probably null	Het
Gckr	C	A	5: 31,465,134 (GRCm39)	H368N	possibly damaging	Het
Gmds	A	T	13: 32,409,145 (GRCm39)	Y106*	probably null	Het
Homez	T	C	14: 55,095,355 (GRCm39)	T118A	probably damaging	Het
Kcnh7	G	A	2: 62,667,507 (GRCm39)	T344I	probably benign	Het
Kcnt2	A	G	1: 140,279,007 (GRCm39)	I53V	probably benign	Het
Krt13	A	T	11: 100,010,539 (GRCm39)	L207Q	probably damaging	Het
Lipo2	A	G	19: 33,708,348 (GRCm39)	L222P	possibly damaging	Het
Lrp2	A	C	2: 69,316,528 (GRCm39)	V2151G	possibly damaging	Het
Mrc2	A	G	11: 105,216,547 (GRCm39)	D112G	probably damaging	Het
Mrgpra6	T	C	7: 46,838,497 (GRCm39)	T234A	probably damaging	Het
Mroh2b	A	G	15: 4,941,482 (GRCm39)	N338S	probably benign	Het
Mrpl23	T	A	7: 142,089,802 (GRCm39)		probably benign	Het
Myo18a	A	G	11: 77,741,073 (GRCm39)	N1442S	probably benign	Het
Nxn	A	G	11: 76,165,480 (GRCm39)		probably benign	Het
Or8w1	T	C	2: 87,465,424 (GRCm39)	I222M	possibly damaging	Het
Osmr	A	T	15: 6,858,144 (GRCm39)	N441K	probably benign	Het
Patl2	A	C	2: 121,952,327 (GRCm39)	S468R	probably damaging	Het
Pcdhb1	T	C	18: 37,399,575 (GRCm39)	S509P	probably damaging	Het
Pmp22	G	T	11: 63,049,134 (GRCm39)	V126F	probably benign	Het
Prom1	A	G	5: 44,186,946 (GRCm39)		probably benign	Het
Prss1	C	A	6: 41,440,139 (GRCm39)	Q159K	probably damaging	Het
Psd3	G	T	8: 68,416,521 (GRCm39)	H459N	probably benign	Het
Rasgrp1	A	G	2: 117,115,359 (GRCm39)	L743P	probably benign	Het
Rpusd4	G	A	9: 35,179,720 (GRCm39)	R71Q	probably damaging	Het
Rsf1	C	T	7: 97,313,977 (GRCm39)		probably benign	Het
Scaf11	T	C	15: 96,318,725 (GRCm39)	T280A	possibly damaging	Het
Slc16a4	A	G	3: 107,210,415 (GRCm39)	I362V	probably benign	Het
Syt16	T	C	12: 74,313,616 (GRCm39)	V514A	probably benign	Het
Tdpoz2	A	G	3: 93,559,735 (GRCm39)	V79A	possibly damaging	Het
Tenm2	A	G	11: 35,937,768 (GRCm39)	M1635T	probably benign	Het
Zfp423	A	G	8: 88,508,136 (GRCm39)	V736A	probably damaging	Het

Other mutations in Vmn1r195

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01751:Vmn1r195	APN	13	22,463,421 (GRCm39)	missense	probably benign	0.45
IGL01752:Vmn1r195	APN	13	22,463,421 (GRCm39)	missense	probably benign	0.45
PIT4812001:Vmn1r195	UTSW	13	22,463,033 (GRCm39)	missense	probably benign	0.22
R0066:Vmn1r195	UTSW	13	22,463,409 (GRCm39)	missense	possibly damaging	0.94
R0066:Vmn1r195	UTSW	13	22,463,409 (GRCm39)	missense	possibly damaging	0.94
R0350:Vmn1r195	UTSW	13	22,463,403 (GRCm39)	missense	probably damaging	0.99
R0639:Vmn1r195	UTSW	13	22,463,111 (GRCm39)	missense	probably damaging	1.00
R0751:Vmn1r195	UTSW	13	22,463,181 (GRCm39)	missense	probably damaging	1.00
R1184:Vmn1r195	UTSW	13	22,463,181 (GRCm39)	missense	probably damaging	1.00
R1464:Vmn1r195	UTSW	13	22,463,348 (GRCm39)	missense	probably benign	0.01
R1464:Vmn1r195	UTSW	13	22,463,348 (GRCm39)	missense	probably benign	0.01
R1999:Vmn1r195	UTSW	13	22,462,934 (GRCm39)	missense	possibly damaging	0.83
R2150:Vmn1r195	UTSW	13	22,462,934 (GRCm39)	missense	possibly damaging	0.83
R4924:Vmn1r195	UTSW	13	22,463,189 (GRCm39)	missense	probably benign	0.03
R5190:Vmn1r195	UTSW	13	22,462,556 (GRCm39)	nonsense	probably null
R5522:Vmn1r195	UTSW	13	22,463,120 (GRCm39)	missense	probably damaging	1.00
R5621:Vmn1r195	UTSW	13	22,462,559 (GRCm39)	missense	probably benign	0.01
R6509:Vmn1r195	UTSW	13	22,463,279 (GRCm39)	missense	probably benign	0.45
R7288:Vmn1r195	UTSW	13	22,463,174 (GRCm39)	missense	probably damaging	1.00
R7291:Vmn1r195	UTSW	13	22,462,919 (GRCm39)	missense	probably damaging	1.00
R7428:Vmn1r195	UTSW	13	22,463,022 (GRCm39)	missense	probably benign	0.01
R7810:Vmn1r195	UTSW	13	22,463,244 (GRCm39)	missense	probably damaging	1.00
R8704:Vmn1r195	UTSW	13	22,463,058 (GRCm39)	missense	possibly damaging	0.93
R8916:Vmn1r195	UTSW	13	22,463,139 (GRCm39)	missense	probably damaging	1.00
R9125:Vmn1r195	UTSW	13	22,463,335 (GRCm39)	missense	possibly damaging	0.90
R9255:Vmn1r195	UTSW	13	22,463,342 (GRCm39)	missense	possibly damaging	0.79
R9390:Vmn1r195	UTSW	13	22,462,535 (GRCm39)	missense	probably benign	0.22
R9802:Vmn1r195	UTSW	13	22,463,273 (GRCm39)	missense	probably damaging	1.00

Posted On

2014-02-04