Incidental Mutation 'IGL01829:Csn1s2a'
ID154737
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Csn1s2a
Ensembl Gene ENSMUSG00000061937
Gene Namecasein alpha s2-like A
SynonymsCsn1s2a, Csng
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.106) question?
Stock #IGL01829
Quality Score
Status
Chromosome5
Chromosomal Location87774567-87788797 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to T at 87786710 bp
ZygosityHeterozygous
Amino Acid Change Threonine to Serine at position 173 (T173S)
Ref Sequence ENSEMBL: ENSMUSP00000142901 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000076379] [ENSMUST00000196585] [ENSMUST00000196749] [ENSMUST00000200322]
Predicted Effect unknown
Transcript: ENSMUST00000076379
AA Change: T181S
SMART Domains Protein: ENSMUSP00000075716
Gene: ENSMUSG00000061937
AA Change: T181S

DomainStartEndE-ValueType
low complexity region 23 31 N/A INTRINSIC
coiled coil region 58 86 N/A INTRINSIC
low complexity region 102 115 N/A INTRINSIC
Predicted Effect unknown
Transcript: ENSMUST00000196585
AA Change: T166S
SMART Domains Protein: ENSMUSP00000143515
Gene: ENSMUSG00000061937
AA Change: T166S

DomainStartEndE-ValueType
low complexity region 23 31 N/A INTRINSIC
low complexity region 51 80 N/A INTRINSIC
low complexity region 87 100 N/A INTRINSIC
Predicted Effect unknown
Transcript: ENSMUST00000196749
AA Change: T180S
SMART Domains Protein: ENSMUSP00000143715
Gene: ENSMUSG00000061937
AA Change: T180S

DomainStartEndE-ValueType
low complexity region 23 31 N/A INTRINSIC
coiled coil region 57 85 N/A INTRINSIC
low complexity region 101 114 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000199200
Predicted Effect noncoding transcript
Transcript: ENSMUST00000200200
Predicted Effect unknown
Transcript: ENSMUST00000200322
AA Change: T173S
SMART Domains Protein: ENSMUSP00000142901
Gene: ENSMUSG00000061937
AA Change: T173S

DomainStartEndE-ValueType
low complexity region 23 31 N/A INTRINSIC
low complexity region 51 57 N/A INTRINSIC
low complexity region 72 87 N/A INTRINSIC
low complexity region 94 107 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000200350
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 24 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Bod1l A G 5: 41,820,468 S1168P probably benign Het
Dchs1 T A 7: 105,755,397 D2646V probably damaging Het
Dennd4a C T 9: 64,842,561 R145* probably null Het
Dnah7a G T 1: 53,618,068 R850S possibly damaging Het
Dock2 T C 11: 34,705,841 D396G probably damaging Het
E2f7 A G 10: 110,779,094 Y553C probably benign Het
Elf2 A G 3: 51,308,100 M63T probably damaging Het
Hydin A C 8: 110,589,522 T4349P possibly damaging Het
Kcnk13 T A 12: 100,060,998 probably benign Het
Nr1h5 T A 3: 102,949,079 I295L probably benign Het
Olfr1413 A T 1: 92,573,329 I53F probably benign Het
Ptprk A G 10: 28,573,387 H986R probably damaging Het
Rufy1 T A 11: 50,416,244 R300* probably null Het
Sfxn4 C A 19: 60,858,734 S37I probably damaging Het
Slc12a9 A T 5: 137,327,365 probably benign Het
Slc37a1 T C 17: 31,322,206 I224T possibly damaging Het
Slc6a6 T C 6: 91,735,189 F233S probably damaging Het
Stard9 A G 2: 120,706,446 K4233E possibly damaging Het
Trp53bp1 A T 2: 121,215,896 M1141K probably benign Het
Ttn T C 2: 76,781,667 D17297G probably damaging Het
Vmn1r12 T C 6: 57,159,664 Y205H probably damaging Het
Vmn1r77 A G 7: 12,041,431 K45E probably damaging Het
Vmn2r-ps159 T C 4: 156,333,319 noncoding transcript Het
Vps13a T C 19: 16,619,443 T3104A probably benign Het
Other mutations in Csn1s2a
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00985:Csn1s2a APN 5 87784580 missense possibly damaging 0.83
R0137:Csn1s2a UTSW 5 87778967 missense possibly damaging 0.46
R1503:Csn1s2a UTSW 5 87775799 missense possibly damaging 0.66
R1799:Csn1s2a UTSW 5 87778193 missense probably damaging 0.97
R1870:Csn1s2a UTSW 5 87778199 missense probably benign 0.27
R2400:Csn1s2a UTSW 5 87780155 critical splice donor site probably null
R2897:Csn1s2a UTSW 5 87781821 missense unknown
R4034:Csn1s2a UTSW 5 87781887 missense probably benign 0.27
R4360:Csn1s2a UTSW 5 87781841 missense possibly damaging 0.46
R4377:Csn1s2a UTSW 5 87775821 missense probably benign
R4834:Csn1s2a UTSW 5 87781778 missense probably benign 0.27
R4965:Csn1s2a UTSW 5 87781838 missense possibly damaging 0.83
R6807:Csn1s2a UTSW 5 87781872 missense probably benign
Posted On2014-02-04