Incidental Mutation 'IGL01831:Gm20507'
ID |
154790 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Gm20507
|
Ensembl Gene |
ENSMUSG00000092412 |
Gene Name |
predicted gene 20507 |
Synonyms |
|
Accession Numbers |
|
Essential gene? |
Not available
|
Stock # |
IGL01831
|
Quality Score |
|
Status
|
|
Chromosome |
17 |
Chromosomal Location |
33849733-33864679 bp(+) (GRCm39) |
Type of Mutation |
unclassified |
DNA Base Change (assembly) |
T to C
at 33861038 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Ref Sequence |
ENSEMBL: ENSMUSP00000120115
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000052079]
[ENSMUST00000087582]
[ENSMUST00000114385]
[ENSMUST00000116619]
[ENSMUST00000139302]
[ENSMUST00000148178]
|
AlphaFold |
no structure available at present |
Predicted Effect |
probably benign
Transcript: ENSMUST00000052079
|
SMART Domains |
Protein: ENSMUSP00000057065 Gene: ENSMUSG00000032739
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
15 |
151 |
3.3e-6 |
PROSPERO |
internal_repeat_1
|
237 |
378 |
3.3e-6 |
PROSPERO |
low complexity region
|
393 |
404 |
N/A |
INTRINSIC |
low complexity region
|
445 |
453 |
N/A |
INTRINSIC |
low complexity region
|
458 |
471 |
N/A |
INTRINSIC |
low complexity region
|
480 |
486 |
N/A |
INTRINSIC |
SH3
|
581 |
655 |
1.09e0 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000087582
|
SMART Domains |
Protein: ENSMUSP00000084864 Gene: ENSMUSG00000059208
Domain | Start | End | E-Value | Type |
low complexity region
|
2 |
13 |
N/A |
INTRINSIC |
Pfam:HnRNP_M
|
40 |
69 |
2.7e-20 |
PFAM |
RRM
|
71 |
144 |
2.35e-20 |
SMART |
RRM
|
165 |
237 |
1.66e-20 |
SMART |
low complexity region
|
257 |
274 |
N/A |
INTRINSIC |
low complexity region
|
307 |
321 |
N/A |
INTRINSIC |
low complexity region
|
350 |
356 |
N/A |
INTRINSIC |
Blast:AAA
|
430 |
589 |
2e-50 |
BLAST |
low complexity region
|
590 |
603 |
N/A |
INTRINSIC |
RRM
|
614 |
685 |
1.51e-23 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000114385
|
SMART Domains |
Protein: ENSMUSP00000110027 Gene: ENSMUSG00000059208
Domain | Start | End | E-Value | Type |
low complexity region
|
2 |
13 |
N/A |
INTRINSIC |
Pfam:HnRNP_M
|
40 |
69 |
1.5e-20 |
PFAM |
RRM
|
71 |
144 |
2.35e-20 |
SMART |
low complexity region
|
164 |
175 |
N/A |
INTRINSIC |
low complexity region
|
176 |
193 |
N/A |
INTRINSIC |
RRM
|
204 |
276 |
1.66e-20 |
SMART |
low complexity region
|
296 |
313 |
N/A |
INTRINSIC |
internal_repeat_2
|
332 |
432 |
3.9e-5 |
PROSPERO |
internal_repeat_2
|
479 |
581 |
3.9e-5 |
PROSPERO |
low complexity region
|
591 |
602 |
N/A |
INTRINSIC |
low complexity region
|
606 |
616 |
N/A |
INTRINSIC |
low complexity region
|
629 |
642 |
N/A |
INTRINSIC |
internal_repeat_1
|
643 |
676 |
1.39e-5 |
PROSPERO |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000116619
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000130946
|
SMART Domains |
Protein: ENSMUSP00000116671 Gene: ENSMUSG00000059208
Domain | Start | End | E-Value | Type |
low complexity region
|
28 |
42 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000139302
|
SMART Domains |
Protein: ENSMUSP00000115787 Gene: ENSMUSG00000059208
Domain | Start | End | E-Value | Type |
low complexity region
|
2 |
13 |
N/A |
INTRINSIC |
Pfam:HnRNP_M
|
40 |
69 |
1.4e-20 |
PFAM |
RRM
|
71 |
144 |
2.35e-20 |
SMART |
RRM
|
165 |
237 |
1.66e-20 |
SMART |
low complexity region
|
257 |
274 |
N/A |
INTRINSIC |
low complexity region
|
307 |
321 |
N/A |
INTRINSIC |
low complexity region
|
350 |
356 |
N/A |
INTRINSIC |
Blast:AAA
|
430 |
589 |
8e-51 |
BLAST |
low complexity region
|
590 |
603 |
N/A |
INTRINSIC |
internal_repeat_1
|
611 |
635 |
5.49e-5 |
PROSPERO |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000163245
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000166215
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000148178
|
SMART Domains |
Protein: ENSMUSP00000120115 Gene: ENSMUSG00000059208
Domain | Start | End | E-Value | Type |
low complexity region
|
2 |
13 |
N/A |
INTRINSIC |
Pfam:HnRNP_M
|
40 |
69 |
2.2e-22 |
PFAM |
RRM
|
71 |
144 |
2.35e-20 |
SMART |
low complexity region
|
164 |
175 |
N/A |
INTRINSIC |
low complexity region
|
176 |
193 |
N/A |
INTRINSIC |
RRM
|
204 |
276 |
1.66e-20 |
SMART |
low complexity region
|
296 |
313 |
N/A |
INTRINSIC |
internal_repeat_2
|
332 |
432 |
6.64e-5 |
PROSPERO |
internal_repeat_2
|
479 |
581 |
6.64e-5 |
PROSPERO |
low complexity region
|
591 |
602 |
N/A |
INTRINSIC |
low complexity region
|
606 |
616 |
N/A |
INTRINSIC |
low complexity region
|
629 |
642 |
N/A |
INTRINSIC |
RRM
|
653 |
724 |
1.51e-23 |
SMART |
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 12 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adgrb2 |
G |
T |
4: 129,903,187 (GRCm39) |
D596Y |
probably damaging |
Het |
Atr |
A |
G |
9: 95,752,807 (GRCm39) |
R626G |
probably benign |
Het |
Edem3 |
T |
C |
1: 151,671,833 (GRCm39) |
F394S |
probably damaging |
Het |
Galk2 |
C |
A |
2: 125,817,277 (GRCm39) |
N344K |
probably benign |
Het |
Igkv2-112 |
A |
T |
6: 68,197,481 (GRCm39) |
Y50F |
possibly damaging |
Het |
Itgb1bp1 |
A |
T |
12: 21,329,469 (GRCm39) |
F2I |
unknown |
Het |
Klhl6 |
C |
T |
16: 19,772,235 (GRCm39) |
C370Y |
probably damaging |
Het |
Or56b1 |
T |
G |
7: 104,285,267 (GRCm39) |
Y129D |
probably damaging |
Het |
Or6c70 |
T |
C |
10: 129,709,900 (GRCm39) |
H242R |
probably damaging |
Het |
Pja2 |
A |
T |
17: 64,616,402 (GRCm39) |
H164Q |
probably benign |
Het |
Plau |
T |
A |
14: 20,887,838 (GRCm39) |
|
probably benign |
Het |
Snx4 |
C |
T |
16: 33,104,792 (GRCm39) |
R247* |
probably null |
Het |
|
Other mutations in Gm20507 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01161:Gm20507
|
APN |
17 |
33,863,727 (GRCm39) |
unclassified |
probably benign |
|
|
Posted On |
2014-02-04 |