Incidental Mutation 'IGL01797:Dctn2'
| ID |
155389 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Dctn2
|
| Ensembl Gene |
ENSMUSG00000025410 |
| Gene Name |
dynactin 2 |
| Synonyms |
DCTN-50, C130077D06Rik, 2310042E05Rik, RBP50, p50 |
| Accession Numbers |
|
| Essential gene? |
Essential
(E-score: 1.000)
|
| Stock # |
IGL01797
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
10 |
| Chromosomal Location |
127102237-127117819 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to G
at 127113182 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Aspartic acid to Glycine
at position 244
(D244G)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000026479
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000026476]
[ENSMUST00000026479]
[ENSMUST00000119078]
|
| AlphaFold |
Q99KJ8 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000026476
|
| SMART Domains |
Protein: ENSMUSP00000026476
Gene: ENSMUSG00000025409
| Domain | Start | End | E-Value | Type |
|---|
|
Blast:MBD
|
26 |
79 |
8e-10 |
BLAST |
|
low complexity region
|
80 |
94 |
N/A |
INTRINSIC |
|
low complexity region
|
140 |
155 |
N/A |
INTRINSIC |
|
low complexity region
|
183 |
197 |
N/A |
INTRINSIC |
|
low complexity region
|
212 |
229 |
N/A |
INTRINSIC |
|
low complexity region
|
247 |
262 |
N/A |
INTRINSIC |
|
low complexity region
|
269 |
295 |
N/A |
INTRINSIC |
|
low complexity region
|
311 |
342 |
N/A |
INTRINSIC |
|
low complexity region
|
347 |
378 |
N/A |
INTRINSIC |
|
low complexity region
|
383 |
428 |
N/A |
INTRINSIC |
|
low complexity region
|
442 |
455 |
N/A |
INTRINSIC |
|
low complexity region
|
461 |
498 |
N/A |
INTRINSIC |
|
low complexity region
|
500 |
517 |
N/A |
INTRINSIC |
|
low complexity region
|
533 |
563 |
N/A |
INTRINSIC |
|
low complexity region
|
566 |
634 |
N/A |
INTRINSIC |
|
low complexity region
|
636 |
652 |
N/A |
INTRINSIC |
|
low complexity region
|
653 |
674 |
N/A |
INTRINSIC |
|
low complexity region
|
676 |
686 |
N/A |
INTRINSIC |
|
low complexity region
|
733 |
799 |
N/A |
INTRINSIC |
|
low complexity region
|
815 |
849 |
N/A |
INTRINSIC |
|
low complexity region
|
853 |
890 |
N/A |
INTRINSIC |
|
low complexity region
|
949 |
958 |
N/A |
INTRINSIC |
|
low complexity region
|
978 |
1002 |
N/A |
INTRINSIC |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000026479
AA Change: D244G
PolyPhen 2
Score 0.937 (Sensitivity: 0.80; Specificity: 0.94)
|
| SMART Domains |
Protein: ENSMUSP00000026479
Gene: ENSMUSG00000025410
AA Change: D244G
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Dynamitin
|
16 |
400 |
7.1e-129 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000119078
|
| SMART Domains |
Protein: ENSMUSP00000112805
Gene: ENSMUSG00000025409
| Domain | Start | End | E-Value | Type |
|---|
|
Blast:MBD
|
26 |
79 |
8e-10 |
BLAST |
|
low complexity region
|
80 |
94 |
N/A |
INTRINSIC |
|
low complexity region
|
140 |
155 |
N/A |
INTRINSIC |
|
low complexity region
|
183 |
197 |
N/A |
INTRINSIC |
|
low complexity region
|
212 |
229 |
N/A |
INTRINSIC |
|
low complexity region
|
247 |
262 |
N/A |
INTRINSIC |
|
low complexity region
|
269 |
295 |
N/A |
INTRINSIC |
|
low complexity region
|
311 |
342 |
N/A |
INTRINSIC |
|
low complexity region
|
347 |
378 |
N/A |
INTRINSIC |
|
low complexity region
|
383 |
428 |
N/A |
INTRINSIC |
|
low complexity region
|
442 |
455 |
N/A |
INTRINSIC |
|
low complexity region
|
461 |
498 |
N/A |
INTRINSIC |
|
low complexity region
|
500 |
517 |
N/A |
INTRINSIC |
|
low complexity region
|
533 |
563 |
N/A |
INTRINSIC |
|
low complexity region
|
566 |
634 |
N/A |
INTRINSIC |
|
low complexity region
|
636 |
652 |
N/A |
INTRINSIC |
|
low complexity region
|
653 |
674 |
N/A |
INTRINSIC |
|
low complexity region
|
676 |
686 |
N/A |
INTRINSIC |
|
low complexity region
|
733 |
798 |
N/A |
INTRINSIC |
|
low complexity region
|
813 |
847 |
N/A |
INTRINSIC |
|
low complexity region
|
851 |
888 |
N/A |
INTRINSIC |
|
low complexity region
|
947 |
956 |
N/A |
INTRINSIC |
|
low complexity region
|
976 |
1000 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000126243
|
| SMART Domains |
Protein: ENSMUSP00000115238
Gene: ENSMUSG00000025409
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
1 |
26 |
N/A |
INTRINSIC |
|
low complexity region
|
31 |
76 |
N/A |
INTRINSIC |
|
low complexity region
|
90 |
103 |
N/A |
INTRINSIC |
|
low complexity region
|
109 |
146 |
N/A |
INTRINSIC |
|
low complexity region
|
148 |
165 |
N/A |
INTRINSIC |
|
low complexity region
|
181 |
211 |
N/A |
INTRINSIC |
|
low complexity region
|
214 |
282 |
N/A |
INTRINSIC |
|
low complexity region
|
284 |
300 |
N/A |
INTRINSIC |
|
low complexity region
|
301 |
322 |
N/A |
INTRINSIC |
|
low complexity region
|
324 |
334 |
N/A |
INTRINSIC |
|
low complexity region
|
381 |
446 |
N/A |
INTRINSIC |
|
low complexity region
|
462 |
496 |
N/A |
INTRINSIC |
|
low complexity region
|
500 |
537 |
N/A |
INTRINSIC |
|
low complexity region
|
596 |
610 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000136169
|
| SMART Domains |
Protein: ENSMUSP00000122504
Gene: ENSMUSG00000025409
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
55 |
64 |
N/A |
INTRINSIC |
|
low complexity region
|
84 |
108 |
N/A |
INTRINSIC |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000218556
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000218752
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000220418
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a 50-kD subunit of dynactin, a macromolecular complex consisting of 10-11 subunits ranging in size from 22 to 150 kD. Dynactin binds to both microtubules and cytoplasmic dynein. It is involved in a diverse array of cellular functions, including ER-to-Golgi transport, the centripetal movement of lysosomes and endosomes, spindle formation, chromosome movement, nuclear positioning, and axonogenesis. This subunit is present in 4-5 copies per dynactin molecule. It contains three short alpha-helical coiled-coil domains that may mediate association with self or other dynactin subunits. It may interact directly with the largest subunit (p150) of dynactin and may affix p150 in place. Multiple alternatively spliced transcript variants encoding distinct isoforms have been found for this gene. [provided by RefSeq, May 2012]
|
| Allele List at MGI |
All alleles(28) : Targeted(3) Gene trapped(25)
|
| Other mutations in this stock |
Total: 31 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abca16 |
T |
C |
7: 120,113,760 (GRCm39) |
V877A |
probably benign |
Het |
| Clcn2 |
T |
C |
16: 20,531,511 (GRCm39) |
I178V |
probably damaging |
Het |
| Cnbp |
A |
G |
6: 87,822,542 (GRCm39) |
|
probably benign |
Het |
| Coq8a |
A |
T |
1: 179,997,284 (GRCm39) |
|
probably null |
Het |
| Dync1h1 |
T |
A |
12: 110,618,630 (GRCm39) |
|
probably null |
Het |
| Efcab15 |
T |
C |
11: 103,089,794 (GRCm39) |
Y381C |
probably damaging |
Het |
| Faiml |
T |
C |
9: 99,116,442 (GRCm39) |
K83E |
probably damaging |
Het |
| Fdx1 |
A |
T |
9: 51,854,925 (GRCm39) |
C159* |
probably null |
Het |
| Fgd3 |
A |
T |
13: 49,443,065 (GRCm39) |
V169E |
probably damaging |
Het |
| Ice1 |
G |
T |
13: 70,772,065 (GRCm39) |
T51K |
probably damaging |
Het |
| Iqca1 |
A |
C |
1: 90,072,541 (GRCm39) |
|
probably null |
Het |
| Jup |
C |
A |
11: 100,272,498 (GRCm39) |
|
probably benign |
Het |
| Krt84 |
A |
G |
15: 101,436,915 (GRCm39) |
V373A |
possibly damaging |
Het |
| Ndst4 |
T |
A |
3: 125,476,802 (GRCm39) |
M9K |
probably damaging |
Het |
| Nomo1 |
T |
C |
7: 45,706,086 (GRCm39) |
V480A |
probably damaging |
Het |
| Nsun5 |
A |
G |
5: 135,404,225 (GRCm39) |
H344R |
probably damaging |
Het |
| Or13a21 |
A |
G |
7: 139,998,931 (GRCm39) |
Y252H |
probably damaging |
Het |
| Or1e1f |
A |
T |
11: 73,855,644 (GRCm39) |
D70V |
probably damaging |
Het |
| Pjvk |
T |
C |
2: 76,487,883 (GRCm39) |
|
probably benign |
Het |
| Prkaa1 |
G |
A |
15: 5,198,187 (GRCm39) |
D159N |
probably damaging |
Het |
| Sap130 |
T |
A |
18: 31,831,721 (GRCm39) |
I736N |
probably damaging |
Het |
| Tlcd1 |
A |
G |
11: 78,071,160 (GRCm39) |
|
probably null |
Het |
| Tpp1 |
T |
C |
7: 105,398,459 (GRCm39) |
I286V |
probably benign |
Het |
| Ttll5 |
T |
A |
12: 86,003,371 (GRCm39) |
I1069K |
possibly damaging |
Het |
| Ttn |
T |
G |
2: 76,540,257 (GRCm39) |
E34243A |
possibly damaging |
Het |
| Uqcr10 |
A |
C |
11: 4,654,179 (GRCm39) |
I43S |
possibly damaging |
Het |
| Ush2a |
T |
A |
1: 187,995,706 (GRCm39) |
M159K |
probably damaging |
Het |
| Vmn2r121 |
G |
A |
X: 123,041,048 (GRCm39) |
|
probably benign |
Het |
| Vmn2r30 |
T |
A |
7: 7,337,195 (GRCm39) |
D147V |
probably benign |
Het |
| Xntrpc |
T |
C |
7: 101,739,753 (GRCm39) |
I559T |
possibly damaging |
Het |
| Zfp268 |
T |
A |
4: 145,347,241 (GRCm39) |
N48K |
probably damaging |
Het |
|
| Other mutations in Dctn2 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00334:Dctn2
|
APN |
10 |
127,113,559 (GRCm39) |
unclassified |
probably benign |
|
|
IGL01749:Dctn2
|
APN |
10 |
127,117,286 (GRCm39) |
missense |
possibly damaging |
0.47 |
|
IGL02021:Dctn2
|
APN |
10 |
127,110,926 (GRCm39) |
critical splice donor site |
probably null |
|
|
IGL02335:Dctn2
|
APN |
10 |
127,111,690 (GRCm39) |
splice site |
probably benign |
|
|
IGL02748:Dctn2
|
APN |
10 |
127,113,142 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03382:Dctn2
|
APN |
10 |
127,114,057 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R0069:Dctn2
|
UTSW |
10 |
127,113,354 (GRCm39) |
splice site |
probably null |
|
|
R0069:Dctn2
|
UTSW |
10 |
127,113,354 (GRCm39) |
splice site |
probably null |
|
|
R0621:Dctn2
|
UTSW |
10 |
127,113,809 (GRCm39) |
critical splice donor site |
probably null |
|
|
R1114:Dctn2
|
UTSW |
10 |
127,114,011 (GRCm39) |
splice site |
probably null |
|
|
R1917:Dctn2
|
UTSW |
10 |
127,110,918 (GRCm39) |
nonsense |
probably null |
|
|
R2238:Dctn2
|
UTSW |
10 |
127,112,257 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R4097:Dctn2
|
UTSW |
10 |
127,113,362 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4418:Dctn2
|
UTSW |
10 |
127,114,234 (GRCm39) |
missense |
probably benign |
0.24 |
|
R4972:Dctn2
|
UTSW |
10 |
127,112,572 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6873:Dctn2
|
UTSW |
10 |
127,112,105 (GRCm39) |
splice site |
probably null |
|
|
R7533:Dctn2
|
UTSW |
10 |
127,103,347 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
R7557:Dctn2
|
UTSW |
10 |
127,114,273 (GRCm39) |
missense |
probably benign |
0.44 |
|
R7657:Dctn2
|
UTSW |
10 |
127,102,383 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8218:Dctn2
|
UTSW |
10 |
127,112,398 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R8557:Dctn2
|
UTSW |
10 |
127,114,062 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9344:Dctn2
|
UTSW |
10 |
127,114,084 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Posted On |
2014-02-04 |
Incidental Mutation