Incidental Mutation 'IGL01807:Atf1'
ID |
155719 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Atf1
|
Ensembl Gene |
ENSMUSG00000023027 |
Gene Name |
activating transcription factor 1 |
Synonyms |
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
IGL01807
|
Quality Score |
|
Status
|
|
Chromosome |
15 |
Chromosomal Location |
100125729-100159129 bp(+) (GRCm39) |
Type of Mutation |
splice site |
DNA Base Change (assembly) |
T to C
at 100149945 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Ref Sequence |
ENSEMBL: ENSMUSP00000132907
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000023769]
[ENSMUST00000163855]
[ENSMUST00000165804]
[ENSMUST00000168103]
[ENSMUST00000169408]
[ENSMUST00000172154]
[ENSMUST00000171869]
|
AlphaFold |
P81269 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000023769
|
SMART Domains |
Protein: ENSMUSP00000023769 Gene: ENSMUSG00000023027
Domain | Start | End | E-Value | Type |
Pfam:pKID
|
43 |
83 |
3.9e-21 |
PFAM |
BRLZ
|
209 |
266 |
3.28e-10 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000163855
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000165804
|
SMART Domains |
Protein: ENSMUSP00000127969 Gene: ENSMUSG00000023027
Domain | Start | End | E-Value | Type |
Pfam:pKID
|
46 |
76 |
1.9e-19 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000166435
|
SMART Domains |
Protein: ENSMUSP00000127985 Gene: ENSMUSG00000023027
Domain | Start | End | E-Value | Type |
low complexity region
|
76 |
92 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000168103
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000169408
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000172154
|
SMART Domains |
Protein: ENSMUSP00000132907 Gene: ENSMUSG00000023027
Domain | Start | End | E-Value | Type |
Pfam:pKID
|
43 |
83 |
2.5e-20 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000171869
|
SMART Domains |
Protein: ENSMUSP00000131278 Gene: ENSMUSG00000023027
Domain | Start | End | E-Value | Type |
Pfam:pKID
|
43 |
67 |
5.2e-12 |
PFAM |
|
Coding Region Coverage |
|
Validation Efficiency |
|
MGI Phenotype |
PHENOTYPE: Homozygous mutation of this gene does not result in a phenotype. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 31 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abcc9 |
G |
T |
6: 142,551,640 (GRCm39) |
L1223M |
probably damaging |
Het |
Ano7 |
A |
G |
1: 93,330,418 (GRCm39) |
E814G |
possibly damaging |
Het |
Bco2 |
T |
C |
9: 50,457,158 (GRCm39) |
|
probably benign |
Het |
Birc6 |
A |
G |
17: 74,938,032 (GRCm39) |
I2625V |
probably benign |
Het |
Bub1 |
A |
G |
2: 127,654,897 (GRCm39) |
S545P |
probably benign |
Het |
Cacna1i |
T |
A |
15: 80,258,348 (GRCm39) |
I1173N |
probably damaging |
Het |
Ccdc175 |
T |
C |
12: 72,206,616 (GRCm39) |
E210G |
probably benign |
Het |
Ccl2 |
G |
A |
11: 81,926,513 (GRCm39) |
G9D |
possibly damaging |
Het |
Chmp2b |
T |
A |
16: 65,337,091 (GRCm39) |
T189S |
probably benign |
Het |
Col4a1 |
A |
T |
8: 11,297,056 (GRCm39) |
|
probably benign |
Het |
Ecm1 |
A |
G |
3: 95,643,891 (GRCm39) |
S236P |
probably damaging |
Het |
Epha8 |
A |
G |
4: 136,658,993 (GRCm39) |
V887A |
probably benign |
Het |
Fam227a |
T |
C |
15: 79,533,856 (GRCm39) |
M36V |
probably benign |
Het |
Fbxo15 |
T |
A |
18: 84,999,506 (GRCm39) |
|
probably benign |
Het |
Mtmr4 |
A |
G |
11: 87,494,976 (GRCm39) |
I423V |
possibly damaging |
Het |
Ngly1 |
C |
T |
14: 16,290,873 (GRCm38) |
L452F |
probably benign |
Het |
Or52u1 |
T |
A |
7: 104,237,091 (GRCm39) |
W27R |
probably damaging |
Het |
Or5ac15 |
T |
C |
16: 58,939,936 (GRCm39) |
T166A |
possibly damaging |
Het |
Pak2 |
T |
C |
16: 31,856,097 (GRCm39) |
K247E |
probably damaging |
Het |
Pola2 |
A |
G |
19: 6,003,187 (GRCm39) |
|
probably benign |
Het |
Ppp1r9a |
C |
T |
6: 5,158,248 (GRCm39) |
Q1219* |
probably null |
Het |
Rasgrf1 |
T |
C |
9: 89,873,566 (GRCm39) |
I625T |
probably damaging |
Het |
Rpap1 |
T |
C |
2: 119,613,189 (GRCm39) |
T120A |
possibly damaging |
Het |
Scin |
T |
C |
12: 40,134,288 (GRCm39) |
Y252C |
probably damaging |
Het |
Slc5a9 |
A |
T |
4: 111,734,737 (GRCm39) |
*686R |
probably null |
Het |
Smc1b |
T |
A |
15: 84,980,946 (GRCm39) |
D774V |
probably damaging |
Het |
Uba6 |
C |
T |
5: 86,270,270 (GRCm39) |
R838Q |
probably damaging |
Het |
Ulk4 |
A |
G |
9: 121,084,251 (GRCm39) |
S105P |
probably damaging |
Het |
Vwa3a |
G |
A |
7: 120,374,729 (GRCm39) |
|
probably null |
Het |
Xirp2 |
A |
G |
2: 67,345,375 (GRCm39) |
T2539A |
probably benign |
Het |
Zfpm2 |
T |
C |
15: 40,616,452 (GRCm39) |
|
probably null |
Het |
|
Other mutations in Atf1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL02172:Atf1
|
APN |
15 |
100,152,322 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02718:Atf1
|
APN |
15 |
100,152,100 (GRCm39) |
missense |
probably damaging |
1.00 |
R0426:Atf1
|
UTSW |
15 |
100,130,708 (GRCm39) |
missense |
possibly damaging |
0.66 |
R1393:Atf1
|
UTSW |
15 |
100,130,647 (GRCm39) |
missense |
possibly damaging |
0.66 |
R1965:Atf1
|
UTSW |
15 |
100,152,052 (GRCm39) |
missense |
probably benign |
0.12 |
R1968:Atf1
|
UTSW |
15 |
100,152,395 (GRCm39) |
critical splice donor site |
probably null |
|
R4913:Atf1
|
UTSW |
15 |
100,149,979 (GRCm39) |
splice site |
probably null |
|
R5837:Atf1
|
UTSW |
15 |
100,152,265 (GRCm39) |
missense |
probably damaging |
1.00 |
R6064:Atf1
|
UTSW |
15 |
100,150,029 (GRCm39) |
missense |
probably benign |
0.24 |
R6230:Atf1
|
UTSW |
15 |
100,130,705 (GRCm39) |
missense |
possibly damaging |
0.46 |
R7625:Atf1
|
UTSW |
15 |
100,152,158 (GRCm39) |
splice site |
probably null |
|
R8094:Atf1
|
UTSW |
15 |
100,143,170 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Posted On |
2014-02-04 |