Mutagenetix > Incidental Mutation

Incidental Mutation 'R1373:Txlnb'

157410

Institutional Source

Beutler Lab

Gene Symbol

Txlnb

Ensembl Gene

ENSMUSG00000039891

Gene Name

taxilin beta

Synonyms

Mdp77, 2310001N14Rik

MMRRC Submission

039437-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.067) question?

Stock #

R1373 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

17671974-17721413 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 17714695 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Alanine at position 376 (T376A)

Ref Sequence

ENSEMBL: ENSMUSP00000044936 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000037964]

AlphaFold

Q8VBT1

Predicted Effect

probably damaging
Transcript: ENSMUST00000037964
AA Change: T376A

PolyPhen 2 Score 0.996 (Sensitivity: 0.55; Specificity: 0.98)

SMART Domains

Protein: ENSMUSP00000044936
Gene: ENSMUSG00000039891
AA Change: T376A

Domain	Start	End	E-Value	Type
internal_repeat_2	5	22	2.13e-6	PROSPERO
internal_repeat_1	25	93	4.27e-8	PROSPERO
low complexity region	115	128	N/A	INTRINSIC
Pfam:Taxilin	145	454	3.1e-122	PFAM
low complexity region	477	491	N/A	INTRINSIC
internal_repeat_2	543	560	2.13e-6	PROSPERO
low complexity region	575	591	N/A	INTRINSIC
internal_repeat_1	600	659	4.27e-8	PROSPERO

Meta Mutation Damage Score

0.5816

Coding Region Coverage

1x: 99.3%
3x: 98.5%
10x: 97.0%
20x: 95.2%

Validation Efficiency

94% (34/36)

Allele List at MGI

Other mutations in this stock

Total: 31 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adamdec1	G	A	14: 68,808,400 (GRCm39)	R317C	probably damaging	Het
Adgrl1	T	C	8: 84,664,392 (GRCm39)	V1261A	probably benign	Het
Btla	G	A	16: 45,044,783 (GRCm39)	G23D	probably benign	Het
Card19	T	C	13: 49,357,440 (GRCm39)	D110G	probably damaging	Het
Cbx7	C	T	15: 79,803,074 (GRCm39)	G160R	probably damaging	Het
Ccng2	C	T	5: 93,418,914 (GRCm39)		probably benign	Het
Col4a3	G	A	1: 82,667,808 (GRCm39)		probably benign	Het
Colgalt2	A	G	1: 152,348,912 (GRCm39)	T186A	probably damaging	Het
Cps1	A	G	1: 67,268,583 (GRCm39)	N1437S	possibly damaging	Het
Dcaf1	A	G	9: 106,735,079 (GRCm39)	I676V	probably benign	Het
Dnah5	T	A	15: 28,314,064 (GRCm39)		probably benign	Het
Dock1	T	C	7: 134,768,904 (GRCm39)	S1758P	probably benign	Het
Furin	C	T	7: 80,041,932 (GRCm39)		probably benign	Het
Ice2	G	A	9: 69,314,401 (GRCm39)	R50H	probably benign	Het
Ifi207	T	A	1: 173,557,913 (GRCm39)	D275V	unknown	Het
Nrxn2	C	T	19: 6,522,331 (GRCm39)	T190M	probably damaging	Het
Odad4	T	C	11: 100,436,658 (GRCm39)	F11S	probably damaging	Het
Or14j8	T	C	17: 38,263,251 (GRCm39)	I221M	probably damaging	Het
Or2ag17	C	T	7: 106,389,963 (GRCm39)	V82I	probably benign	Het
Pcnx3	A	G	19: 5,715,544 (GRCm39)	L1494P	probably damaging	Het
Pitrm1	G	T	13: 6,620,736 (GRCm39)	M739I	probably benign	Het
Rbm15	G	T	3: 107,239,946 (GRCm39)	R151S	possibly damaging	Het
Sfr1	C	G	19: 47,723,355 (GRCm39)	D286E	possibly damaging	Het
Slx4	A	G	16: 3,803,374 (GRCm39)	S1147P	probably benign	Het
Sry	C	G	Y: 2,662,864 (GRCm39)	Q265H	unknown	Het
Tgfbr3	T	C	5: 107,362,809 (GRCm39)	I68V	probably benign	Het
Tpmt	A	C	13: 47,180,734 (GRCm39)		probably null	Het
Trpm5	A	G	7: 142,640,579 (GRCm39)		probably benign	Het
Usp25	T	C	16: 76,859,273 (GRCm39)		probably benign	Het
Vmn1r11	G	A	6: 57,114,963 (GRCm39)	C209Y	probably benign	Het
Vps13c	A	T	9: 67,834,793 (GRCm39)	K1707N	probably damaging	Het

Other mutations in Txlnb

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00815:Txlnb	APN	10	17,718,711 (GRCm39)	missense	probably damaging	0.98
IGL01820:Txlnb	APN	10	17,682,606 (GRCm39)	critical splice donor site	probably null
IGL02244:Txlnb	APN	10	17,719,116 (GRCm39)	missense	probably benign	0.00
IGL02247:Txlnb	APN	10	17,717,276 (GRCm39)	splice site	probably benign
IGL02247:Txlnb	APN	10	17,706,090 (GRCm39)	missense	possibly damaging	0.55
IGL02931:Txlnb	APN	10	17,703,730 (GRCm39)	missense	probably damaging	1.00
IGL03006:Txlnb	APN	10	17,714,723 (GRCm39)	missense	probably damaging	0.96
IGL02991:Txlnb	UTSW	10	17,717,201 (GRCm39)	missense	probably damaging	1.00
R0092:Txlnb	UTSW	10	17,718,503 (GRCm39)	missense	possibly damaging	0.91
R0800:Txlnb	UTSW	10	17,675,240 (GRCm39)	missense	possibly damaging	0.50
R0908:Txlnb	UTSW	10	17,674,925 (GRCm39)	missense	probably damaging	1.00
R1172:Txlnb	UTSW	10	17,718,504 (GRCm39)	missense	probably benign	0.23
R1174:Txlnb	UTSW	10	17,718,504 (GRCm39)	missense	probably benign	0.23
R1340:Txlnb	UTSW	10	17,718,488 (GRCm39)	missense	probably damaging	1.00
R1641:Txlnb	UTSW	10	17,682,521 (GRCm39)	missense	possibly damaging	0.55
R1680:Txlnb	UTSW	10	17,718,981 (GRCm39)	missense	probably benign	0.01
R1710:Txlnb	UTSW	10	17,719,203 (GRCm39)	missense	possibly damaging	0.90
R1741:Txlnb	UTSW	10	17,714,695 (GRCm39)	missense	probably damaging	1.00
R1955:Txlnb	UTSW	10	17,675,168 (GRCm39)	missense	probably damaging	0.98
R2031:Txlnb	UTSW	10	17,706,062 (GRCm39)	missense	possibly damaging	0.85
R4300:Txlnb	UTSW	10	17,703,673 (GRCm39)	missense	probably damaging	1.00
R4483:Txlnb	UTSW	10	17,714,745 (GRCm39)	nonsense	probably null
R4484:Txlnb	UTSW	10	17,714,745 (GRCm39)	nonsense	probably null
R4656:Txlnb	UTSW	10	17,691,024 (GRCm39)	missense	probably damaging	1.00
R4664:Txlnb	UTSW	10	17,718,942 (GRCm39)	missense	probably damaging	0.99
R4723:Txlnb	UTSW	10	17,675,015 (GRCm39)	missense	probably benign	0.02
R4974:Txlnb	UTSW	10	17,714,717 (GRCm39)	missense	probably damaging	1.00
R5291:Txlnb	UTSW	10	17,675,144 (GRCm39)	missense	possibly damaging	0.92
R5538:Txlnb	UTSW	10	17,714,657 (GRCm39)	missense	probably damaging	1.00
R5791:Txlnb	UTSW	10	17,674,876 (GRCm39)	missense	probably benign	0.01
R5967:Txlnb	UTSW	10	17,675,168 (GRCm39)	missense	probably damaging	0.98
R6144:Txlnb	UTSW	10	17,718,914 (GRCm39)	missense	probably benign	0.17
R6212:Txlnb	UTSW	10	17,675,057 (GRCm39)	missense	probably damaging	1.00
R7146:Txlnb	UTSW	10	17,703,546 (GRCm39)	missense	possibly damaging	0.81
R7171:Txlnb	UTSW	10	17,718,732 (GRCm39)	missense	probably benign	0.22
R7253:Txlnb	UTSW	10	17,703,633 (GRCm39)	missense	probably damaging	1.00
R7468:Txlnb	UTSW	10	17,675,082 (GRCm39)	missense	probably damaging	0.96
R7608:Txlnb	UTSW	10	17,691,146 (GRCm39)	missense	probably damaging	0.98
R7936:Txlnb	UTSW	10	17,703,712 (GRCm39)	missense	probably benign	0.26
R8245:Txlnb	UTSW	10	17,717,205 (GRCm39)	missense	probably damaging	1.00
R8262:Txlnb	UTSW	10	17,718,752 (GRCm39)	missense	possibly damaging	0.90
R8435:Txlnb	UTSW	10	17,703,544 (GRCm39)	missense	probably damaging	1.00
R8933:Txlnb	UTSW	10	17,682,546 (GRCm39)	missense	probably damaging	0.97
R9218:Txlnb	UTSW	10	17,718,570 (GRCm39)	missense	probably damaging	0.99
R9329:Txlnb	UTSW	10	17,682,594 (GRCm39)	missense	probably damaging	1.00
X0025:Txlnb	UTSW	10	17,675,170 (GRCm39)	missense	probably benign	0.39
Z1177:Txlnb	UTSW	10	17,709,056 (GRCm39)	missense	possibly damaging	0.80
Z1177:Txlnb	UTSW	10	17,703,552 (GRCm39)	missense	probably damaging	1.00
Z1177:Txlnb	UTSW	10	17,682,554 (GRCm39)	missense	probably benign	0.33

Predicted Primers

PCR Primer
(F):5'- CATGTTggggtacaaacatggttggat -3'
(R):5'- CCACTGAAGGTCTCATTCCTGCATT -3'

Sequencing Primer
(F):5'- aagacagacagacagacagac -3'
(R):5'- CCTGCATTATGAAATGCACTGGAG -3'

Posted On

2014-02-18