Incidental Mutation 'R1311:Cd209c'
ID 157934
Institutional Source Beutler Lab
Gene Symbol Cd209c
Ensembl Gene ENSMUSG00000040165
Gene Name CD209c antigen
Synonyms mSIGNR2, SIGNR2
MMRRC Submission 039377-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.120) question?
Stock # R1311 (G1)
Quality Score 225
Status Validated
Chromosome 8
Chromosomal Location 3990222-4004746 bp(-) (GRCm39)
Type of Mutation start codon destroyed
DNA Base Change (assembly) T to A at 3995908 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Methionine to Leucine at position 1 (M1L)
Ref Sequence ENSEMBL: ENSMUSP00000039861 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000044060] [ENSMUST00000208622]
AlphaFold Q91ZW9
Predicted Effect probably benign
Transcript: ENSMUST00000044060
AA Change: M1L

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
SMART Domains Protein: ENSMUSP00000039861
Gene: ENSMUSG00000040165
AA Change: M1L

DomainStartEndE-ValueType
CLECT 48 169 7.66e-30 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000127592
SMART Domains Protein: ENSMUSP00000120433
Gene: ENSMUSG00000040165

DomainStartEndE-ValueType
transmembrane domain 51 73 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000153915
Predicted Effect unknown
Transcript: ENSMUST00000208622
AA Change: M1L
Predicted Effect noncoding transcript
Transcript: ENSMUST00000208902
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 98.8%
  • 3x: 97.7%
  • 10x: 94.1%
  • 20x: 86.2%
Validation Efficiency 98% (42/43)
Allele List at MGI
Other mutations in this stock
Total: 33 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acvr1c T C 2: 58,170,261 (GRCm39) Q449R probably benign Het
Cap1 A G 4: 122,759,007 (GRCm39) Y195H possibly damaging Het
Casp8ap2 T A 4: 32,648,111 (GRCm39) N1939K probably damaging Het
Ckb TCCACCACCA TCCACCA 12: 111,636,079 (GRCm39) probably benign Het
Col13a1 A G 10: 61,699,789 (GRCm39) probably benign Het
Dennd4a T C 9: 64,817,286 (GRCm39) V1640A probably benign Het
Eml6 T C 11: 29,781,088 (GRCm39) probably benign Het
Fat3 G A 9: 15,932,706 (GRCm39) T1409I probably damaging Het
Gm4884 G C 7: 40,692,539 (GRCm39) E169D possibly damaging Het
Gm5709 T C 3: 59,526,100 (GRCm39) noncoding transcript Het
Htr2b C A 1: 86,038,346 (GRCm39) A87S probably damaging Het
Kansl2 G T 15: 98,426,797 (GRCm39) H275N possibly damaging Het
Megf6 G A 4: 154,348,239 (GRCm39) probably null Het
Mtpn A G 6: 35,489,185 (GRCm39) I113T possibly damaging Het
Myh6 G T 14: 55,183,822 (GRCm39) A1704E probably damaging Het
Notum C T 11: 120,546,575 (GRCm39) probably benign Het
Nxpe2 T C 9: 48,237,914 (GRCm39) T114A probably damaging Het
Olfml1 T C 7: 107,167,103 (GRCm39) probably null Het
Or14c41 T A 7: 86,235,161 (GRCm39) V226D probably damaging Het
Ptpn5 A T 7: 46,728,980 (GRCm39) probably benign Het
Rapgef2 A G 3: 78,990,854 (GRCm39) F985L probably benign Het
Slc7a7 A T 14: 54,610,487 (GRCm39) Y386* probably null Het
Snph G T 2: 151,439,122 (GRCm39) P36Q probably damaging Het
St18 T C 1: 6,915,868 (GRCm39) C838R probably damaging Het
Sucla2 C T 14: 73,798,074 (GRCm39) probably benign Het
Supt7l T C 5: 31,677,605 (GRCm39) Y187C probably damaging Het
Sycp2l A T 13: 41,288,661 (GRCm39) K241* probably null Het
Tenm2 G T 11: 35,959,421 (GRCm39) probably benign Het
Tfap4 A G 16: 4,377,290 (GRCm39) probably null Het
Tmem132e T C 11: 82,335,122 (GRCm39) Y643H probably damaging Het
Tmem200c A T 17: 69,147,758 (GRCm39) S114C probably damaging Het
Ush2a T C 1: 188,679,342 (GRCm39) I4850T possibly damaging Het
Zmym6 G T 4: 127,017,151 (GRCm39) L977F probably damaging Het
Other mutations in Cd209c
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00089:Cd209c APN 8 3,990,339 (GRCm39) missense probably damaging 1.00
IGL01340:Cd209c APN 8 3,995,892 (GRCm39) missense probably benign 0.00
IGL02682:Cd209c APN 8 3,990,324 (GRCm39) missense probably damaging 0.99
R1859:Cd209c UTSW 8 3,994,953 (GRCm39) missense probably benign
R4374:Cd209c UTSW 8 4,004,635 (GRCm39) exon noncoding transcript
R4375:Cd209c UTSW 8 4,004,635 (GRCm39) exon noncoding transcript
R4377:Cd209c UTSW 8 4,004,635 (GRCm39) exon noncoding transcript
R4769:Cd209c UTSW 8 3,994,953 (GRCm39) missense probably benign
R4786:Cd209c UTSW 8 3,995,698 (GRCm39) missense possibly damaging 0.77
R4841:Cd209c UTSW 8 3,995,905 (GRCm39) missense probably benign 0.00
R4842:Cd209c UTSW 8 3,995,905 (GRCm39) missense probably benign 0.00
R4869:Cd209c UTSW 8 3,994,077 (GRCm39) missense probably benign 0.00
R5333:Cd209c UTSW 8 3,994,976 (GRCm39) missense probably damaging 1.00
R5835:Cd209c UTSW 8 3,995,699 (GRCm39) missense probably benign 0.01
R6369:Cd209c UTSW 8 3,994,984 (GRCm39) missense probably damaging 1.00
R6497:Cd209c UTSW 8 3,994,122 (GRCm39) missense possibly damaging 0.72
R6591:Cd209c UTSW 8 3,995,680 (GRCm39) missense probably benign 0.14
R6691:Cd209c UTSW 8 3,995,680 (GRCm39) missense probably benign 0.14
R7181:Cd209c UTSW 8 3,995,712 (GRCm39) missense probably benign 0.01
R8067:Cd209c UTSW 8 3,995,700 (GRCm39) missense probably benign 0.12
R8701:Cd209c UTSW 8 3,995,892 (GRCm39) missense probably benign 0.00
R9722:Cd209c UTSW 8 3,995,905 (GRCm39) missense probably benign 0.00
Predicted Primers
Posted On 2014-02-18