Mutagenetix > Incidental Mutation

Incidental Mutation 'R1435:Cnbd1'

159431

Institutional Source

Beutler Lab

Gene Symbol

Cnbd1

Ensembl Gene

ENSMUSG00000073991

Gene Name

cyclic nucleotide binding domain containing 1

Synonyms

MMRRC Submission

039490-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R1435 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

18860454-19122526 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 18907026 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Valine at position 183 (I183V)

Ref Sequence

ENSEMBL: ENSMUSP00000121576 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000137780]

AlphaFold

B1AWM0

Predicted Effect

probably benign
Transcript: ENSMUST00000137780
AA Change: I183V

PolyPhen 2 Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)

SMART Domains

Protein: ENSMUSP00000121576
Gene: ENSMUSG00000073991
AA Change: I183V

Domain	Start	End	E-Value	Type
low complexity region	21	34	N/A	INTRINSIC
Blast:cNMP	166	225	6e-6	BLAST
SCOP:d1cx4a1	296	430	3e-13	SMART
Blast:cNMP	318	429	2e-60	BLAST

Coding Region Coverage

1x: 98.7%
3x: 97.5%
10x: 93.0%
20x: 81.3%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 67 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acadvl	T	G	11: 69,905,642 (GRCm39)	T62P	probably benign	Het
Amz1	A	T	5: 140,733,921 (GRCm39)	N166Y	probably damaging	Het
Anxa6	T	C	11: 54,882,236 (GRCm39)	Q518R	probably benign	Het
Aox3	G	A	1: 58,202,605 (GRCm39)		probably null	Het
Arid1a	C	T	4: 133,408,009 (GRCm39)	R2166Q	unknown	Het
Asb4	T	G	6: 5,398,410 (GRCm39)	I125S	probably benign	Het
Aspscr1	T	C	11: 120,580,048 (GRCm39)	S196P	probably benign	Het
Atxn3	A	G	12: 101,908,460 (GRCm39)	F131L	probably benign	Het
B3gnt5	T	A	16: 19,587,924 (GRCm39)	Y48N	probably damaging	Het
Bglap3	A	G	3: 88,276,453 (GRCm39)	M35T	possibly damaging	Het
Cabp1	A	T	5: 115,311,267 (GRCm39)	D79E	probably damaging	Het
Cemip2	A	T	19: 21,822,070 (GRCm39)	Q1155L	probably benign	Het
Chd2	C	T	7: 73,102,884 (GRCm39)	R1367Q	probably damaging	Het
Clec5a	T	A	6: 40,561,358 (GRCm39)	Q29L	probably damaging	Het
Cmtr2	T	C	8: 110,947,711 (GRCm39)	L7P	probably benign	Het
Col7a1	G	A	9: 108,792,341 (GRCm39)	G1297D	unknown	Het
Csnk1g3	G	A	18: 54,039,746 (GRCm39)		probably null	Het
Cyp4a32	A	T	4: 115,463,863 (GRCm39)	N134I	probably damaging	Het
Cyp4f16	CTATG	CTATGTATG	17: 32,769,708 (GRCm39)		probably null	Het
Dst	G	A	1: 34,153,026 (GRCm39)	V56M	probably damaging	Het
Engase	A	T	11: 118,375,727 (GRCm39)	T32S	probably damaging	Het
Fam117b	T	C	1: 60,008,222 (GRCm39)	I352T	possibly damaging	Het
Golga4	C	A	9: 118,364,508 (GRCm39)	D290E	probably benign	Het
Gtf2a1l	C	A	17: 89,001,743 (GRCm39)	H153N	probably damaging	Het
Hivep1	C	A	13: 42,311,519 (GRCm39)	T1253N	probably damaging	Het
Hps1	T	C	19: 42,750,714 (GRCm39)	S398G	probably benign	Het
Il1r2	T	A	1: 40,144,459 (GRCm39)	F49I	probably damaging	Het
Iqsec1	A	G	6: 90,649,006 (GRCm39)	S808P	probably damaging	Het
Lrrk1	A	G	7: 65,922,776 (GRCm39)	L289P	probably damaging	Het
Magi2	T	A	5: 20,563,943 (GRCm39)	D358E	probably damaging	Het
Man2b2	A	G	5: 36,970,411 (GRCm39)	W832R	probably damaging	Het
Mfsd4a	G	T	1: 131,995,494 (GRCm39)	T46K	probably damaging	Het
N4bp3	G	A	11: 51,535,167 (GRCm39)	R341W	probably damaging	Het
Odad2	T	A	18: 7,222,646 (GRCm39)	H541L	probably benign	Het
Or51f2	T	C	7: 102,526,974 (GRCm39)	S216P	probably damaging	Het
Or8s5	A	T	15: 98,238,209 (GRCm39)	H220Q	possibly damaging	Het
Otof	A	G	5: 30,536,039 (GRCm39)	L1353S	probably benign	Het
Pcsk5	A	T	19: 17,541,246 (GRCm39)	C844*	probably null	Het
Pdk2	T	C	11: 94,922,721 (GRCm39)	Y153C	probably damaging	Het
Pes1	T	C	11: 3,926,075 (GRCm39)	V292A	probably benign	Het
Pex14	T	C	4: 149,047,984 (GRCm39)	T198A	probably benign	Het
Phactr4	G	A	4: 132,104,559 (GRCm39)	T256I	probably benign	Het
Pnpla2	G	A	7: 141,037,324 (GRCm39)	R109H	probably benign	Het
Polh	G	A	17: 46,505,181 (GRCm39)	T145I	probably damaging	Het
Polr3d	A	T	14: 70,677,479 (GRCm39)	V299E	probably benign	Het
Polr3e	C	T	7: 120,540,011 (GRCm39)	T586M	probably benign	Het
Rbm20	T	A	19: 53,802,588 (GRCm39)	F365L	probably benign	Het
Resf1	A	G	6: 149,227,580 (GRCm39)	T209A	probably benign	Het
Rnf213	G	T	11: 119,326,831 (GRCm39)	C1606F	probably damaging	Het
Sipa1l2	A	G	8: 126,195,464 (GRCm39)	V758A	probably damaging	Het
Slc22a16	T	A	10: 40,463,603 (GRCm39)	M451K	probably damaging	Het
Slc28a1	T	C	7: 80,803,265 (GRCm39)	S359P	probably damaging	Het
Slc45a1	G	T	4: 150,728,505 (GRCm39)	F99L	probably damaging	Het
Sp3	A	T	2: 72,768,500 (GRCm39)	N754K	possibly damaging	Het
Taf4b	A	T	18: 14,940,466 (GRCm39)	Q315L	probably damaging	Het
Tcstv2a	T	A	13: 120,725,524 (GRCm39)	W63R	probably damaging	Het
Tmprss15	A	T	16: 78,818,342 (GRCm39)	N544K	probably benign	Het
Tnfsf13b	A	G	8: 10,085,358 (GRCm39)	I283V	probably benign	Het
Tnfsf14	T	A	17: 57,497,605 (GRCm39)	E209V	possibly damaging	Het
Uckl1	T	G	2: 181,214,926 (GRCm39)	S283R	probably benign	Het
Ush1g	T	C	11: 115,209,294 (GRCm39)	D300G	probably damaging	Het
Virma	C	T	4: 11,528,621 (GRCm39)	A1286V	probably damaging	Het
Vmn2r114	ATTT	ATT	17: 23,509,906 (GRCm39)		probably null	Het
Vmn2r59	A	T	7: 41,695,629 (GRCm39)	M261K	possibly damaging	Het
Vwf	A	T	6: 125,619,212 (GRCm39)	K1297*	probably null	Het
Zdbf2	G	A	1: 63,342,199 (GRCm39)	E193K	possibly damaging	Het
Zfp759	T	G	13: 67,286,830 (GRCm39)	I127S	possibly damaging	Het

Other mutations in Cnbd1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00966:Cnbd1	APN	4	18,906,988 (GRCm39)	splice site	probably benign
IGL01101:Cnbd1	APN	4	18,907,098 (GRCm39)	missense	probably benign	0.30
IGL01365:Cnbd1	APN	4	18,860,576 (GRCm39)	missense	probably damaging	1.00
IGL01646:Cnbd1	APN	4	18,895,141 (GRCm39)	nonsense	probably null
IGL02106:Cnbd1	APN	4	18,894,993 (GRCm39)	missense	possibly damaging	0.55
IGL02218:Cnbd1	APN	4	18,887,739 (GRCm39)	missense	probably benign	0.00
IGL02335:Cnbd1	APN	4	19,055,095 (GRCm39)	missense	possibly damaging	0.87
IGL02380:Cnbd1	APN	4	18,887,749 (GRCm39)	critical splice acceptor site	probably null
IGL02380:Cnbd1	APN	4	18,887,748 (GRCm39)	critical splice acceptor site	probably null
IGL02404:Cnbd1	APN	4	18,895,047 (GRCm39)	missense	possibly damaging	0.64
IGL03293:Cnbd1	APN	4	18,860,565 (GRCm39)	missense	possibly damaging	0.65
IGL03301:Cnbd1	APN	4	19,055,039 (GRCm39)	missense	probably benign	0.00
IGL03342:Cnbd1	APN	4	19,098,264 (GRCm39)	splice site	probably benign
IGL03392:Cnbd1	APN	4	18,862,111 (GRCm39)	missense	probably damaging	1.00
R0062:Cnbd1	UTSW	4	18,860,504 (GRCm39)	missense	possibly damaging	0.65
R0062:Cnbd1	UTSW	4	18,860,504 (GRCm39)	missense	possibly damaging	0.65
R0195:Cnbd1	UTSW	4	18,906,988 (GRCm39)	splice site	probably benign
R0462:Cnbd1	UTSW	4	18,895,044 (GRCm39)	missense	probably benign	0.01
R0909:Cnbd1	UTSW	4	19,122,444 (GRCm39)	missense	probably benign
R1995:Cnbd1	UTSW	4	19,055,112 (GRCm39)	missense	possibly damaging	0.55
R2495:Cnbd1	UTSW	4	18,860,579 (GRCm39)	missense	probably damaging	1.00
R3974:Cnbd1	UTSW	4	18,887,693 (GRCm39)	missense	probably benign	0.00
R4083:Cnbd1	UTSW	4	18,886,042 (GRCm39)	missense	possibly damaging	0.88
R4494:Cnbd1	UTSW	4	19,098,150 (GRCm39)	missense	probably benign	0.34
R4558:Cnbd1	UTSW	4	19,055,095 (GRCm39)	missense	possibly damaging	0.87
R4833:Cnbd1	UTSW	4	18,862,120 (GRCm39)	missense	probably damaging	0.97
R5326:Cnbd1	UTSW	4	18,860,517 (GRCm39)	missense	possibly damaging	0.67
R5542:Cnbd1	UTSW	4	18,860,517 (GRCm39)	missense	possibly damaging	0.67
R5930:Cnbd1	UTSW	4	18,886,119 (GRCm39)	missense	probably benign	0.14
R5958:Cnbd1	UTSW	4	18,862,056 (GRCm39)	missense	probably benign	0.31
R6064:Cnbd1	UTSW	4	18,895,084 (GRCm39)	missense	probably benign	0.14
R6250:Cnbd1	UTSW	4	19,098,255 (GRCm39)	missense	probably benign	0.00
R6348:Cnbd1	UTSW	4	18,860,462 (GRCm39)	missense	probably damaging	0.99
R7027:Cnbd1	UTSW	4	18,862,063 (GRCm39)	missense	probably benign	0.01
R7905:Cnbd1	UTSW	4	18,907,100 (GRCm39)	missense	possibly damaging	0.81
R8434:Cnbd1	UTSW	4	19,055,045 (GRCm39)	missense	probably benign	0.00
R9066:Cnbd1	UTSW	4	19,098,181 (GRCm39)	missense	probably benign	0.35
R9098:Cnbd1	UTSW	4	18,886,061 (GRCm39)	nonsense	probably null
R9225:Cnbd1	UTSW	4	18,907,010 (GRCm39)	missense	probably benign	0.08
R9248:Cnbd1	UTSW	4	18,862,113 (GRCm39)	missense	possibly damaging	0.48
R9307:Cnbd1	UTSW	4	18,887,647 (GRCm39)	missense	probably damaging	1.00
R9419:Cnbd1	UTSW	4	19,098,156 (GRCm39)	missense	probably benign	0.11
R9648:Cnbd1	UTSW	4	19,098,142 (GRCm39)	critical splice donor site	probably null

Predicted Primers

PCR Primer
(F):5'- TGAACCATAAGTCTAGGGAATTAAGCCCAT -3'
(R):5'- CCAAAGCATAAAATATGCATCATTGGGGTAAG -3'

Sequencing Primer
(F):5'- tgtctctttacagcaatagaaacc -3'
(R):5'- TGGTGTATCTTATTCTTGGAAACAG -3'

Posted On

2014-03-14