Incidental Mutation 'R1441:Or5ac20'
| ID |
161033 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or5ac20
|
| Ensembl Gene |
ENSMUSG00000048810 |
| Gene Name |
olfactory receptor family 5 subfamily AC member 20 |
| Synonyms |
GA_x54KRFPKG5P-55498766-55497843, Olfr202, MOR182-1 |
| MMRRC Submission |
039496-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.057)
|
| Stock # |
R1441 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
16 |
| Chromosomal Location |
59103935-59104858 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
G to A
at 59104228 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Leucine to Phenylalanine
at position 211
(L211F)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000151058
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000049859]
[ENSMUST00000201687]
[ENSMUST00000217485]
|
| AlphaFold |
Q8VGQ3 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000049859
AA Change: L211F
PolyPhen 2
Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)
|
| SMART Domains |
Protein: ENSMUSP00000059496
Gene: ENSMUSG00000048810
AA Change: L211F
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
307 |
5.9e-47 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
35 |
296 |
1.9e-6 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
1.2e-22 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000201687
AA Change: L211F
PolyPhen 2
Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)
|
| SMART Domains |
Protein: ENSMUSP00000144622
Gene: ENSMUSG00000048810
AA Change: L211F
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
30 |
306 |
3.4e-46 |
PFAM |
|
Pfam:7tm_1
|
40 |
289 |
1.4e-19 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000217485
AA Change: L211F
PolyPhen 2
Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)
|
| Coding Region Coverage |
- 1x: 99.0%
- 3x: 98.1%
- 10x: 95.6%
- 20x: 90.4%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 47 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Adamts18 |
A |
T |
8: 114,481,194 (GRCm39) |
|
probably null |
Het |
| Ankrd16 |
T |
C |
2: 11,783,557 (GRCm39) |
L53P |
probably damaging |
Het |
| Arsk |
A |
T |
13: 76,223,083 (GRCm39) |
N171K |
probably benign |
Het |
| Brwd1 |
A |
C |
16: 95,867,351 (GRCm39) |
C161W |
probably damaging |
Het |
| Card9 |
T |
C |
2: 26,249,402 (GRCm39) |
N53S |
probably benign |
Het |
| Ccdc13 |
A |
T |
9: 121,642,515 (GRCm39) |
V403E |
probably benign |
Het |
| Ccdc83 |
T |
A |
7: 89,893,351 (GRCm39) |
E135D |
probably damaging |
Het |
| Ccser1 |
C |
T |
6: 62,357,016 (GRCm39) |
T818I |
probably benign |
Het |
| Cd44 |
T |
A |
2: 102,676,763 (GRCm39) |
T301S |
probably damaging |
Het |
| Eepd1 |
G |
A |
9: 25,394,499 (GRCm39) |
M254I |
probably benign |
Het |
| Ephb4 |
C |
T |
5: 137,359,509 (GRCm39) |
R360C |
probably damaging |
Het |
| Fam149a |
G |
T |
8: 45,808,684 (GRCm39) |
Q150K |
probably damaging |
Het |
| G6pc2 |
G |
A |
2: 69,051,198 (GRCm39) |
C97Y |
probably damaging |
Het |
| Gcsam |
T |
A |
16: 45,433,401 (GRCm39) |
M15K |
probably benign |
Het |
| Impdh2 |
C |
A |
9: 108,441,975 (GRCm39) |
T201K |
probably benign |
Het |
| Kdm2b |
C |
T |
5: 123,070,943 (GRCm39) |
E379K |
probably benign |
Het |
| Mcm3ap |
T |
C |
10: 76,307,000 (GRCm39) |
V371A |
probably benign |
Het |
| Mink1 |
T |
A |
11: 70,497,940 (GRCm39) |
N514K |
possibly damaging |
Het |
| Mmp12 |
C |
T |
9: 7,354,787 (GRCm39) |
P330L |
probably damaging |
Het |
| Mroh2a |
A |
G |
1: 88,169,353 (GRCm39) |
D676G |
possibly damaging |
Het |
| Myo1a |
C |
T |
10: 127,555,148 (GRCm39) |
P838L |
probably benign |
Het |
| Naip5 |
T |
C |
13: 100,356,225 (GRCm39) |
H1130R |
possibly damaging |
Het |
| Ninl |
C |
A |
2: 150,813,044 (GRCm39) |
G204V |
probably benign |
Het |
| Or12k5 |
C |
A |
2: 36,895,131 (GRCm39) |
R165L |
possibly damaging |
Het |
| Or2a54 |
T |
C |
6: 43,092,880 (GRCm39) |
V68A |
probably benign |
Het |
| Or4k51 |
T |
C |
2: 111,585,347 (GRCm39) |
F251S |
probably damaging |
Het |
| Or5an11 |
T |
A |
19: 12,245,750 (GRCm39) |
L52* |
probably null |
Het |
| Or8c15 |
T |
C |
9: 38,120,777 (GRCm39) |
C141R |
probably damaging |
Het |
| Phactr4 |
G |
A |
4: 132,104,559 (GRCm39) |
T256I |
probably benign |
Het |
| Pip4p2 |
A |
T |
4: 14,892,477 (GRCm39) |
I114L |
possibly damaging |
Het |
| Ptpn22 |
G |
T |
3: 103,781,563 (GRCm39) |
W114L |
probably damaging |
Het |
| Rasa1 |
C |
T |
13: 85,400,540 (GRCm39) |
|
probably null |
Het |
| Rbks |
C |
T |
5: 31,817,341 (GRCm39) |
V143I |
probably benign |
Het |
| Rbm19 |
T |
C |
5: 120,269,241 (GRCm39) |
F515L |
probably damaging |
Het |
| Ror1 |
A |
G |
4: 100,298,180 (GRCm39) |
T518A |
probably benign |
Het |
| Rpusd4 |
C |
A |
9: 35,184,065 (GRCm39) |
A240E |
probably damaging |
Het |
| Rufy3 |
T |
C |
5: 88,780,374 (GRCm39) |
L374P |
probably damaging |
Het |
| Sf3a3 |
T |
C |
4: 124,618,935 (GRCm39) |
S299P |
probably damaging |
Het |
| Slc7a12 |
T |
G |
3: 14,562,414 (GRCm39) |
S264A |
possibly damaging |
Het |
| Tasor |
T |
A |
14: 27,186,217 (GRCm39) |
C805* |
probably null |
Het |
| Tm9sf1 |
T |
C |
14: 55,873,782 (GRCm39) |
Y572C |
probably damaging |
Het |
| Tpcn2 |
G |
A |
7: 144,813,871 (GRCm39) |
S475L |
probably benign |
Het |
| Trim17 |
A |
G |
11: 58,856,018 (GRCm39) |
D25G |
probably damaging |
Het |
| Ttn |
T |
A |
2: 76,572,121 (GRCm39) |
K26257N |
probably damaging |
Het |
| Txndc11 |
C |
A |
16: 10,952,414 (GRCm39) |
|
probably benign |
Het |
| Utrn |
A |
G |
10: 12,559,039 (GRCm39) |
S1405P |
probably damaging |
Het |
| Vmn2r58 |
G |
A |
7: 41,486,864 (GRCm39) |
T677I |
probably damaging |
Het |
|
| Other mutations in Or5ac20 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02271:Or5ac20
|
APN |
16 |
59,104,584 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL02439:Or5ac20
|
APN |
16 |
59,104,818 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02798:Or5ac20
|
APN |
16 |
59,104,478 (GRCm39) |
nonsense |
probably null |
|
|
IGL03075:Or5ac20
|
APN |
16 |
59,104,291 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
IGL03186:Or5ac20
|
APN |
16 |
59,104,266 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R0270:Or5ac20
|
UTSW |
16 |
59,104,116 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0631:Or5ac20
|
UTSW |
16 |
59,104,570 (GRCm39) |
missense |
possibly damaging |
0.60 |
|
R1546:Or5ac20
|
UTSW |
16 |
59,104,366 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3403:Or5ac20
|
UTSW |
16 |
59,104,475 (GRCm39) |
missense |
probably benign |
0.09 |
|
R4790:Or5ac20
|
UTSW |
16 |
59,104,821 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R4960:Or5ac20
|
UTSW |
16 |
59,104,348 (GRCm39) |
missense |
probably benign |
0.23 |
|
R5369:Or5ac20
|
UTSW |
16 |
59,104,743 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R5419:Or5ac20
|
UTSW |
16 |
59,104,704 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5646:Or5ac20
|
UTSW |
16 |
59,104,342 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6048:Or5ac20
|
UTSW |
16 |
59,104,342 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6732:Or5ac20
|
UTSW |
16 |
59,104,314 (GRCm39) |
missense |
probably benign |
0.16 |
|
R6994:Or5ac20
|
UTSW |
16 |
59,104,453 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
R7265:Or5ac20
|
UTSW |
16 |
59,104,287 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7956:Or5ac20
|
UTSW |
16 |
59,104,856 (GRCm39) |
start codon destroyed |
probably null |
0.20 |
|
R8074:Or5ac20
|
UTSW |
16 |
59,104,549 (GRCm39) |
missense |
probably benign |
0.22 |
|
R8082:Or5ac20
|
UTSW |
16 |
59,104,750 (GRCm39) |
missense |
possibly damaging |
0.64 |
|
R8769:Or5ac20
|
UTSW |
16 |
59,104,194 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8896:Or5ac20
|
UTSW |
16 |
59,104,452 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8923:Or5ac20
|
UTSW |
16 |
59,104,399 (GRCm39) |
missense |
probably benign |
0.19 |
|
Z1177:Or5ac20
|
UTSW |
16 |
59,104,293 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1177:Or5ac20
|
UTSW |
16 |
59,104,071 (GRCm39) |
missense |
possibly damaging |
0.56 |
|
| Predicted Primers |
PCR Primer
(F):5'- CTGGCTCAGACCCAGGAAGGATATAG -3'
(R):5'- ATCCGGTGGTGATGTCCAACAAG -3'
Sequencing Primer
(F):5'- TCAGACCCAGGAAGGATATAGATGAG -3'
(R):5'- GTGATGTCCAACAAGCTCTG -3'
|
| Posted On |
2014-03-14 |
Incidental Mutation