Mutagenetix > Incidental Mutations

Incidental Mutation 'R1479:Alox12e'

164214

Institutional Source

Beutler Lab

Gene Symbol

Alox12e

Ensembl Gene

ENSMUSG00000018907

Gene Name

arachidonate lipoxygenase, epidermal

Synonyms

8-LOX, Alox12-ps1, Alox12-ps2, Aloxe, e-LOX1

MMRRC Submission

039532-MU

Accession Numbers

Is this an essential gene?

Probably non essential (E-score: 0.153) question?

Stock #

R1479 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

70315610-70322628 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 70320782 bp

Zygosity

Heterozygous

Amino Acid Change

Valine to Alanine at position 252 (V252A)

Ref Sequence

ENSEMBL: ENSMUSP00000019051 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000019051]

Predicted Effect

probably benign
Transcript: ENSMUST00000019051
AA Change: V252A

PolyPhen 2 Score 0.044 (Sensitivity: 0.94; Specificity: 0.83)

SMART Domains

Protein: ENSMUSP00000019051
Gene: ENSMUSG00000018907
AA Change: V252A

Domain	Start	End	E-Value	Type
LH2	2	111	9.49e-38	SMART
Pfam:Lipoxygenase	163	649	1.2e-60	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000123752

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000139899

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000149060

Meta Mutation Damage Score

0.0652

Coding Region Coverage

1x: 99.2%
3x: 98.5%
10x: 96.8%
20x: 94.3%

Validation Efficiency

96% (81/84)

Allele List at MGI

Other mutations in this stock

Total: 74 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1110008L16Rik	T	A	12: 55,379,387	D138E	probably damaging	Het
1700022I11Rik	A	C	4: 42,972,543	K625N	possibly damaging	Het
2310030G06Rik	T	A	9: 50,741,301	T58S	possibly damaging	Het
4930432K21Rik	C	A	8: 84,162,397	T123K	possibly damaging	Het
Anks6	T	C	4: 47,044,874	D344G	probably damaging	Het
Atg14	A	T	14: 47,547,239		probably null	Het
BC052040	T	A	2: 115,639,013	N74K	probably benign	Het
Bcr	G	T	10: 75,061,125	E34*	probably null	Het
Birc6	C	T	17: 74,634,853	T2728M	probably damaging	Het
Bmp2k	T	A	5: 97,053,200	N326K	probably benign	Het
Ccdc188	A	C	16: 18,219,290	T242P	possibly damaging	Het
Chsy3	A	T	18: 59,408,913	E374D	probably benign	Het
Clca4b	A	T	3: 144,915,468	V615E	probably damaging	Het
Clcnka	C	A	4: 141,389,447	A498S	possibly damaging	Het
Csmd3	A	G	15: 47,857,886	C1450R	probably damaging	Het
Cul7	C	A	17: 46,651,747	D101E	probably damaging	Het
Cyp27b1	G	A	10: 127,051,711		probably null	Het
Cyp2d22	A	G	15: 82,371,936	S404P	probably damaging	Het
Dclk3	G	A	9: 111,468,546	S386N	probably benign	Het
Dnah10	G	A	5: 124,777,889	D1953N	possibly damaging	Het
Dst	T	A	1: 34,264,515		probably null	Het
Egfem1	A	G	3: 29,657,165	N241D	probably damaging	Het
Entpd7	T	C	19: 43,721,840	F312S	probably damaging	Het
Esp34	T	A	17: 38,554,328		probably benign	Het
Fam126b	T	A	1: 58,552,268	R91*	probably null	Het
Foxd2	T	A	4: 114,907,918	T302S	unknown	Het
Fzd6	A	T	15: 39,030,999	N187Y	probably damaging	Het
Gbp9	C	T	5: 105,094,064		probably benign	Het
Gm11492	G	T	11: 87,567,418	R206L	probably damaging	Het
Gna14	T	C	19: 16,533,769	S61P	possibly damaging	Het
Grap	A	T	11: 61,660,298	Y52F	probably benign	Het
H2-T3	T	C	17: 36,189,428	Y125C	probably damaging	Het
Hax1	C	A	3: 89,995,857	E212D	probably damaging	Het
Hecw1	A	C	13: 14,316,492	S638R	probably benign	Het
Hira	A	T	16: 18,896,469	K39M	probably damaging	Het
Hoxa2	T	A	6: 52,163,340	D222V	probably damaging	Het
Jph2	C	T	2: 163,339,271	V658M	possibly damaging	Het
Kansl1	A	T	11: 104,342,416	S762T	probably damaging	Het
Kat6b	T	A	14: 21,618,956	C267S	probably benign	Het
Klk6	A	G	7: 43,831,634	N250S	probably benign	Het
Lbp	T	C	2: 158,319,714	L232S	probably damaging	Het
Lcn9	A	T	2: 25,823,703		probably benign	Het
Lcp2	A	G	11: 34,075,068	H213R	probably benign	Het
Lrrc9	A	T	12: 72,460,825	K367*	probably null	Het
Lyst	A	G	13: 13,634,482	I246V	probably benign	Het
Megf6	G	T	4: 154,177,121	V68L	probably benign	Het
Mst1r	T	C	9: 107,913,345		probably benign	Het
Myo18a	A	G	11: 77,842,194	E909G	probably benign	Het
Nipbl	A	T	15: 8,350,289	D1006E	probably benign	Het
Olfr1164	A	G	2: 88,093,286	F217L	probably benign	Het
Olfr729	C	A	14: 50,148,788	V29F	probably benign	Het
Olfr933	A	T	9: 38,975,762	I29F	probably benign	Het
Otog	A	G	7: 46,295,978	I2220V	possibly damaging	Het
Pcx	T	A	19: 4,602,024	I99N	probably damaging	Het
Pi4ka	C	T	16: 17,373,400	G211D	probably benign	Het
Pp2d1	T	C	17: 53,507,855	S614G	probably benign	Het
Prdx6	G	A	1: 161,244,263	A111V	probably damaging	Het
Prss51	G	A	14: 64,096,170		probably null	Het
Psmd6	C	T	14: 14,116,819		probably benign	Het
Pten	T	A	19: 32,819,850	L345Q	probably damaging	Het
Qrich2	T	G	11: 116,441,485	H2295P	probably benign	Het
Rgs11	T	C	17: 26,208,283		probably null	Het
Rgs6	A	G	12: 83,116,244	E408G	probably damaging	Het
Slc38a7	T	C	8: 95,848,494	T53A	probably benign	Het
Sptbn1	A	G	11: 30,113,909	C1957R	probably damaging	Het
Sumf1	T	C	6: 108,176,058	Y123C	probably damaging	Het
Tnrc6b	T	A	15: 80,887,032		probably null	Het
Ttc21a	C	A	9: 119,956,947	D670E	probably benign	Het
Ttn	A	G	2: 76,744,511	V25346A	probably damaging	Het
Ubr4	A	G	4: 139,425,840	T2070A	possibly damaging	Het
Vmn2r57	C	A	7: 41,427,830	W304L	possibly damaging	Het
Vps13a	T	C	19: 16,750,114		probably benign	Het
Wisp3	G	A	10: 39,153,243	R230W	probably damaging	Het
Zfp647	A	G	15: 76,911,203	V419A	possibly damaging	Het

Other mutations in Alox12e

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00837:Alox12e	APN	11	70321054	missense	probably benign
IGL01781:Alox12e	APN	11	70321456	missense	probably damaging	1.00
R0284:Alox12e	UTSW	11	70320899	splice site	probably benign
R0417:Alox12e	UTSW	11	70321865	missense	probably benign	0.12
R0557:Alox12e	UTSW	11	70321448	missense	possibly damaging	0.80
R0593:Alox12e	UTSW	11	70320897	splice site	probably benign
R1967:Alox12e	UTSW	11	70317856	missense	probably benign	0.18
R1996:Alox12e	UTSW	11	70316208	missense	probably benign	0.00
R2062:Alox12e	UTSW	11	70316002	missense	probably damaging	1.00
R2063:Alox12e	UTSW	11	70316002	missense	probably damaging	1.00
R2067:Alox12e	UTSW	11	70316002	missense	probably damaging	1.00
R2068:Alox12e	UTSW	11	70316002	missense	probably damaging	1.00
R2147:Alox12e	UTSW	11	70319945	missense	probably damaging	1.00
R2307:Alox12e	UTSW	11	70321261	missense	probably damaging	1.00
R3034:Alox12e	UTSW	11	70316253	missense	probably benign	0.01
R3739:Alox12e	UTSW	11	70319842	missense	probably damaging	1.00
R4463:Alox12e	UTSW	11	70318256	missense	probably damaging	1.00
R4572:Alox12e	UTSW	11	70321181	intron	probably benign
R5004:Alox12e	UTSW	11	70321504	missense	probably benign	0.00
R5113:Alox12e	UTSW	11	70315995	missense	possibly damaging	0.70
R5155:Alox12e	UTSW	11	70316255	missense	possibly damaging	0.61
R5464:Alox12e	UTSW	11	70317679	missense	probably damaging	0.99
R5471:Alox12e	UTSW	11	70320024	missense	probably benign	0.17
R5501:Alox12e	UTSW	11	70316229	missense	probably benign	0.01
R5915:Alox12e	UTSW	11	70318224	missense	possibly damaging	0.81
R6033:Alox12e	UTSW	11	70316013	missense	probably benign	0.03
R6033:Alox12e	UTSW	11	70316013	missense	probably benign	0.03
R6102:Alox12e	UTSW	11	70320023	missense	possibly damaging	0.65
R6380:Alox12e	UTSW	11	70321101	missense	probably benign	0.00
R6452:Alox12e	UTSW	11	70320005	missense	probably damaging	0.96

Predicted Primers

PCR Primer
(F):5'- ACTGATCTCCCCAGAACTGATGCC -3'
(R):5'- GAATTCCAACCCAGCTATCCGAGAG -3'

Sequencing Primer
(F):5'- ctccacccccctcacac -3'
(R):5'- CCAGCTATCCGAGAGAACTG -3'

Posted On

2014-03-28