Mutagenetix > Incidental Mutation

Incidental Mutation 'R1482:Oxnad1'

164477

Institutional Source

Beutler Lab

Gene Symbol

Oxnad1

Ensembl Gene

ENSMUSG00000021906

Gene Name

oxidoreductase NAD-binding domain containing 1

Synonyms

2410002F01Rik

MMRRC Submission

039535-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.064) question?

Stock #

R1482 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

31807331-31825159 bp(+) (GRCm39)

Type of Mutation

critical splice donor site (2 bp from exon)

DNA Base Change (assembly)

T to C at 31821590 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000022462 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000022462] [ENSMUST00000022462] [ENSMUST00000164868] [ENSMUST00000164868] [ENSMUST00000165523] [ENSMUST00000165523] [ENSMUST00000168986] [ENSMUST00000169649] [ENSMUST00000170600] [ENSMUST00000171598] [ENSMUST00000227845]

AlphaFold

Q8VE38

Predicted Effect

probably null
Transcript: ENSMUST00000022462

SMART Domains

Protein: ENSMUSP00000022462
Gene: ENSMUSG00000021906

Domain	Start	End	E-Value	Type
Pfam:NAD_binding_6	168	269	6.5e-9	PFAM
Pfam:NAD_binding_1	173	293	8.1e-16	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000022462

SMART Domains

Protein: ENSMUSP00000022462
Gene: ENSMUSG00000021906

Domain	Start	End	E-Value	Type
Pfam:NAD_binding_6	168	269	6.5e-9	PFAM
Pfam:NAD_binding_1	173	293	8.1e-16	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000164396

Predicted Effect

probably benign
Transcript: ENSMUST00000164868

SMART Domains

Protein: ENSMUSP00000125791
Gene: ENSMUSG00000021906

Domain	Start	End	E-Value	Type
SCOP:d1ep3b1	65	149	1e-11	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000164868

SMART Domains

Protein: ENSMUSP00000125791
Gene: ENSMUSG00000021906

Domain	Start	End	E-Value	Type
SCOP:d1ep3b1	65	149	1e-11	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000165523

Predicted Effect

probably benign
Transcript: ENSMUST00000165523

Predicted Effect

probably benign
Transcript: ENSMUST00000168986

SMART Domains

Protein: ENSMUSP00000126372
Gene: ENSMUSG00000021906

Domain	Start	End	E-Value	Type
SCOP:d1ep3b1	65	130	3e-10	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000169078

Predicted Effect

probably benign
Transcript: ENSMUST00000169649

Predicted Effect

probably benign
Transcript: ENSMUST00000170519

SMART Domains

Protein: ENSMUSP00000132560
Gene: ENSMUSG00000021906

Domain	Start	End	E-Value	Type
SCOP:d1ep3b1	2	78	8e-9	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000170519

SMART Domains

Protein: ENSMUSP00000132560
Gene: ENSMUSG00000021906

Domain	Start	End	E-Value	Type
SCOP:d1ep3b1	2	78	8e-9	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000170600

SMART Domains

Protein: ENSMUSP00000130998
Gene: ENSMUSG00000021906

Domain	Start	End	E-Value	Type
SCOP:d1ep3b1	65	143	3e-10	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000171598

SMART Domains

Protein: ENSMUSP00000132162
Gene: ENSMUSG00000021906

Domain	Start	End	E-Value	Type
SCOP:d1ep3b1	65	115	4e-8	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000171849

Predicted Effect

probably benign
Transcript: ENSMUST00000227845

Coding Region Coverage

1x: 98.8%
3x: 97.7%
10x: 93.8%
20x: 83.6%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 61 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1810055G02Rik	G	A	19: 3,767,192 (GRCm39)	D260N	probably benign	Het
Ankef1	A	T	2: 136,392,078 (GRCm39)	K422N	possibly damaging	Het
Anxa2	TCCC	TCC	9: 69,397,036 (GRCm39)		probably null	Het
Aqp6	A	T	15: 99,502,188 (GRCm39)	*294C	probably null	Het
Baz2a	T	A	10: 127,944,877 (GRCm39)	M38K	possibly damaging	Het
Bcl2l14	A	G	6: 134,404,265 (GRCm39)	D151G	probably damaging	Het
Cabp5	T	A	7: 13,132,267 (GRCm39)	L12*	probably null	Het
Cachd1	T	C	4: 100,845,795 (GRCm39)	V993A	possibly damaging	Het
Cd44	G	A	2: 102,661,728 (GRCm39)	T306I	probably damaging	Het
Cdc20	A	T	4: 118,294,253 (GRCm39)	N22K	probably benign	Het
Cdc6	T	A	11: 98,807,807 (GRCm39)	D433E	possibly damaging	Het
Clhc1	A	G	11: 29,503,725 (GRCm39)	D47G	probably damaging	Het
Csf2	T	C	11: 54,139,389 (GRCm39)	K65E	probably benign	Het
Cul9	T	C	17: 46,819,473 (GRCm39)	E2005G	probably damaging	Het
Dclk3	G	T	9: 111,296,888 (GRCm39)	R144L	possibly damaging	Het
Dcpp2	C	T	17: 24,119,516 (GRCm39)	T110I	probably damaging	Het
Disp1	A	T	1: 182,868,038 (GRCm39)	F1461I	possibly damaging	Het
Dnah1	C	T	14: 31,016,831 (GRCm39)	G1562D	probably damaging	Het
Ecpas	T	C	4: 58,820,163 (GRCm39)	K1217E	possibly damaging	Het
Exoc3l2	C	A	7: 19,229,284 (GRCm39)	P234Q	probably damaging	Het
F2rl2	T	C	13: 95,838,047 (GRCm39)	V364A	probably benign	Het
Fam151a	T	C	4: 106,602,876 (GRCm39)	L265P	probably damaging	Het
Fam151b	T	A	13: 92,586,674 (GRCm39)	Q253L	probably benign	Het
Fat1	G	A	8: 45,406,281 (GRCm39)	V1011M	probably benign	Het
Fbxo6	G	A	4: 148,230,441 (GRCm39)	R274*	probably null	Het
Fgd4	G	T	16: 16,302,337 (GRCm39)	Q73K	probably benign	Het
Fth1	A	G	19: 9,962,217 (GRCm39)	T154A	probably benign	Het
Hgs	C	A	11: 120,370,866 (GRCm39)	H572Q	probably benign	Het
Kcnk10	G	A	12: 98,456,207 (GRCm39)	T208I	probably damaging	Het
Kdm5b	G	A	1: 134,552,635 (GRCm39)	V1204M	probably damaging	Het
Keg1	A	C	19: 12,696,185 (GRCm39)	H166P	probably damaging	Het
Kifap3	A	T	1: 163,653,428 (GRCm39)	N338I	possibly damaging	Het
Llcfc1	A	T	6: 41,662,218 (GRCm39)	D74V	probably damaging	Het
Lman2	A	G	13: 55,499,218 (GRCm39)	V219A	possibly damaging	Het
Mettl25	A	G	10: 105,662,451 (GRCm39)	I173T	possibly damaging	Het
Mov10	G	T	3: 104,711,862 (GRCm39)	P170Q	probably damaging	Het
Mtif2	G	T	11: 29,486,847 (GRCm39)	A286S	probably damaging	Het
Mtmr10	A	G	7: 63,963,997 (GRCm39)	Y244C	probably damaging	Het
Nbea	A	T	3: 55,987,414 (GRCm39)	C359S	probably damaging	Het
Nbr1	C	T	11: 101,463,667 (GRCm39)	T633I	probably benign	Het
Nepn	A	T	10: 52,276,512 (GRCm39)	T22S	probably damaging	Het
Nup214	C	T	2: 31,924,478 (GRCm39)	S1669F	probably damaging	Het
Oacyl	T	A	18: 65,871,043 (GRCm39)	L342M	probably damaging	Het
Or2ag17	A	G	7: 106,389,540 (GRCm39)	F223L	probably benign	Het
Or52b2	T	A	7: 104,986,463 (GRCm39)	R153S	probably damaging	Het
Or6c205	T	A	10: 129,087,012 (GRCm39)	I203N	possibly damaging	Het
Or7e176	G	A	9: 20,172,020 (GRCm39)	V295I	possibly damaging	Het
Pard3b	A	T	1: 62,205,526 (GRCm39)	D440V	probably damaging	Het
Pou3f2	T	G	4: 22,486,960 (GRCm39)	D391A	possibly damaging	Het
Ptprk	T	C	10: 28,139,512 (GRCm39)	V79A	probably benign	Het
Rwdd2a	A	G	9: 86,456,331 (GRCm39)	D169G	probably damaging	Het
Scn3b	A	C	9: 40,190,792 (GRCm39)	D74A	probably damaging	Het
Setbp1	C	T	18: 79,130,050 (GRCm39)	D61N	probably damaging	Het
Setx	T	A	2: 29,053,004 (GRCm39)	D2089E	probably damaging	Het
Vmn2r69	C	G	7: 85,056,082 (GRCm39)	W685C	probably damaging	Het
Vps8	A	G	16: 21,400,348 (GRCm39)	Q1272R	probably benign	Het
Wnk4	T	C	11: 101,160,462 (GRCm39)	F699L	probably damaging	Het
Zfp616	T	A	11: 73,974,803 (GRCm39)	N448K	possibly damaging	Het
Zfp618	C	A	4: 63,033,685 (GRCm39)	D307E	possibly damaging	Het
Zfp687	A	G	3: 94,914,844 (GRCm39)	F1219S	probably damaging	Het
Zfpm2	T	A	15: 40,962,687 (GRCm39)	D248E	probably damaging	Het

Other mutations in Oxnad1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
R0480:Oxnad1	UTSW	14	31,821,437 (GRCm39)	missense	probably damaging	1.00
R0879:Oxnad1	UTSW	14	31,821,553 (GRCm39)	missense	probably damaging	1.00
R1526:Oxnad1	UTSW	14	31,824,244 (GRCm39)	missense	probably benign	0.00
R4649:Oxnad1	UTSW	14	31,824,366 (GRCm39)	makesense	probably null
R4703:Oxnad1	UTSW	14	31,817,427 (GRCm39)	missense	probably damaging	1.00
R6411:Oxnad1	UTSW	14	31,813,609 (GRCm39)	missense	possibly damaging	0.92
R6980:Oxnad1	UTSW	14	31,807,576 (GRCm39)	unclassified	probably benign
R7117:Oxnad1	UTSW	14	31,813,608 (GRCm39)	missense	probably benign	0.00
R7167:Oxnad1	UTSW	14	31,822,976 (GRCm39)	nonsense	probably null
R7197:Oxnad1	UTSW	14	31,818,473 (GRCm39)	missense	possibly damaging	0.50
R7707:Oxnad1	UTSW	14	31,823,965 (GRCm39)	splice site	probably null
R7809:Oxnad1	UTSW	14	31,822,962 (GRCm39)	missense	probably benign
R8139:Oxnad1	UTSW	14	31,814,048 (GRCm39)	missense	possibly damaging	0.68
R8421:Oxnad1	UTSW	14	31,821,431 (GRCm39)	missense	probably benign	0.05
R8475:Oxnad1	UTSW	14	31,823,250 (GRCm39)	splice site	probably null
X0020:Oxnad1	UTSW	14	31,813,718 (GRCm39)	critical splice donor site	probably null

Predicted Primers

PCR Primer
(F):5'- TCTTTGACCCTCAGCCCACAGATG -3'
(R):5'- ATCAGGCACTTCGGCCATACTCAC -3'

Sequencing Primer
(F):5'- GATGCCCCTCGAAACCTC -3'
(R):5'- CCTTATGGCATTCTCATATGCAC -3'

Posted On

2014-03-28