Incidental Mutation 'R1478:Srrm2'
ID 165663
Institutional Source Beutler Lab
Gene Symbol Srrm2
Ensembl Gene ENSMUSG00000039218
Gene Name serine/arginine repetitive matrix 2
Synonyms 5033413A03Rik, SRm300
MMRRC Submission 039531-MU
Accession Numbers
Essential gene? Probably essential (E-score: 0.949) question?
Stock # R1478 (G1)
Quality Score 225
Status Not validated
Chromosome 17
Chromosomal Location 24009506-24043715 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 24034876 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Serine to Proline at position 507 (S507P)
Ref Sequence ENSEMBL: ENSMUSP00000085993 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000088621] [ENSMUST00000190686]
AlphaFold no structure available at present
Predicted Effect probably benign
Transcript: ENSMUST00000088621
AA Change: S507P

PolyPhen 2 Score 0.226 (Sensitivity: 0.91; Specificity: 0.88)
SMART Domains Protein: ENSMUSP00000085993
Gene: ENSMUSG00000039218
AA Change: S507P

DomainStartEndE-ValueType
low complexity region 82 157 N/A INTRINSIC
low complexity region 161 188 N/A INTRINSIC
low complexity region 223 238 N/A INTRINSIC
internal_repeat_4 248 305 2.93e-5 PROSPERO
internal_repeat_5 259 388 2.93e-5 PROSPERO
low complexity region 407 423 N/A INTRINSIC
CTD 464 584 5.25e-14 SMART
low complexity region 652 682 N/A INTRINSIC
low complexity region 689 721 N/A INTRINSIC
internal_repeat_6 732 778 4.88e-5 PROSPERO
low complexity region 779 795 N/A INTRINSIC
low complexity region 802 824 N/A INTRINSIC
low complexity region 839 853 N/A INTRINSIC
internal_repeat_2 859 1124 6.34e-6 PROSPERO
internal_repeat_1 1055 1183 3.81e-6 PROSPERO
internal_repeat_4 1113 1166 2.93e-5 PROSPERO
internal_repeat_6 1169 1213 4.88e-5 PROSPERO
low complexity region 1236 1244 N/A INTRINSIC
low complexity region 1275 1286 N/A INTRINSIC
low complexity region 1290 1312 N/A INTRINSIC
internal_repeat_2 1313 1485 6.34e-6 PROSPERO
low complexity region 1493 1525 N/A INTRINSIC
low complexity region 1545 1555 N/A INTRINSIC
low complexity region 1559 1720 N/A INTRINSIC
low complexity region 1734 1919 N/A INTRINSIC
low complexity region 1926 1951 N/A INTRINSIC
low complexity region 1966 1980 N/A INTRINSIC
low complexity region 2079 2105 N/A INTRINSIC
internal_repeat_3 2107 2118 1.06e-5 PROSPERO
internal_repeat_3 2135 2146 1.06e-5 PROSPERO
low complexity region 2153 2172 N/A INTRINSIC
internal_repeat_5 2182 2320 2.93e-5 PROSPERO
internal_repeat_1 2224 2368 3.81e-6 PROSPERO
low complexity region 2390 2425 N/A INTRINSIC
low complexity region 2518 2539 N/A INTRINSIC
low complexity region 2541 2550 N/A INTRINSIC
low complexity region 2552 2571 N/A INTRINSIC
low complexity region 2594 2607 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000186045
Predicted Effect noncoding transcript
Transcript: ENSMUST00000186914
Predicted Effect noncoding transcript
Transcript: ENSMUST00000189977
Predicted Effect unknown
Transcript: ENSMUST00000190686
AA Change: S603P
SMART Domains Protein: ENSMUSP00000139842
Gene: ENSMUSG00000039218
AA Change: S603P

DomainStartEndE-ValueType
Pfam:cwf21 58 102 1.5e-13 PFAM
low complexity region 178 253 N/A INTRINSIC
low complexity region 257 284 N/A INTRINSIC
low complexity region 319 334 N/A INTRINSIC
internal_repeat_4 344 401 3.07e-5 PROSPERO
internal_repeat_5 355 484 3.07e-5 PROSPERO
low complexity region 503 519 N/A INTRINSIC
CTD 560 680 5.25e-14 SMART
low complexity region 748 778 N/A INTRINSIC
low complexity region 785 817 N/A INTRINSIC
internal_repeat_6 828 874 5.11e-5 PROSPERO
low complexity region 875 891 N/A INTRINSIC
low complexity region 898 920 N/A INTRINSIC
low complexity region 935 949 N/A INTRINSIC
internal_repeat_2 955 1220 6.62e-6 PROSPERO
internal_repeat_1 1151 1279 3.97e-6 PROSPERO
internal_repeat_4 1209 1262 3.07e-5 PROSPERO
internal_repeat_6 1265 1309 5.11e-5 PROSPERO
low complexity region 1332 1340 N/A INTRINSIC
low complexity region 1371 1382 N/A INTRINSIC
low complexity region 1386 1408 N/A INTRINSIC
internal_repeat_2 1409 1581 6.62e-6 PROSPERO
low complexity region 1589 1621 N/A INTRINSIC
low complexity region 1641 1651 N/A INTRINSIC
low complexity region 1655 1816 N/A INTRINSIC
low complexity region 1830 2015 N/A INTRINSIC
low complexity region 2022 2047 N/A INTRINSIC
low complexity region 2062 2076 N/A INTRINSIC
low complexity region 2175 2201 N/A INTRINSIC
internal_repeat_3 2203 2214 1.1e-5 PROSPERO
internal_repeat_3 2231 2242 1.1e-5 PROSPERO
low complexity region 2249 2268 N/A INTRINSIC
internal_repeat_5 2278 2416 3.07e-5 PROSPERO
internal_repeat_1 2320 2464 3.97e-6 PROSPERO
low complexity region 2486 2521 N/A INTRINSIC
low complexity region 2614 2635 N/A INTRINSIC
low complexity region 2637 2646 N/A INTRINSIC
low complexity region 2648 2667 N/A INTRINSIC
low complexity region 2690 2703 N/A INTRINSIC
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.2%
  • 10x: 95.7%
  • 20x: 90.6%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 63 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aacs T A 5: 125,580,287 (GRCm39) I204N possibly damaging Het
Acaca A G 11: 84,263,453 (GRCm39) T2025A probably damaging Het
B4galt3 C T 1: 171,103,938 (GRCm39) R170C probably benign Het
BC028528 T C 3: 95,799,271 (GRCm39) probably null Het
Ccdc73 A T 2: 104,737,955 (GRCm39) Q17L possibly damaging Het
Ccdc73 A G 2: 104,745,012 (GRCm39) T50A possibly damaging Het
Ccdc83 T C 7: 89,908,677 (GRCm39) D19G probably damaging Het
Ccn6 G A 10: 39,029,239 (GRCm39) R230W probably damaging Het
Cct8l1 T C 5: 25,722,767 (GRCm39) V494A probably benign Het
Chd1 T C 17: 15,959,769 (GRCm39) F663L probably damaging Het
Chn2 A T 6: 54,270,065 (GRCm39) E319V probably damaging Het
Cnnm1 T C 19: 43,460,295 (GRCm39) V679A probably damaging Het
Cntn6 C T 6: 104,753,389 (GRCm39) T447I probably benign Het
Cyp3a11 G T 5: 145,795,581 (GRCm39) L457I probably benign Het
Dera T A 6: 137,807,193 (GRCm39) S214T possibly damaging Het
Dmtf1 A G 5: 9,171,404 (GRCm39) V501A possibly damaging Het
Dnpep A G 1: 75,292,671 (GRCm39) V114A probably damaging Het
Dscam C T 16: 96,592,110 (GRCm39) V722M probably benign Het
Dsp A G 13: 38,365,114 (GRCm39) N499S probably damaging Het
Ecd A T 14: 20,396,725 (GRCm39) Y53* probably null Het
Esyt3 T C 9: 99,200,119 (GRCm39) T692A probably benign Het
Fat1 T A 8: 45,478,659 (GRCm39) N2545K probably damaging Het
Fndc3a A G 14: 72,795,072 (GRCm39) probably null Het
Fscn3 A G 6: 28,430,567 (GRCm39) M246V probably benign Het
Gde1 G T 7: 118,291,007 (GRCm39) T106K probably benign Het
Gjc2 A G 11: 59,068,434 (GRCm39) I16T possibly damaging Het
Hacd4 A T 4: 88,341,260 (GRCm39) M168K probably damaging Het
Hmx3 A G 7: 131,145,826 (GRCm39) E178G probably damaging Het
Htt A G 5: 34,961,171 (GRCm39) Y266C probably damaging Het
Jkampl A T 6: 73,446,039 (GRCm39) L170Q probably damaging Het
Kif27 G T 13: 58,451,359 (GRCm39) R990S probably damaging Het
Krtap22-2 A T 16: 88,807,534 (GRCm39) Y21* probably null Het
Lrrc41 T A 4: 115,952,405 (GRCm39) L661* probably null Het
Lrrc63 T C 14: 75,363,424 (GRCm39) T236A probably benign Het
Mmp13 T C 9: 7,272,892 (GRCm39) L84P probably damaging Het
Myh8 T C 11: 67,183,551 (GRCm39) I754T probably benign Het
Neb A C 2: 52,065,619 (GRCm39) D5961E probably benign Het
Nlrx1 T C 9: 44,175,374 (GRCm39) H134R probably benign Het
Npepps A T 11: 97,117,673 (GRCm39) M542K probably benign Het
Nup160 C T 2: 90,509,743 (GRCm39) probably benign Het
Or3a1c T A 11: 74,045,963 (GRCm39) probably null Het
Or8g33 T A 9: 39,337,888 (GRCm39) T160S possibly damaging Het
Pikfyve T C 1: 65,302,136 (GRCm39) probably null Het
Ppp6r1 A T 7: 4,643,377 (GRCm39) probably null Het
Prss33 A G 17: 24,054,072 (GRCm39) W45R probably damaging Het
Ptprf A T 4: 118,069,302 (GRCm39) Y980* probably null Het
Qrich1 T C 9: 108,436,531 (GRCm39) V743A probably benign Het
Rev3l G A 10: 39,659,329 (GRCm39) probably null Het
Samd9l A T 6: 3,376,369 (GRCm39) N297K probably benign Het
Sap130 A G 18: 31,813,527 (GRCm39) H528R possibly damaging Het
Slc9b2 T C 3: 135,031,863 (GRCm39) V241A probably benign Het
Snx14 A T 9: 88,276,581 (GRCm39) V577E probably benign Het
Stat2 A G 10: 128,117,969 (GRCm39) probably null Het
Susd5 T C 9: 113,925,752 (GRCm39) F545S probably benign Het
Tafa2 T A 10: 123,429,401 (GRCm39) M5K possibly damaging Het
Tnnt2 A G 1: 135,775,764 (GRCm39) T107A probably benign Het
Trappc6b T A 12: 59,094,953 (GRCm39) I41F possibly damaging Het
Ttn T A 2: 76,682,417 (GRCm39) probably benign Het
Vmn1r88 A C 7: 12,911,878 (GRCm39) D78A probably damaging Het
Xpc C T 6: 91,485,510 (GRCm39) D122N possibly damaging Het
Xpo1 C T 11: 23,241,623 (GRCm39) A890V probably damaging Het
Zfp493 A G 13: 67,934,680 (GRCm39) H211R probably damaging Het
Zfp958 A T 8: 4,679,190 (GRCm39) H405L probably damaging Het
Other mutations in Srrm2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00421:Srrm2 APN 17 24,031,452 (GRCm39) missense probably benign 0.23
IGL00484:Srrm2 APN 17 24,037,492 (GRCm39) missense probably benign 0.23
IGL01413:Srrm2 APN 17 24,034,999 (GRCm39) unclassified probably benign
IGL02272:Srrm2 APN 17 24,034,756 (GRCm39) unclassified probably benign
IGL02279:Srrm2 APN 17 24,034,306 (GRCm39) unclassified probably benign
IGL02325:Srrm2 APN 17 24,029,453 (GRCm39) unclassified probably benign
IGL02947:Srrm2 APN 17 24,029,720 (GRCm39) missense probably benign 0.23
IGL03002:Srrm2 APN 17 24,034,708 (GRCm39) unclassified probably benign
BB009:Srrm2 UTSW 17 24,037,501 (GRCm39) missense probably benign 0.23
BB019:Srrm2 UTSW 17 24,037,501 (GRCm39) missense probably benign 0.23
R0173:Srrm2 UTSW 17 24,034,103 (GRCm39) unclassified probably benign
R1018:Srrm2 UTSW 17 24,041,514 (GRCm39) missense probably damaging 0.98
R1109:Srrm2 UTSW 17 24,038,591 (GRCm39) unclassified probably benign
R1199:Srrm2 UTSW 17 24,036,725 (GRCm39) unclassified probably benign
R1471:Srrm2 UTSW 17 24,039,770 (GRCm39) missense probably damaging 1.00
R1618:Srrm2 UTSW 17 24,037,906 (GRCm39) unclassified probably benign
R1678:Srrm2 UTSW 17 24,037,960 (GRCm39) missense probably benign 0.23
R1853:Srrm2 UTSW 17 24,039,499 (GRCm39) missense probably damaging 1.00
R1968:Srrm2 UTSW 17 24,040,465 (GRCm39) missense probably damaging 1.00
R2094:Srrm2 UTSW 17 24,031,403 (GRCm39) unclassified probably benign
R2102:Srrm2 UTSW 17 24,036,722 (GRCm39) unclassified probably benign
R2156:Srrm2 UTSW 17 24,037,237 (GRCm39) missense probably benign 0.23
R2214:Srrm2 UTSW 17 24,035,719 (GRCm39) unclassified probably benign
R2913:Srrm2 UTSW 17 24,034,658 (GRCm39) unclassified probably benign
R3721:Srrm2 UTSW 17 24,041,549 (GRCm39) small deletion probably benign
R4411:Srrm2 UTSW 17 24,029,442 (GRCm39) unclassified probably benign
R4412:Srrm2 UTSW 17 24,029,442 (GRCm39) unclassified probably benign
R4413:Srrm2 UTSW 17 24,029,442 (GRCm39) unclassified probably benign
R4583:Srrm2 UTSW 17 24,038,593 (GRCm39) unclassified probably benign
R4682:Srrm2 UTSW 17 24,034,666 (GRCm39) missense probably benign 0.23
R4910:Srrm2 UTSW 17 24,034,362 (GRCm39) unclassified probably benign
R4943:Srrm2 UTSW 17 24,041,389 (GRCm39) missense possibly damaging 0.94
R5023:Srrm2 UTSW 17 24,038,291 (GRCm39) unclassified probably benign
R5033:Srrm2 UTSW 17 24,039,592 (GRCm39) missense probably damaging 1.00
R5163:Srrm2 UTSW 17 24,038,524 (GRCm39) unclassified probably benign
R5186:Srrm2 UTSW 17 24,035,561 (GRCm39) missense probably benign 0.23
R5197:Srrm2 UTSW 17 24,036,358 (GRCm39) missense probably benign 0.23
R5366:Srrm2 UTSW 17 24,037,678 (GRCm39) missense probably benign 0.23
R5483:Srrm2 UTSW 17 24,040,246 (GRCm39) missense probably damaging 0.96
R5551:Srrm2 UTSW 17 24,037,450 (GRCm39) unclassified probably benign
R5602:Srrm2 UTSW 17 24,038,311 (GRCm39) unclassified probably benign
R5733:Srrm2 UTSW 17 24,040,360 (GRCm39) missense probably damaging 0.98
R5774:Srrm2 UTSW 17 24,037,249 (GRCm39) unclassified probably benign
R5909:Srrm2 UTSW 17 24,040,291 (GRCm39) missense probably benign 0.27
R5961:Srrm2 UTSW 17 24,039,083 (GRCm39) unclassified probably benign
R6122:Srrm2 UTSW 17 24,039,330 (GRCm39) missense possibly damaging 0.58
R6906:Srrm2 UTSW 17 24,039,337 (GRCm39) missense probably damaging 0.97
R7084:Srrm2 UTSW 17 24,039,290 (GRCm39) missense probably damaging 0.99
R7177:Srrm2 UTSW 17 24,035,747 (GRCm39) missense unknown
R7197:Srrm2 UTSW 17 24,037,198 (GRCm39) missense unknown
R7442:Srrm2 UTSW 17 24,039,091 (GRCm39) missense unknown
R7644:Srrm2 UTSW 17 24,038,294 (GRCm39) missense unknown
R7664:Srrm2 UTSW 17 24,039,955 (GRCm39) missense probably damaging 0.99
R7874:Srrm2 UTSW 17 24,034,652 (GRCm39) missense unknown
R7932:Srrm2 UTSW 17 24,037,501 (GRCm39) missense probably benign 0.23
R7950:Srrm2 UTSW 17 24,027,084 (GRCm39) missense unknown
R7958:Srrm2 UTSW 17 24,040,286 (GRCm39) missense probably benign 0.25
R8081:Srrm2 UTSW 17 24,039,219 (GRCm39) missense probably damaging 1.00
R8118:Srrm2 UTSW 17 24,027,057 (GRCm39) missense unknown
R8174:Srrm2 UTSW 17 24,034,297 (GRCm39) missense unknown
R8191:Srrm2 UTSW 17 24,039,219 (GRCm39) missense probably damaging 1.00
R8334:Srrm2 UTSW 17 24,027,330 (GRCm39) missense unknown
R8523:Srrm2 UTSW 17 24,027,489 (GRCm39) unclassified probably benign
R8728:Srrm2 UTSW 17 24,038,831 (GRCm39) missense unknown
R8912:Srrm2 UTSW 17 24,038,575 (GRCm39) missense probably benign 0.23
R9209:Srrm2 UTSW 17 24,039,880 (GRCm39) missense probably benign 0.05
RF006:Srrm2 UTSW 17 24,031,562 (GRCm39) missense unknown
Z1176:Srrm2 UTSW 17 24,036,157 (GRCm39) missense unknown
Z1177:Srrm2 UTSW 17 24,036,484 (GRCm39) missense unknown
Predicted Primers PCR Primer
(F):5'- TGGTCCAGGAGCAGAAATACCCAG -3'
(R):5'- TACTTCGAGATCGTCGTCGTGCTG -3'

Sequencing Primer
(F):5'- TACCCAGAGAAGAGGCAGGTC -3'
(R):5'- CGTTCTAGACCGAGATCGAG -3'
Posted On 2014-03-28