Incidental Mutation 'R1501:Dcaf17'
ID 169238
Institutional Source Beutler Lab
Gene Symbol Dcaf17
Ensembl Gene ENSMUSG00000041966
Gene Name DDB1 and CUL4 associated factor 17
Synonyms 4833418A01Rik, 2810055O12Rik, A030004A10Rik, A930009G19Rik
MMRRC Submission 040867-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.180) question?
Stock # R1501 (G1)
Quality Score 225
Status Not validated
Chromosome 2
Chromosomal Location 70885672-70929486 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 70912332 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Isoleucine to Phenylalanine at position 320 (I320F)
Gene Model predicted gene model for transcript(s): [ENSMUST00000064141] [ENSMUST00000102701] [ENSMUST00000112159] [ENSMUST00000112167] [ENSMUST00000135357] [ENSMUST00000154704]
AlphaFold Q3TUL7
Predicted Effect possibly damaging
Transcript: ENSMUST00000064141
AA Change: I306F

PolyPhen 2 Score 0.861 (Sensitivity: 0.83; Specificity: 0.93)
Predicted Effect possibly damaging
Transcript: ENSMUST00000102701
AA Change: I306F

PolyPhen 2 Score 0.716 (Sensitivity: 0.86; Specificity: 0.92)
Predicted Effect silent
Transcript: ENSMUST00000112159
Predicted Effect probably benign
Transcript: ENSMUST00000112167
Predicted Effect probably damaging
Transcript: ENSMUST00000130292
AA Change: I320F

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000117830
Gene: ENSMUSG00000041966
AA Change: I320F

DomainStartEndE-ValueType
Pfam:DCAF17 55 405 6.6e-166 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000132619
Predicted Effect probably benign
Transcript: ENSMUST00000135357
SMART Domains Protein: ENSMUSP00000118011
Gene: ENSMUSG00000041966

DomainStartEndE-ValueType
transmembrane domain 98 117 N/A INTRINSIC
transmembrane domain 132 151 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000154704
AA Change: I306F

PolyPhen 2 Score 0.861 (Sensitivity: 0.83; Specificity: 0.93)
Predicted Effect probably benign
Transcript: ENSMUST00000136299
Coding Region Coverage
  • 1x: 99.4%
  • 3x: 98.7%
  • 10x: 97.4%
  • 20x: 95.7%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a nuclear transmembrane protein that associates with cullin 4A/damaged DNA binding protein 1 ubiquitin ligase complex. Mutations in this gene are associated with Woodhouse-Sakati syndrome. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Sep 2009]
Allele List at MGI
Other mutations in this stock
Total: 78 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Akap11 A T 14: 78,750,787 (GRCm39) S533R probably benign Het
Amph C T 13: 19,288,461 (GRCm39) Q317* probably null Het
Bach2 A G 4: 32,562,279 (GRCm39) T249A possibly damaging Het
Cacna2d3 A G 14: 28,703,137 (GRCm39) C845R probably damaging Het
Calml4 A G 9: 62,778,622 (GRCm39) K12E probably benign Het
Chrd C T 16: 20,556,283 (GRCm39) R615W probably damaging Het
Chst15 T A 7: 131,870,798 (GRCm39) K246* probably null Het
Cmtr2 G A 8: 110,948,235 (GRCm39) D182N probably benign Het
Cyp2d9 C A 15: 82,338,525 (GRCm39) C186* probably null Het
Cyp3a13 G T 5: 137,909,892 (GRCm39) probably null Het
Ddx10 T C 9: 53,145,297 (GRCm39) I227V possibly damaging Het
Dlc1 G T 8: 37,405,302 (GRCm39) N162K probably benign Het
Dnhd1 G A 7: 105,317,670 (GRCm39) R455H probably benign Het
Drg2 G T 11: 60,355,679 (GRCm39) A306S probably benign Het
Dsg1a A T 18: 20,465,076 (GRCm39) R422S probably damaging Het
Ehbp1l1 A G 19: 5,766,452 (GRCm39) V353A probably damaging Het
Emilin2 T C 17: 71,617,756 (GRCm39) S34G probably benign Het
Enpp2 C A 15: 54,702,910 (GRCm39) W862L probably damaging Het
Exoc2 T C 13: 31,119,485 (GRCm39) I139V probably benign Het
Fhad1 C T 4: 141,691,936 (GRCm39) R400H probably benign Het
Fv1 C T 4: 147,954,595 (GRCm39) T387M probably damaging Het
Gatad1 T A 5: 3,693,701 (GRCm39) D156V probably damaging Het
Gm4744 A G 6: 40,927,367 (GRCm39) probably benign Het
Gm4799 G A 10: 82,790,469 (GRCm39) noncoding transcript Het
Hadha A G 5: 30,333,804 (GRCm39) F405S probably benign Het
Ifit3 T C 19: 34,565,651 (GRCm39) V399A probably benign Het
Il1rapl1 G T X: 86,348,469 (GRCm39) Y150* probably null Het
Kirrel1 T C 3: 86,997,779 (GRCm39) E248G probably benign Het
Krt72 C A 15: 101,686,769 (GRCm39) K392N probably damaging Het
Loxhd1 G A 18: 77,444,528 (GRCm39) G309D probably damaging Het
Mc3r T G 2: 172,091,300 (GRCm39) I174S probably benign Het
Me3 A G 7: 89,282,273 (GRCm39) D52G probably benign Het
Med12l T C 3: 59,168,256 (GRCm39) probably null Het
Mgat5 G A 1: 127,325,378 (GRCm39) probably null Het
Mphosph10 A T 7: 64,039,252 (GRCm39) F239L probably damaging Het
Mrps7 T C 11: 115,495,023 (GRCm39) S13P probably benign Het
Nexn T C 3: 151,943,323 (GRCm39) T527A possibly damaging Het
Nlrp1b G A 11: 71,046,885 (GRCm39) H1156Y probably damaging Het
Nostrin A G 2: 68,989,129 (GRCm39) E120G probably damaging Het
Nsun2 A G 13: 69,779,706 (GRCm39) E624G probably damaging Het
Oga T C 19: 45,767,079 (GRCm39) D99G probably null Het
Or4c102 G A 2: 88,422,492 (GRCm39) V115I possibly damaging Het
Or4k2 A G 14: 50,424,539 (GRCm39) I45T probably damaging Het
Or52n4b G A 7: 108,143,782 (GRCm39) V15I probably benign Het
Or5p70 A C 7: 107,995,289 (GRCm39) K321Q probably benign Het
Phldb2 T C 16: 45,598,146 (GRCm39) N802S probably damaging Het
Pik3c2g T C 6: 139,789,796 (GRCm39) probably null Het
Pikfyve T A 1: 65,304,443 (GRCm39) I1670N possibly damaging Het
Pld5 A G 1: 175,803,087 (GRCm39) F393L probably benign Het
Plekhg1 C A 10: 3,907,361 (GRCm39) D759E probably benign Het
Plekhm1 A G 11: 103,277,888 (GRCm39) S403P probably benign Het
Pop1 T C 15: 34,510,503 (GRCm39) F432L probably benign Het
Ptpn13 T C 5: 103,664,230 (GRCm39) I406T probably benign Het
Ptpn5 G T 7: 46,739,623 (GRCm39) D185E probably benign Het
Rad50 G T 11: 53,578,978 (GRCm39) Q527K possibly damaging Het
Scn7a A G 2: 66,530,507 (GRCm39) F613L probably benign Het
Sec16a T A 2: 26,330,057 (GRCm39) M653L probably benign Het
Sh3bp2 T C 5: 34,712,920 (GRCm39) probably null Het
Slc22a3 G A 17: 12,725,991 (GRCm39) T74I probably benign Het
Slc23a4 A G 6: 34,932,057 (GRCm39) L272P probably damaging Het
Slc26a8 T C 17: 28,857,536 (GRCm39) D869G possibly damaging Het
Slc5a11 T A 7: 122,859,731 (GRCm39) V291E probably damaging Het
Slc6a19 C A 13: 73,832,167 (GRCm39) A470S probably benign Het
Slfn8 A G 11: 82,894,006 (GRCm39) S878P probably damaging Het
Smchd1 A G 17: 71,672,089 (GRCm39) M1655T possibly damaging Het
Srgap2 A G 1: 131,220,437 (GRCm39) L179P probably damaging Het
Tbx2 A G 11: 85,725,622 (GRCm39) D191G probably damaging Het
Tenm3 A G 8: 48,796,351 (GRCm39) Y485H probably damaging Het
Trim12c T A 7: 103,990,095 (GRCm39) probably benign Het
Trpc6 A G 9: 8,610,170 (GRCm39) T213A probably damaging Het
Upp1 T A 11: 9,084,708 (GRCm39) probably null Het
Vmn1r46 A T 6: 89,953,198 (GRCm39) I16L probably benign Het
Vmn2r75 A T 7: 85,814,850 (GRCm39) D214E possibly damaging Het
Vmn2r95 T A 17: 18,660,118 (GRCm39) Y177N probably damaging Het
Vmn2r99 T G 17: 19,582,521 (GRCm39) I42S possibly damaging Het
Zeb1 A T 18: 5,761,399 (GRCm39) K232N possibly damaging Het
Zfp280b T C 10: 75,875,603 (GRCm39) I494T probably damaging Het
Zfp804a A G 2: 82,066,143 (GRCm39) D38G probably damaging Het
Other mutations in Dcaf17
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00093:Dcaf17 APN 2 70,908,503 (GRCm39) missense probably benign 0.03
IGL01125:Dcaf17 APN 2 70,920,149 (GRCm39) missense probably benign 0.03
IGL01761:Dcaf17 APN 2 70,886,881 (GRCm39) missense probably damaging 1.00
IGL02641:Dcaf17 APN 2 70,912,375 (GRCm39) missense probably damaging 1.00
R0081:Dcaf17 UTSW 2 70,908,812 (GRCm39) splice site probably benign
R0388:Dcaf17 UTSW 2 70,908,915 (GRCm39) missense probably benign 0.02
R0593:Dcaf17 UTSW 2 70,917,744 (GRCm39) critical splice donor site probably null
R0637:Dcaf17 UTSW 2 70,890,763 (GRCm39) missense probably damaging 0.99
R0661:Dcaf17 UTSW 2 70,918,779 (GRCm39) missense probably damaging 1.00
R1281:Dcaf17 UTSW 2 70,908,500 (GRCm39) missense probably damaging 1.00
R1454:Dcaf17 UTSW 2 70,903,517 (GRCm39) missense probably damaging 1.00
R1908:Dcaf17 UTSW 2 70,890,713 (GRCm39) nonsense probably null
R1919:Dcaf17 UTSW 2 70,908,516 (GRCm39) splice site probably null
R2882:Dcaf17 UTSW 2 70,912,371 (GRCm39) missense possibly damaging 0.96
R4585:Dcaf17 UTSW 2 70,918,924 (GRCm39) missense probably benign 0.00
R4586:Dcaf17 UTSW 2 70,918,924 (GRCm39) missense probably benign 0.00
R6093:Dcaf17 UTSW 2 70,912,356 (GRCm39) missense possibly damaging 0.51
R7070:Dcaf17 UTSW 2 70,918,857 (GRCm39) missense probably benign 0.00
R8289:Dcaf17 UTSW 2 70,885,718 (GRCm39) missense
R8418:Dcaf17 UTSW 2 70,918,717 (GRCm39) missense probably damaging 1.00
R8681:Dcaf17 UTSW 2 70,886,913 (GRCm39) nonsense probably null
R8786:Dcaf17 UTSW 2 70,917,744 (GRCm39) critical splice donor site probably null
R8879:Dcaf17 UTSW 2 70,893,746 (GRCm39) missense possibly damaging 0.85
R9072:Dcaf17 UTSW 2 70,920,136 (GRCm39) missense probably benign 0.01
R9312:Dcaf17 UTSW 2 70,908,458 (GRCm39) missense probably benign 0.01
R9460:Dcaf17 UTSW 2 70,917,695 (GRCm39) missense possibly damaging 0.89
Predicted Primers PCR Primer
(F):5'- CCTACTTAATGACGGGTGCAAGTCC -3'
(R):5'- TCCACAGCAATTTCAGAGGCAGC -3'

Sequencing Primer
(F):5'- GTGCAAGTCCAACCAGAATG -3'
(R):5'- gccaagaggggagcatcag -3'
Posted On 2014-04-13