Incidental Mutation 'R1549:Tmed3'
ID169787
Institutional Source Beutler Lab
Gene Symbol Tmed3
Ensembl Gene ENSMUSG00000032353
Gene Nametransmembrane p24 trafficking protein 3
Synonyms1200002G13Rik
MMRRC Submission 039588-MU
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.088) question?
Stock #R1549 (G1)
Quality Score225
Status Validated
Chromosome9
Chromosomal Location89699206-89705068 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to C at 89699945 bp
ZygosityHeterozygous
Amino Acid Change Leucine to Arginine at position 155 (L155R)
Ref Sequence ENSEMBL: ENSMUSP00000058723 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000058488]
Predicted Effect probably damaging
Transcript: ENSMUST00000058488
AA Change: L155R

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000058723
Gene: ENSMUSG00000032353
AA Change: L155R

DomainStartEndE-ValueType
signal peptide 1 25 N/A INTRINSIC
EMP24_GP25L 32 210 1.23e-66 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000188808
Meta Mutation Damage Score 0.472 question?
Coding Region Coverage
  • 1x: 99.0%
  • 3x: 98.1%
  • 10x: 95.8%
  • 20x: 90.8%
Validation Efficiency 97% (58/60)
Allele List at MGI
Other mutations in this stock
Total: 51 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700006A11Rik A T 3: 124,416,792 I157K probably benign Het
Ank3 A T 10: 70,001,982 N727Y probably benign Het
Atg16l1 A G 1: 87,774,188 T251A probably benign Het
Bcl11b T A 12: 107,917,163 I226F probably damaging Het
Birc6 A G 17: 74,662,742 H4260R probably damaging Het
Camta1 A G 4: 151,586,463 I85T probably damaging Het
Cblb A G 16: 52,033,010 probably benign Het
Ccnd1 T G 7: 144,937,336 I178L probably benign Het
Clcn4 A G 7: 7,291,682 V329A probably damaging Het
Col17a1 C T 19: 47,648,910 probably benign Het
Col7a1 A G 9: 108,955,966 T254A unknown Het
Ctif C A 18: 75,565,025 R188L probably damaging Het
Cyp2c69 A T 19: 39,842,986 L461Q probably benign Het
Ddc A G 11: 11,846,656 probably null Het
Dpp10 T A 1: 123,341,380 probably null Het
Eef2 CCC CCCC 10: 81,178,768 probably null Het
Eif2b4 T C 5: 31,192,921 E19G possibly damaging Het
Fmnl2 A G 2: 53,105,537 E424G probably damaging Het
Galnt14 A G 17: 73,525,313 L269P possibly damaging Het
Gm14409 T C 2: 177,265,585 E40G probably damaging Het
Gm2381 T A 7: 42,822,401 H18L probably benign Het
Gpbp1 G T 13: 111,436,579 D326E probably benign Het
Gpr162 C T 6: 124,860,088 R331H probably damaging Het
Iigp1 G A 18: 60,389,876 G22D probably benign Het
Kcns3 T C 12: 11,092,083 H205R probably damaging Het
Klk1b26 C T 7: 44,016,402 probably benign Het
Lime1 A G 2: 181,383,376 Y242C probably benign Het
Manba A G 3: 135,544,806 D398G probably damaging Het
Mapk3 A T 7: 126,763,512 K219* probably null Het
Mdfic G T 6: 15,799,845 G324C probably damaging Het
Mdga1 G A 17: 29,837,998 H837Y probably damaging Het
Nck1 T A 9: 100,497,872 M109L probably benign Het
Olfr1369-ps1 T C 13: 21,116,118 V142A probably benign Het
Olfr412 A G 11: 74,365,250 I194V probably benign Het
Pabpc1l G T 2: 164,037,171 V313F possibly damaging Het
Phf3 C T 1: 30,804,842 V1679I probably benign Het
Pou4f1 T C 14: 104,467,640 I32V probably benign Het
Pspc1 T G 14: 56,748,941 H351P probably damaging Het
Ptk7 T C 17: 46,572,652 E829G probably damaging Het
Rab23 A G 1: 33,738,297 Y164C possibly damaging Het
Slc36a3 A G 11: 55,142,770 W141R probably damaging Het
Slc7a14 T C 3: 31,224,118 E446G possibly damaging Het
Stim2 G A 5: 54,105,325 R303Q probably damaging Het
Tbcd A G 11: 121,560,753 I550V probably benign Het
Trav16d-dv11 A G 14: 53,047,342 probably benign Het
Ubap2 C T 4: 41,199,872 A752T probably benign Het
Usp16 G T 16: 87,464,834 V113F probably damaging Het
Vmn2r12 T G 5: 109,092,830 Y139S probably benign Het
Vmn2r5 G T 3: 64,504,000 D382E probably damaging Het
Zfp217 A C 2: 170,114,470 N869K probably benign Het
Zswim2 G T 2: 83,923,748 D189E probably benign Het
Other mutations in Tmed3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01472:Tmed3 APN 9 89702875 missense probably benign 0.15
IGL01978:Tmed3 APN 9 89704753 missense probably benign 0.00
R0359:Tmed3 UTSW 9 89699789 missense possibly damaging 0.84
R0399:Tmed3 UTSW 9 89702873 missense possibly damaging 0.91
R1707:Tmed3 UTSW 9 89702780 missense probably damaging 1.00
R4287:Tmed3 UTSW 9 89704898 missense probably benign 0.23
R5080:Tmed3 UTSW 9 89699772 nonsense probably null
R5151:Tmed3 UTSW 9 89699772 nonsense probably null
R5153:Tmed3 UTSW 9 89699772 nonsense probably null
R6750:Tmed3 UTSW 9 89699790 missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- GTGCAAAGATCAGATATGTGCGCC -3'
(R):5'- AGTGCTTAACACAGACCCCTCAGAG -3'

Sequencing Primer
(F):5'- TGTAGGAACCTGAGACCCG -3'
(R):5'- TCAGAGGTGCCAGGAATTTGC -3'
Posted On2014-04-13