Mutagenetix > Incidental Mutation

Incidental Mutation 'R1560:2610021A01Rik'

170548

Institutional Source

Beutler Lab

Gene Symbol

2610021A01Rik

Ensembl Gene

ENSMUSG00000091474

Gene Name

RIKEN cDNA 2610021A01 gene

Synonyms

MMRRC Submission

039599-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.072) question?

Stock #

R1560 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

41248654-41277957 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 41275466 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Alanine at position 390 (T390A)

Ref Sequence

ENSEMBL: ENSMUSP00000127760 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000163475]

AlphaFold

E9Q0Q3

Predicted Effect

probably benign
Transcript: ENSMUST00000163475
AA Change: T390A

PolyPhen 2 Score 0.087 (Sensitivity: 0.93; Specificity: 0.85)

SMART Domains

Protein: ENSMUSP00000127760
Gene: ENSMUSG00000091474
AA Change: T390A

Domain	Start	End	E-Value	Type
KRAB	18	78	1.32e-32	SMART
ZnF_C2H2	415	437	4.54e-4	SMART
ZnF_C2H2	443	465	3.69e-4	SMART
ZnF_C2H2	471	493	5.14e-3	SMART
ZnF_C2H2	499	521	4.94e-5	SMART
ZnF_C2H2	527	549	3.16e-3	SMART
ZnF_C2H2	555	577	3.16e-3	SMART
ZnF_C2H2	583	605	8.6e-5	SMART
ZnF_C2H2	611	633	1.79e-2	SMART
ZnF_C2H2	639	661	2.43e-4	SMART
ZnF_C2H2	667	689	1.72e-4	SMART
ZnF_C2H2	695	717	9.73e-4	SMART
ZnF_C2H2	723	745	2.02e-1	SMART
ZnF_C2H2	751	773	1.69e-3	SMART
ZnF_C2H2	779	801	3.69e-4	SMART
ZnF_C2H2	807	829	7.37e-4	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000206757

Coding Region Coverage

1x: 99.1%
3x: 98.3%
10x: 96.3%
20x: 92.6%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 49 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adamts8	T	A	9: 30,867,963 (GRCm39)	C596S	probably damaging	Het
Avl9	T	A	6: 56,702,113 (GRCm39)	Y89*	probably null	Het
Cacna1e	G	A	1: 154,296,850 (GRCm39)	R18*	probably null	Het
Cacng2	A	G	15: 77,897,518 (GRCm39)	F97S	probably benign	Het
Calu	A	G	6: 29,361,657 (GRCm39)	D107G	probably benign	Het
Capns2	G	A	8: 93,628,771 (GRCm39)	R220Q	probably damaging	Het
Catsperb	C	T	12: 101,591,985 (GRCm39)	T1105I	probably benign	Het
Cep350	T	C	1: 155,804,825 (GRCm39)	N753D	possibly damaging	Het
D6Ertd527e	C	G	6: 87,088,506 (GRCm39)	T223S	unknown	Het
Dnah5	G	T	15: 28,420,149 (GRCm39)	V3816F	probably damaging	Het
Dzip3	T	C	16: 48,771,903 (GRCm39)		probably null	Het
Ep400	A	T	5: 110,818,972 (GRCm39)		probably null	Het
Epb41l2	T	A	10: 25,371,334 (GRCm39)		probably null	Het
Fetub	T	C	16: 22,758,117 (GRCm39)	V300A	probably benign	Het
Gabrb3	A	T	7: 57,466,043 (GRCm39)	M308L	probably damaging	Het
Galnt16	A	T	12: 80,648,566 (GRCm39)	D546V	possibly damaging	Het
Gimap8	G	T	6: 48,633,068 (GRCm39)	G296W	probably damaging	Het
Gpr158	A	G	2: 21,831,125 (GRCm39)	K742E	probably damaging	Het
Hmbs	T	C	9: 44,248,657 (GRCm39)	H72R	possibly damaging	Het
Krt16	A	G	11: 100,137,475 (GRCm39)	I410T	probably damaging	Het
Lamb3	G	A	1: 193,021,710 (GRCm39)	A971T	probably benign	Het
Lilra6	A	C	7: 3,914,407 (GRCm39)		probably null	Het
Mroh7	A	T	4: 106,568,451 (GRCm39)	M418K	possibly damaging	Het
Myh11	T	A	16: 14,044,484 (GRCm39)	K640*	probably null	Het
Nsd1	T	A	13: 55,394,533 (GRCm39)	C711*	probably null	Het
Or1j17	T	A	2: 36,578,155 (GRCm39)	L47Q	probably damaging	Het
Or2ak5	A	T	11: 58,611,513 (GRCm39)	Y120*	probably null	Het
Or3a10	A	G	11: 73,935,441 (GRCm39)	S220P	probably damaging	Het
Or4c111	T	C	2: 88,843,550 (GRCm39)	Y286C	probably damaging	Het
Otop3	A	T	11: 115,235,289 (GRCm39)	H307L	possibly damaging	Het
Plekhm3	T	C	1: 64,976,976 (GRCm39)	T165A	probably benign	Het
Poldip3	G	A	15: 83,022,527 (GRCm39)	R86W	probably damaging	Het
Rif1	A	T	2: 52,001,143 (GRCm39)	R1532S	probably damaging	Het
Sf3b1	C	G	1: 55,058,554 (GRCm39)	E12Q	possibly damaging	Het
Slc27a6	T	A	18: 58,712,904 (GRCm39)	L242*	probably null	Het
Spata45	T	C	1: 190,772,017 (GRCm39)	S80P	probably benign	Het
Taf4	A	G	2: 179,577,746 (GRCm39)	V525A	probably benign	Het
Tbck	A	G	3: 132,543,809 (GRCm39)	T887A	probably damaging	Het
Tnrc6c	C	T	11: 117,650,463 (GRCm39)	T1571I	probably damaging	Het
Trim38	A	G	13: 23,966,685 (GRCm39)	Y44C	probably benign	Het
Tsg101	A	T	7: 46,542,208 (GRCm39)		probably null	Het
Tsku	T	A	7: 98,002,151 (GRCm39)	D60V	probably damaging	Het
Ttc28	G	A	5: 111,373,543 (GRCm39)	S962N	probably damaging	Het
Upf1	G	A	8: 70,791,092 (GRCm39)	P550L	probably damaging	Het
Vipr2	A	G	12: 116,058,401 (GRCm39)	D106G	probably benign	Het
Vps13c	T	C	9: 67,843,745 (GRCm39)		probably null	Het
Washc4	T	C	10: 83,391,973 (GRCm39)	Y220H	probably damaging	Het
Wdr81	C	T	11: 75,342,449 (GRCm39)	W939*	probably null	Het
Zfp512b	T	C	2: 181,230,472 (GRCm39)	T473A	probably benign	Het

Other mutations in 2610021A01Rik

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00565:2610021A01Rik	APN	7	41,274,996 (GRCm39)	missense	possibly damaging	0.61
IGL00566:2610021A01Rik	APN	7	41,274,815 (GRCm39)	missense	possibly damaging	0.53
R0940:2610021A01Rik	UTSW	7	41,275,858 (GRCm39)	missense	probably damaging	1.00
R1101:2610021A01Rik	UTSW	7	41,276,783 (GRCm39)	missense	probably damaging	1.00
R1180:2610021A01Rik	UTSW	7	41,275,141 (GRCm39)	missense	probably benign	0.41
R1740:2610021A01Rik	UTSW	7	41,275,549 (GRCm39)	nonsense	probably null
R1988:2610021A01Rik	UTSW	7	41,276,081 (GRCm39)	nonsense	probably null
R2041:2610021A01Rik	UTSW	7	41,275,403 (GRCm39)	missense	possibly damaging	0.63
R2964:2610021A01Rik	UTSW	7	41,275,829 (GRCm39)	nonsense	probably null
R2965:2610021A01Rik	UTSW	7	41,275,829 (GRCm39)	nonsense	probably null
R2966:2610021A01Rik	UTSW	7	41,275,829 (GRCm39)	nonsense	probably null
R4002:2610021A01Rik	UTSW	7	41,274,964 (GRCm39)	missense	possibly damaging	0.83
R4569:2610021A01Rik	UTSW	7	41,275,262 (GRCm39)	missense	probably benign	0.04
R4708:2610021A01Rik	UTSW	7	41,261,309 (GRCm39)	missense	probably damaging	1.00
R4880:2610021A01Rik	UTSW	7	41,276,529 (GRCm39)	missense	possibly damaging	0.47
R4933:2610021A01Rik	UTSW	7	41,276,226 (GRCm39)	missense	probably damaging	0.98
R5036:2610021A01Rik	UTSW	7	41,275,578 (GRCm39)	missense	possibly damaging	0.92
R5206:2610021A01Rik	UTSW	7	41,276,009 (GRCm39)	nonsense	probably null
R5235:2610021A01Rik	UTSW	7	41,274,256 (GRCm39)	missense	possibly damaging	0.53
R6449:2610021A01Rik	UTSW	7	41,275,298 (GRCm39)	nonsense	probably null
R6488:2610021A01Rik	UTSW	7	41,275,298 (GRCm39)	nonsense	probably null
R6904:2610021A01Rik	UTSW	7	41,275,516 (GRCm39)	nonsense	probably null
R7058:2610021A01Rik	UTSW	7	41,275,554 (GRCm39)	missense	possibly damaging	0.61
R7157:2610021A01Rik	UTSW	7	41,276,400 (GRCm39)	missense	probably damaging	1.00
R7392:2610021A01Rik	UTSW	7	41,275,990 (GRCm39)	missense	probably damaging	1.00
R7589:2610021A01Rik	UTSW	7	41,276,396 (GRCm39)	missense	probably damaging	1.00
R7648:2610021A01Rik	UTSW	7	41,261,886 (GRCm39)	missense	possibly damaging	0.51
R7785:2610021A01Rik	UTSW	7	41,262,617 (GRCm39)	missense	probably benign
R8153:2610021A01Rik	UTSW	7	41,275,157 (GRCm39)	missense	probably benign	0.00
R8199:2610021A01Rik	UTSW	7	41,275,304 (GRCm39)	missense	probably damaging	0.98
R8943:2610021A01Rik	UTSW	7	41,275,667 (GRCm39)	missense	probably damaging	0.98
R9052:2610021A01Rik	UTSW	7	41,275,449 (GRCm39)	missense	probably benign	0.29
R9071:2610021A01Rik	UTSW	7	41,274,783 (GRCm39)	missense	probably benign
R9169:2610021A01Rik	UTSW	7	41,261,109 (GRCm39)	start gained	probably benign
R9209:2610021A01Rik	UTSW	7	41,275,837 (GRCm39)	missense	possibly damaging	0.79
R9281:2610021A01Rik	UTSW	7	41,274,184 (GRCm39)	missense	possibly damaging	0.73
R9530:2610021A01Rik	UTSW	7	41,274,165 (GRCm39)	missense	possibly damaging	0.53
R9612:2610021A01Rik	UTSW	7	41,276,327 (GRCm39)	missense	possibly damaging	0.73
X0067:2610021A01Rik	UTSW	7	41,276,741 (GRCm39)	missense	probably benign	0.09
Z1176:2610021A01Rik	UTSW	7	41,274,766 (GRCm39)	missense	probably benign	0.41

Predicted Primers

Posted On

2014-04-13