Incidental Mutation 'R1616:Arid1b'
ID |
174307 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Arid1b
|
Ensembl Gene |
ENSMUSG00000069729 |
Gene Name |
AT-rich interaction domain 1B |
Synonyms |
9330189K18Rik, B230217J03Rik |
MMRRC Submission |
039653-MU
|
Accession Numbers |
|
Essential gene? |
Probably essential
(E-score: 0.783)
|
Stock # |
R1616 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
17 |
Chromosomal Location |
5044607-5397931 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to A
at 5389569 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Isoleucine to Asparagine
at position 1705
(I1705N)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000156119
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000092723]
[ENSMUST00000115797]
[ENSMUST00000115799]
[ENSMUST00000232180]
|
AlphaFold |
E9Q4N7 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000092723
AA Change: I1652N
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000090398 Gene: ENSMUSG00000069729 AA Change: I1652N
Domain | Start | End | E-Value | Type |
low complexity region
|
2 |
51 |
N/A |
INTRINSIC |
low complexity region
|
69 |
132 |
N/A |
INTRINSIC |
low complexity region
|
139 |
150 |
N/A |
INTRINSIC |
low complexity region
|
201 |
224 |
N/A |
INTRINSIC |
low complexity region
|
232 |
247 |
N/A |
INTRINSIC |
low complexity region
|
257 |
276 |
N/A |
INTRINSIC |
low complexity region
|
301 |
371 |
N/A |
INTRINSIC |
low complexity region
|
379 |
407 |
N/A |
INTRINSIC |
low complexity region
|
438 |
476 |
N/A |
INTRINSIC |
low complexity region
|
485 |
499 |
N/A |
INTRINSIC |
low complexity region
|
538 |
558 |
N/A |
INTRINSIC |
low complexity region
|
574 |
591 |
N/A |
INTRINSIC |
low complexity region
|
596 |
611 |
N/A |
INTRINSIC |
low complexity region
|
615 |
640 |
N/A |
INTRINSIC |
low complexity region
|
691 |
707 |
N/A |
INTRINSIC |
low complexity region
|
719 |
740 |
N/A |
INTRINSIC |
low complexity region
|
743 |
773 |
N/A |
INTRINSIC |
low complexity region
|
805 |
816 |
N/A |
INTRINSIC |
low complexity region
|
912 |
930 |
N/A |
INTRINSIC |
low complexity region
|
936 |
952 |
N/A |
INTRINSIC |
low complexity region
|
974 |
985 |
N/A |
INTRINSIC |
low complexity region
|
1036 |
1045 |
N/A |
INTRINSIC |
ARID
|
1057 |
1147 |
9.9e-33 |
SMART |
BRIGHT
|
1061 |
1152 |
7.62e-41 |
SMART |
low complexity region
|
1166 |
1177 |
N/A |
INTRINSIC |
low complexity region
|
1257 |
1268 |
N/A |
INTRINSIC |
low complexity region
|
1336 |
1364 |
N/A |
INTRINSIC |
low complexity region
|
1426 |
1456 |
N/A |
INTRINSIC |
low complexity region
|
1473 |
1486 |
N/A |
INTRINSIC |
low complexity region
|
1579 |
1595 |
N/A |
INTRINSIC |
coiled coil region
|
1724 |
1745 |
N/A |
INTRINSIC |
low complexity region
|
1835 |
1843 |
N/A |
INTRINSIC |
Pfam:DUF3518
|
1933 |
2189 |
1.5e-152 |
PFAM |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000115797
AA Change: I1653N
PolyPhen 2
Score 0.996 (Sensitivity: 0.55; Specificity: 0.98)
|
SMART Domains |
Protein: ENSMUSP00000111463 Gene: ENSMUSG00000069729 AA Change: I1653N
Domain | Start | End | E-Value | Type |
low complexity region
|
17 |
80 |
N/A |
INTRINSIC |
low complexity region
|
87 |
98 |
N/A |
INTRINSIC |
low complexity region
|
149 |
172 |
N/A |
INTRINSIC |
low complexity region
|
180 |
195 |
N/A |
INTRINSIC |
low complexity region
|
205 |
224 |
N/A |
INTRINSIC |
low complexity region
|
249 |
319 |
N/A |
INTRINSIC |
low complexity region
|
327 |
355 |
N/A |
INTRINSIC |
low complexity region
|
386 |
424 |
N/A |
INTRINSIC |
low complexity region
|
433 |
447 |
N/A |
INTRINSIC |
low complexity region
|
486 |
506 |
N/A |
INTRINSIC |
low complexity region
|
522 |
539 |
N/A |
INTRINSIC |
low complexity region
|
544 |
559 |
N/A |
INTRINSIC |
low complexity region
|
563 |
588 |
N/A |
INTRINSIC |
low complexity region
|
639 |
655 |
N/A |
INTRINSIC |
low complexity region
|
667 |
688 |
N/A |
INTRINSIC |
low complexity region
|
691 |
721 |
N/A |
INTRINSIC |
low complexity region
|
753 |
764 |
N/A |
INTRINSIC |
low complexity region
|
860 |
878 |
N/A |
INTRINSIC |
low complexity region
|
884 |
900 |
N/A |
INTRINSIC |
low complexity region
|
922 |
933 |
N/A |
INTRINSIC |
Blast:ARID
|
981 |
1028 |
1e-8 |
BLAST |
low complexity region
|
1029 |
1054 |
N/A |
INTRINSIC |
ARID
|
1058 |
1148 |
9.9e-33 |
SMART |
BRIGHT
|
1062 |
1153 |
7.62e-41 |
SMART |
low complexity region
|
1167 |
1178 |
N/A |
INTRINSIC |
low complexity region
|
1258 |
1269 |
N/A |
INTRINSIC |
low complexity region
|
1337 |
1365 |
N/A |
INTRINSIC |
low complexity region
|
1427 |
1457 |
N/A |
INTRINSIC |
low complexity region
|
1474 |
1487 |
N/A |
INTRINSIC |
low complexity region
|
1580 |
1596 |
N/A |
INTRINSIC |
coiled coil region
|
1725 |
1746 |
N/A |
INTRINSIC |
low complexity region
|
1836 |
1844 |
N/A |
INTRINSIC |
Pfam:DUF3518
|
1935 |
2190 |
6.3e-121 |
PFAM |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000115799
AA Change: I1171N
PolyPhen 2
Score 0.996 (Sensitivity: 0.55; Specificity: 0.98)
|
SMART Domains |
Protein: ENSMUSP00000111465 Gene: ENSMUSG00000069729 AA Change: I1171N
Domain | Start | End | E-Value | Type |
low complexity region
|
34 |
54 |
N/A |
INTRINSIC |
low complexity region
|
70 |
87 |
N/A |
INTRINSIC |
low complexity region
|
92 |
107 |
N/A |
INTRINSIC |
low complexity region
|
111 |
136 |
N/A |
INTRINSIC |
low complexity region
|
187 |
203 |
N/A |
INTRINSIC |
low complexity region
|
215 |
236 |
N/A |
INTRINSIC |
low complexity region
|
271 |
282 |
N/A |
INTRINSIC |
low complexity region
|
378 |
396 |
N/A |
INTRINSIC |
low complexity region
|
402 |
418 |
N/A |
INTRINSIC |
low complexity region
|
440 |
451 |
N/A |
INTRINSIC |
Blast:ARID
|
499 |
546 |
1e-8 |
BLAST |
low complexity region
|
547 |
572 |
N/A |
INTRINSIC |
ARID
|
576 |
666 |
9.9e-33 |
SMART |
BRIGHT
|
580 |
671 |
7.62e-41 |
SMART |
low complexity region
|
685 |
696 |
N/A |
INTRINSIC |
low complexity region
|
776 |
787 |
N/A |
INTRINSIC |
low complexity region
|
855 |
883 |
N/A |
INTRINSIC |
low complexity region
|
945 |
975 |
N/A |
INTRINSIC |
low complexity region
|
992 |
1005 |
N/A |
INTRINSIC |
low complexity region
|
1098 |
1114 |
N/A |
INTRINSIC |
coiled coil region
|
1243 |
1264 |
N/A |
INTRINSIC |
low complexity region
|
1354 |
1362 |
N/A |
INTRINSIC |
Pfam:DUF3518
|
1452 |
1708 |
1.1e-152 |
PFAM |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000232180
AA Change: I1705N
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
Coding Region Coverage |
- 1x: 98.8%
- 3x: 97.8%
- 10x: 94.3%
- 20x: 85.3%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This locus encodes an AT-rich DNA interacting domain-containing protein. The encoded protein is a component of the SWI/SNF chromatin remodeling complex and may play a role in cell-cycle activation. The protein encoded by this locus is similar to AT-rich interactive domain-containing protein 1A. These two proteins function as alternative, mutually exclusive ARID-subunits of the SWI/SNF complex. The associated complexes play opposing roles. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2016]
|
Allele List at MGI |
All alleles(61) : Targeted(2) Gene trapped(59)
|
Other mutations in this stock |
Total: 90 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
4933406P04Rik |
T |
C |
10: 20,187,087 (GRCm39) |
|
probably benign |
Het |
A1cf |
A |
G |
19: 31,912,175 (GRCm39) |
E430G |
probably damaging |
Het |
Aacs |
T |
A |
5: 125,561,590 (GRCm39) |
|
probably null |
Het |
Acot12 |
G |
A |
13: 91,920,886 (GRCm39) |
V331I |
probably benign |
Het |
Acp7 |
A |
G |
7: 28,310,503 (GRCm39) |
W445R |
probably damaging |
Het |
Actl11 |
C |
A |
9: 107,809,135 (GRCm39) |
Q1153K |
probably benign |
Het |
Actr8 |
A |
G |
14: 29,704,601 (GRCm39) |
T34A |
possibly damaging |
Het |
Ahnak |
A |
G |
19: 8,986,351 (GRCm39) |
D2545G |
possibly damaging |
Het |
Ap5z1 |
A |
G |
5: 142,457,991 (GRCm39) |
Y388C |
probably benign |
Het |
Apol7a |
C |
T |
15: 77,273,806 (GRCm39) |
G219S |
probably damaging |
Het |
Bod1l |
T |
C |
5: 41,966,058 (GRCm39) |
Q2669R |
probably benign |
Het |
Braf |
A |
T |
6: 39,620,067 (GRCm39) |
S504T |
probably benign |
Het |
Cbl |
A |
T |
9: 44,064,197 (GRCm39) |
Y780N |
probably damaging |
Het |
Cd86 |
T |
C |
16: 36,449,338 (GRCm39) |
I20V |
probably benign |
Het |
Cep290 |
T |
G |
10: 100,404,698 (GRCm39) |
D2353E |
probably benign |
Het |
Ckmt2 |
G |
A |
13: 92,007,328 (GRCm39) |
R289C |
probably benign |
Het |
Col3a1 |
T |
C |
1: 45,367,648 (GRCm39) |
|
probably null |
Het |
Cyp4f16 |
T |
A |
17: 32,761,942 (GRCm39) |
Y163* |
probably null |
Het |
Dimt1 |
T |
C |
13: 107,089,958 (GRCm39) |
V227A |
possibly damaging |
Het |
Dnah6 |
A |
T |
6: 73,077,095 (GRCm39) |
M2338K |
probably benign |
Het |
Dock4 |
T |
G |
12: 40,719,044 (GRCm39) |
I274S |
probably damaging |
Het |
Enthd1 |
T |
C |
15: 80,336,586 (GRCm39) |
D616G |
probably damaging |
Het |
Fignl2 |
T |
C |
15: 100,951,997 (GRCm39) |
E95G |
probably damaging |
Het |
Foxn1 |
A |
G |
11: 78,249,692 (GRCm39) |
M611T |
probably benign |
Het |
Foxs1 |
T |
C |
2: 152,774,559 (GRCm39) |
S165G |
probably benign |
Het |
Fzd3 |
G |
T |
14: 65,472,956 (GRCm39) |
Q271K |
probably benign |
Het |
Hadhb |
A |
T |
5: 30,371,713 (GRCm39) |
I55F |
probably damaging |
Het |
Hipk3 |
G |
A |
2: 104,264,090 (GRCm39) |
Q824* |
probably null |
Het |
Hps1 |
G |
A |
19: 42,755,624 (GRCm39) |
R201W |
probably damaging |
Het |
Kif21b |
T |
C |
1: 136,099,423 (GRCm39) |
S1477P |
probably damaging |
Het |
Kif26a |
A |
T |
12: 112,123,680 (GRCm39) |
|
probably null |
Het |
Krt90 |
T |
C |
15: 101,469,026 (GRCm39) |
E172G |
possibly damaging |
Het |
Lama4 |
T |
G |
10: 38,951,446 (GRCm39) |
F1064V |
probably damaging |
Het |
Leng9 |
A |
G |
7: 4,151,902 (GRCm39) |
V258A |
probably benign |
Het |
Lgi2 |
A |
C |
5: 52,703,980 (GRCm39) |
V217G |
probably benign |
Het |
Lpgat1 |
T |
C |
1: 191,495,741 (GRCm39) |
I310T |
possibly damaging |
Het |
Ltbp3 |
A |
G |
19: 5,796,995 (GRCm39) |
Y374C |
probably damaging |
Het |
Magi2 |
C |
A |
5: 20,814,324 (GRCm39) |
T1075K |
probably damaging |
Het |
Man2c1 |
T |
C |
9: 57,042,793 (GRCm39) |
I221T |
probably benign |
Het |
Mydgf |
A |
G |
17: 56,486,415 (GRCm39) |
M72T |
possibly damaging |
Het |
Myo1b |
T |
C |
1: 51,815,474 (GRCm39) |
N624S |
probably damaging |
Het |
Myo5c |
T |
A |
9: 75,203,299 (GRCm39) |
M1465K |
probably damaging |
Het |
Nek4 |
A |
T |
14: 30,709,094 (GRCm39) |
D716V |
probably damaging |
Het |
Nfxl1 |
T |
A |
5: 72,686,380 (GRCm39) |
Q607L |
probably benign |
Het |
Nlrp9c |
A |
T |
7: 26,083,862 (GRCm39) |
D572E |
probably benign |
Het |
Nop14 |
G |
T |
5: 34,807,757 (GRCm39) |
Q402K |
possibly damaging |
Het |
Npy5r |
C |
G |
8: 67,134,052 (GRCm39) |
C247S |
probably damaging |
Het |
Nrap |
T |
A |
19: 56,378,255 (GRCm39) |
I19F |
probably damaging |
Het |
Or4c102 |
A |
G |
2: 88,422,352 (GRCm39) |
D68G |
probably damaging |
Het |
Or51t4 |
T |
A |
7: 102,597,721 (GRCm39) |
N16K |
probably damaging |
Het |
Or6z3 |
T |
G |
7: 6,463,744 (GRCm39) |
S79A |
probably damaging |
Het |
Pcdh9 |
A |
T |
14: 94,124,405 (GRCm39) |
Y588* |
probably null |
Het |
Ppp1r12a |
A |
G |
10: 108,096,728 (GRCm39) |
E183G |
probably damaging |
Het |
Ppp2r2b |
T |
A |
18: 42,821,375 (GRCm39) |
H261L |
probably benign |
Het |
Ptch1 |
G |
T |
13: 63,687,656 (GRCm39) |
T374K |
possibly damaging |
Het |
Ptpn13 |
A |
T |
5: 103,713,103 (GRCm39) |
N1742I |
possibly damaging |
Het |
Rab33a |
C |
T |
X: 47,608,521 (GRCm39) |
S15L |
probably benign |
Het |
Ralb |
T |
C |
1: 119,405,744 (GRCm39) |
Y75C |
probably damaging |
Het |
Rassf7 |
T |
A |
7: 140,796,645 (GRCm39) |
V2D |
probably damaging |
Het |
Rbm10 |
A |
G |
X: 20,512,230 (GRCm39) |
N397S |
probably benign |
Het |
Rbm15 |
T |
C |
3: 107,238,197 (GRCm39) |
T734A |
probably benign |
Het |
Rbm8a |
G |
T |
3: 96,539,046 (GRCm39) |
|
probably benign |
Het |
Rock2 |
T |
C |
12: 17,022,986 (GRCm39) |
I1095T |
probably benign |
Het |
Rxfp3 |
T |
A |
15: 11,036,389 (GRCm39) |
T328S |
probably damaging |
Het |
Sec31a |
T |
A |
5: 100,534,054 (GRCm39) |
K505N |
possibly damaging |
Het |
Selenof |
A |
G |
3: 144,302,642 (GRCm39) |
*122W |
probably null |
Het |
Sh3pxd2b |
T |
C |
11: 32,331,441 (GRCm39) |
M55T |
possibly damaging |
Het |
Slc15a2 |
T |
C |
16: 36,574,843 (GRCm39) |
D522G |
probably benign |
Het |
Slc2a1 |
T |
C |
4: 118,993,503 (GRCm39) |
F447L |
probably damaging |
Het |
Slc45a2 |
T |
A |
15: 11,022,214 (GRCm39) |
C319S |
probably null |
Het |
Smad4 |
T |
C |
18: 73,773,333 (GRCm39) |
D551G |
probably benign |
Het |
Smarcc2 |
A |
G |
10: 128,318,662 (GRCm39) |
Y648C |
probably damaging |
Het |
Snrnp40 |
C |
G |
4: 130,271,836 (GRCm39) |
|
probably null |
Het |
Stab2 |
A |
T |
10: 86,721,582 (GRCm39) |
|
probably null |
Het |
Tanc1 |
A |
G |
2: 59,615,731 (GRCm39) |
D246G |
probably damaging |
Het |
Tekt3 |
T |
G |
11: 62,978,024 (GRCm39) |
|
probably null |
Het |
Them5 |
G |
A |
3: 94,253,567 (GRCm39) |
|
probably null |
Het |
Tlr4 |
T |
A |
4: 66,757,717 (GRCm39) |
F170Y |
probably damaging |
Het |
Tmem214 |
T |
G |
5: 31,028,907 (GRCm39) |
Y165* |
probably null |
Het |
Tmem94 |
T |
C |
11: 115,686,971 (GRCm39) |
|
probably null |
Het |
Tom1l1 |
A |
G |
11: 90,547,177 (GRCm39) |
L301S |
possibly damaging |
Het |
Trpm3 |
A |
G |
19: 22,960,076 (GRCm39) |
E1237G |
probably damaging |
Het |
Ube2d1 |
C |
A |
10: 71,092,523 (GRCm39) |
C107F |
probably damaging |
Het |
Ugt3a1 |
C |
T |
15: 9,306,330 (GRCm39) |
R160* |
probably null |
Het |
Vcan |
G |
A |
13: 89,853,782 (GRCm39) |
P393S |
probably damaging |
Het |
Virma |
T |
C |
4: 11,544,954 (GRCm39) |
F1638L |
probably damaging |
Het |
Vmn1r31 |
G |
A |
6: 58,449,043 (GRCm39) |
T274I |
probably damaging |
Het |
Xylt2 |
C |
T |
11: 94,559,035 (GRCm39) |
S445N |
probably damaging |
Het |
Zfp457 |
A |
G |
13: 67,444,375 (GRCm39) |
F43L |
possibly damaging |
Het |
Zfp879 |
T |
A |
11: 50,723,473 (GRCm39) |
M455L |
probably benign |
Het |
|
Other mutations in Arid1b |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00325:Arid1b
|
APN |
17 |
5,387,385 (GRCm39) |
missense |
possibly damaging |
0.77 |
IGL00340:Arid1b
|
APN |
17 |
5,371,559 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00886:Arid1b
|
APN |
17 |
5,177,254 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01161:Arid1b
|
APN |
17 |
5,392,674 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01391:Arid1b
|
APN |
17 |
5,369,133 (GRCm39) |
splice site |
probably benign |
|
IGL01456:Arid1b
|
APN |
17 |
5,341,510 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02152:Arid1b
|
APN |
17 |
5,364,243 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02288:Arid1b
|
APN |
17 |
5,314,315 (GRCm39) |
missense |
possibly damaging |
0.88 |
IGL02713:Arid1b
|
APN |
17 |
5,393,286 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02858:Arid1b
|
APN |
17 |
5,392,166 (GRCm39) |
missense |
possibly damaging |
0.92 |
IGL02885:Arid1b
|
APN |
17 |
5,392,428 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02989:Arid1b
|
APN |
17 |
5,385,322 (GRCm39) |
missense |
probably damaging |
1.00 |
FR4449:Arid1b
|
UTSW |
17 |
5,045,864 (GRCm39) |
small insertion |
probably benign |
|
PIT4142001:Arid1b
|
UTSW |
17 |
5,389,518 (GRCm39) |
missense |
probably damaging |
1.00 |
R0048:Arid1b
|
UTSW |
17 |
5,364,309 (GRCm39) |
critical splice donor site |
probably null |
|
R0124:Arid1b
|
UTSW |
17 |
5,389,605 (GRCm39) |
missense |
probably damaging |
1.00 |
R0153:Arid1b
|
UTSW |
17 |
5,393,207 (GRCm39) |
missense |
probably damaging |
1.00 |
R0465:Arid1b
|
UTSW |
17 |
5,046,535 (GRCm39) |
missense |
possibly damaging |
0.68 |
R0825:Arid1b
|
UTSW |
17 |
5,392,453 (GRCm39) |
missense |
probably damaging |
1.00 |
R1172:Arid1b
|
UTSW |
17 |
5,389,575 (GRCm39) |
missense |
probably damaging |
1.00 |
R1468:Arid1b
|
UTSW |
17 |
5,293,197 (GRCm39) |
missense |
probably damaging |
0.99 |
R1468:Arid1b
|
UTSW |
17 |
5,293,197 (GRCm39) |
missense |
probably damaging |
0.99 |
R1754:Arid1b
|
UTSW |
17 |
5,329,476 (GRCm39) |
critical splice acceptor site |
probably null |
|
R1760:Arid1b
|
UTSW |
17 |
5,392,088 (GRCm39) |
missense |
probably damaging |
0.97 |
R1812:Arid1b
|
UTSW |
17 |
5,387,304 (GRCm39) |
missense |
probably benign |
0.10 |
R1911:Arid1b
|
UTSW |
17 |
5,393,241 (GRCm39) |
missense |
probably damaging |
1.00 |
R3874:Arid1b
|
UTSW |
17 |
5,386,790 (GRCm39) |
splice site |
probably null |
|
R3913:Arid1b
|
UTSW |
17 |
5,392,532 (GRCm39) |
missense |
possibly damaging |
0.94 |
R3916:Arid1b
|
UTSW |
17 |
5,392,928 (GRCm39) |
missense |
probably benign |
0.25 |
R3922:Arid1b
|
UTSW |
17 |
5,393,316 (GRCm39) |
missense |
probably damaging |
0.97 |
R4119:Arid1b
|
UTSW |
17 |
5,046,069 (GRCm39) |
unclassified |
probably benign |
|
R4290:Arid1b
|
UTSW |
17 |
5,090,938 (GRCm39) |
missense |
probably damaging |
1.00 |
R4291:Arid1b
|
UTSW |
17 |
5,090,938 (GRCm39) |
missense |
probably damaging |
1.00 |
R4352:Arid1b
|
UTSW |
17 |
5,147,859 (GRCm39) |
missense |
possibly damaging |
0.93 |
R4386:Arid1b
|
UTSW |
17 |
5,045,247 (GRCm39) |
unclassified |
probably benign |
|
R4458:Arid1b
|
UTSW |
17 |
5,293,191 (GRCm39) |
missense |
probably damaging |
0.99 |
R4524:Arid1b
|
UTSW |
17 |
5,147,895 (GRCm39) |
missense |
possibly damaging |
0.93 |
R4622:Arid1b
|
UTSW |
17 |
5,045,325 (GRCm39) |
unclassified |
probably benign |
|
R4723:Arid1b
|
UTSW |
17 |
5,387,565 (GRCm39) |
missense |
probably benign |
0.01 |
R4782:Arid1b
|
UTSW |
17 |
5,389,496 (GRCm39) |
missense |
probably damaging |
1.00 |
R4799:Arid1b
|
UTSW |
17 |
5,389,496 (GRCm39) |
missense |
probably damaging |
1.00 |
R4910:Arid1b
|
UTSW |
17 |
5,392,478 (GRCm39) |
missense |
probably damaging |
1.00 |
R4946:Arid1b
|
UTSW |
17 |
5,393,118 (GRCm39) |
missense |
probably damaging |
0.99 |
R5083:Arid1b
|
UTSW |
17 |
5,364,293 (GRCm39) |
missense |
possibly damaging |
0.54 |
R5204:Arid1b
|
UTSW |
17 |
5,393,316 (GRCm39) |
missense |
probably damaging |
0.97 |
R5347:Arid1b
|
UTSW |
17 |
5,341,332 (GRCm39) |
nonsense |
probably null |
|
R5553:Arid1b
|
UTSW |
17 |
5,364,152 (GRCm39) |
missense |
probably damaging |
1.00 |
R5713:Arid1b
|
UTSW |
17 |
5,387,091 (GRCm39) |
missense |
probably damaging |
1.00 |
R5820:Arid1b
|
UTSW |
17 |
5,046,529 (GRCm39) |
missense |
possibly damaging |
0.96 |
R5992:Arid1b
|
UTSW |
17 |
5,045,231 (GRCm39) |
unclassified |
probably benign |
|
R6038:Arid1b
|
UTSW |
17 |
5,386,957 (GRCm39) |
missense |
probably benign |
0.07 |
R6038:Arid1b
|
UTSW |
17 |
5,386,957 (GRCm39) |
missense |
probably benign |
0.07 |
R6153:Arid1b
|
UTSW |
17 |
5,293,107 (GRCm39) |
missense |
probably damaging |
1.00 |
R6222:Arid1b
|
UTSW |
17 |
5,377,922 (GRCm39) |
critical splice acceptor site |
probably null |
|
R6249:Arid1b
|
UTSW |
17 |
5,329,636 (GRCm39) |
missense |
possibly damaging |
0.61 |
R6279:Arid1b
|
UTSW |
17 |
5,392,274 (GRCm39) |
missense |
probably damaging |
1.00 |
R6329:Arid1b
|
UTSW |
17 |
5,387,538 (GRCm39) |
nonsense |
probably null |
|
R6368:Arid1b
|
UTSW |
17 |
5,382,808 (GRCm39) |
missense |
possibly damaging |
0.64 |
R6466:Arid1b
|
UTSW |
17 |
5,377,953 (GRCm39) |
missense |
probably damaging |
1.00 |
R6861:Arid1b
|
UTSW |
17 |
5,377,961 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7008:Arid1b
|
UTSW |
17 |
5,341,254 (GRCm39) |
missense |
probably damaging |
1.00 |
R7270:Arid1b
|
UTSW |
17 |
5,046,318 (GRCm39) |
missense |
unknown |
|
R7514:Arid1b
|
UTSW |
17 |
5,391,989 (GRCm39) |
missense |
probably benign |
0.28 |
R7519:Arid1b
|
UTSW |
17 |
5,046,128 (GRCm39) |
small insertion |
probably benign |
|
R7519:Arid1b
|
UTSW |
17 |
5,046,119 (GRCm39) |
small insertion |
probably benign |
|
R7521:Arid1b
|
UTSW |
17 |
5,392,865 (GRCm39) |
missense |
probably benign |
0.06 |
R7521:Arid1b
|
UTSW |
17 |
5,046,119 (GRCm39) |
small insertion |
probably benign |
|
R7521:Arid1b
|
UTSW |
17 |
5,046,135 (GRCm39) |
small insertion |
probably benign |
|
R7616:Arid1b
|
UTSW |
17 |
5,045,661 (GRCm39) |
missense |
unknown |
|
R7654:Arid1b
|
UTSW |
17 |
5,341,360 (GRCm39) |
missense |
possibly damaging |
0.46 |
R7711:Arid1b
|
UTSW |
17 |
5,387,095 (GRCm39) |
missense |
probably benign |
0.28 |
R7828:Arid1b
|
UTSW |
17 |
5,147,943 (GRCm39) |
missense |
probably damaging |
1.00 |
R7864:Arid1b
|
UTSW |
17 |
5,392,530 (GRCm39) |
missense |
probably damaging |
1.00 |
R7998:Arid1b
|
UTSW |
17 |
5,377,959 (GRCm39) |
missense |
probably damaging |
1.00 |
R8105:Arid1b
|
UTSW |
17 |
5,341,518 (GRCm39) |
missense |
possibly damaging |
0.81 |
R8260:Arid1b
|
UTSW |
17 |
5,382,788 (GRCm39) |
missense |
probably benign |
0.03 |
R8374:Arid1b
|
UTSW |
17 |
5,392,919 (GRCm39) |
missense |
possibly damaging |
0.95 |
R8779:Arid1b
|
UTSW |
17 |
5,391,809 (GRCm39) |
missense |
probably benign |
0.03 |
R8801:Arid1b
|
UTSW |
17 |
5,387,103 (GRCm39) |
missense |
probably benign |
0.05 |
R8894:Arid1b
|
UTSW |
17 |
5,377,668 (GRCm39) |
missense |
probably damaging |
0.98 |
R8982:Arid1b
|
UTSW |
17 |
5,293,316 (GRCm39) |
missense |
probably damaging |
0.98 |
R9034:Arid1b
|
UTSW |
17 |
5,387,180 (GRCm39) |
missense |
probably benign |
0.01 |
R9272:Arid1b
|
UTSW |
17 |
5,386,879 (GRCm39) |
missense |
possibly damaging |
0.80 |
R9300:Arid1b
|
UTSW |
17 |
5,293,274 (GRCm39) |
missense |
probably damaging |
1.00 |
R9332:Arid1b
|
UTSW |
17 |
5,045,584 (GRCm39) |
missense |
unknown |
|
R9481:Arid1b
|
UTSW |
17 |
5,369,007 (GRCm39) |
missense |
probably damaging |
1.00 |
R9493:Arid1b
|
UTSW |
17 |
5,046,423 (GRCm39) |
missense |
unknown |
|
R9512:Arid1b
|
UTSW |
17 |
5,391,864 (GRCm39) |
missense |
probably benign |
0.00 |
R9548:Arid1b
|
UTSW |
17 |
5,385,262 (GRCm39) |
missense |
probably damaging |
1.00 |
RF007:Arid1b
|
UTSW |
17 |
5,045,869 (GRCm39) |
small insertion |
probably benign |
|
RF008:Arid1b
|
UTSW |
17 |
5,045,870 (GRCm39) |
small insertion |
probably benign |
|
RF008:Arid1b
|
UTSW |
17 |
5,045,869 (GRCm39) |
small insertion |
probably benign |
|
RF025:Arid1b
|
UTSW |
17 |
5,045,871 (GRCm39) |
small insertion |
probably benign |
|
RF025:Arid1b
|
UTSW |
17 |
5,045,863 (GRCm39) |
small insertion |
probably benign |
|
RF028:Arid1b
|
UTSW |
17 |
5,045,873 (GRCm39) |
small insertion |
probably benign |
|
RF032:Arid1b
|
UTSW |
17 |
5,045,863 (GRCm39) |
small insertion |
probably benign |
|
RF033:Arid1b
|
UTSW |
17 |
5,045,860 (GRCm39) |
small insertion |
probably benign |
|
RF041:Arid1b
|
UTSW |
17 |
5,045,870 (GRCm39) |
small insertion |
probably benign |
|
RF045:Arid1b
|
UTSW |
17 |
5,045,858 (GRCm39) |
small insertion |
probably benign |
|
RF046:Arid1b
|
UTSW |
17 |
5,045,865 (GRCm39) |
small insertion |
probably benign |
|
RF058:Arid1b
|
UTSW |
17 |
5,045,858 (GRCm39) |
small insertion |
probably benign |
|
X0023:Arid1b
|
UTSW |
17 |
5,392,668 (GRCm39) |
missense |
probably benign |
0.39 |
X0027:Arid1b
|
UTSW |
17 |
5,392,647 (GRCm39) |
nonsense |
probably null |
|
Z1177:Arid1b
|
UTSW |
17 |
5,046,603 (GRCm39) |
missense |
possibly damaging |
0.70 |
|
Predicted Primers |
PCR Primer
(F):5'- TGCTAACGTCAGATGAAGCTGCAC -3'
(R):5'- TGGTTGAAGGCTGCACTACATGAG -3'
Sequencing Primer
(F):5'- TCCAGAGCCGAGGTTCATAA -3'
(R):5'- cacacacacacacacacacac -3'
|
Posted On |
2014-04-24 |