Incidental Mutation 'IGL01942:Slc35f4'
ID 180901
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Slc35f4
Ensembl Gene ENSMUSG00000021852
Gene Name solute carrier family 35, member F4
Synonyms 4930550L21Rik
Accession Numbers
Essential gene? Probably non essential (E-score: 0.178) question?
Stock # IGL01942
Quality Score
Status
Chromosome 14
Chromosomal Location 49535976-49763354 bp(-) (GRCm39)
Type of Mutation splice site
DNA Base Change (assembly) T to C at 49762962 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000154089 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000074368] [ENSMUST00000123534] [ENSMUST00000138884] [ENSMUST00000146164]
AlphaFold Q8BZK4
Predicted Effect probably benign
Transcript: ENSMUST00000074368
SMART Domains Protein: ENSMUSP00000073972
Gene: ENSMUSG00000021852

DomainStartEndE-ValueType
low complexity region 22 30 N/A INTRINSIC
transmembrane domain 123 145 N/A INTRINSIC
transmembrane domain 160 182 N/A INTRINSIC
Pfam:SLC35F 216 435 7.6e-8 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000123534
SMART Domains Protein: ENSMUSP00000122405
Gene: ENSMUSG00000021852

DomainStartEndE-ValueType
low complexity region 22 30 N/A INTRINSIC
transmembrane domain 123 145 N/A INTRINSIC
transmembrane domain 160 182 N/A INTRINSIC
transmembrane domain 217 234 N/A INTRINSIC
transmembrane domain 239 261 N/A INTRINSIC
transmembrane domain 274 296 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000138884
SMART Domains Protein: ENSMUSP00000119007
Gene: ENSMUSG00000021852

DomainStartEndE-ValueType
Pfam:EmrE 18 143 1e-12 PFAM
Pfam:EamA 57 135 8.4e-9 PFAM
Pfam:DUF914 68 314 4.8e-8 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000146164
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 38 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abcc6 G A 7: 45,635,997 (GRCm39) R1017W possibly damaging Het
Arhgef26 A G 3: 62,247,515 (GRCm39) R200G probably benign Het
Arid4b A T 13: 14,310,749 (GRCm39) probably benign Het
Atp1a2 A C 1: 172,113,876 (GRCm39) S369A probably benign Het
Bag3 T A 7: 128,148,024 (GRCm39) D546E probably benign Het
Bcl6b T A 11: 70,117,569 (GRCm39) Y379F probably damaging Het
Cbln2 T C 18: 86,734,450 (GRCm39) V136A probably benign Het
Ccnf A T 17: 24,461,294 (GRCm39) D120E probably benign Het
Cd14 T A 18: 36,858,693 (GRCm39) H254L possibly damaging Het
Chd3 A G 11: 69,240,931 (GRCm39) probably null Het
Csf2rb G A 15: 78,224,692 (GRCm39) R150H probably benign Het
Dhx35 T C 2: 158,673,784 (GRCm39) L405P probably damaging Het
Dpf1 G A 7: 29,015,927 (GRCm39) C383Y probably damaging Het
Dse T A 10: 34,031,989 (GRCm39) Q345L probably benign Het
Gnaz A G 10: 74,850,706 (GRCm39) M244V probably damaging Het
Gpr65 A T 12: 98,241,974 (GRCm39) Y209F possibly damaging Het
Inpp5f T C 7: 128,269,493 (GRCm39) I281T probably damaging Het
Kntc1 T C 5: 123,916,330 (GRCm39) F721S probably damaging Het
Mapk8ip2 G A 15: 89,341,220 (GRCm39) probably null Het
Med24 G A 11: 98,600,508 (GRCm39) R646W probably damaging Het
Nup98 A T 7: 101,843,918 (GRCm39) F102Y probably damaging Het
Or1n2 A G 2: 36,797,869 (GRCm39) M304V probably benign Het
Or4c35 G T 2: 89,808,322 (GRCm39) V67L probably benign Het
Or8g50 A T 9: 39,648,962 (GRCm39) M284L possibly damaging Het
Pgap3 T C 11: 98,288,780 (GRCm39) Y125C probably damaging Het
Rasl12 T C 9: 65,315,644 (GRCm39) V96A probably damaging Het
Rbm20 G A 19: 53,801,874 (GRCm39) M127I probably damaging Het
Rnf114 T A 2: 167,354,546 (GRCm39) probably null Het
Serpinb1b C T 13: 33,269,294 (GRCm39) T9I possibly damaging Het
Setd1b T A 5: 123,301,489 (GRCm39) F16I possibly damaging Het
Slc25a28 A G 19: 43,652,947 (GRCm39) F238S probably damaging Het
Slc2a2 T C 3: 28,759,952 (GRCm39) V30A probably damaging Het
Socs4 T A 14: 47,528,107 (GRCm39) C347* probably null Het
Spock1 C T 13: 57,578,141 (GRCm39) E367K probably damaging Het
Ubap2 C T 4: 41,251,608 (GRCm39) R8H probably benign Het
Vmn1r44 T A 6: 89,870,806 (GRCm39) M41K probably benign Het
Vmn2r129 C T 4: 156,690,549 (GRCm39) noncoding transcript Het
Zfp575 T C 7: 24,285,240 (GRCm39) T134A possibly damaging Het
Other mutations in Slc35f4
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01511:Slc35f4 APN 14 49,536,334 (GRCm39) missense probably benign 0.15
IGL01640:Slc35f4 APN 14 49,556,225 (GRCm39) missense probably damaging 0.99
IGL01990:Slc35f4 APN 14 49,541,626 (GRCm39) critical splice donor site probably null
IGL02097:Slc35f4 APN 14 49,543,703 (GRCm39) missense probably damaging 1.00
IGL02803:Slc35f4 APN 14 49,541,714 (GRCm39) missense probably benign 0.00
R0005:Slc35f4 UTSW 14 49,559,943 (GRCm39) splice site probably benign
R0238:Slc35f4 UTSW 14 49,541,713 (GRCm39) missense possibly damaging 0.78
R0238:Slc35f4 UTSW 14 49,541,713 (GRCm39) missense possibly damaging 0.78
R0239:Slc35f4 UTSW 14 49,541,713 (GRCm39) missense possibly damaging 0.78
R0239:Slc35f4 UTSW 14 49,541,713 (GRCm39) missense possibly damaging 0.78
R0764:Slc35f4 UTSW 14 49,543,796 (GRCm39) splice site probably benign
R1884:Slc35f4 UTSW 14 49,551,091 (GRCm39) missense probably damaging 1.00
R1916:Slc35f4 UTSW 14 49,541,380 (GRCm39) intron probably benign
R2047:Slc35f4 UTSW 14 49,541,029 (GRCm39) intron probably benign
R2239:Slc35f4 UTSW 14 49,543,660 (GRCm39) critical splice donor site probably null
R2380:Slc35f4 UTSW 14 49,543,660 (GRCm39) critical splice donor site probably null
R4273:Slc35f4 UTSW 14 49,541,758 (GRCm39) missense possibly damaging 0.81
R4420:Slc35f4 UTSW 14 49,551,034 (GRCm39) unclassified probably benign
R4425:Slc35f4 UTSW 14 49,556,307 (GRCm39) missense possibly damaging 0.85
R5261:Slc35f4 UTSW 14 49,540,946 (GRCm39) intron probably benign
R5398:Slc35f4 UTSW 14 49,536,304 (GRCm39) missense probably damaging 1.00
R5402:Slc35f4 UTSW 14 49,556,331 (GRCm39) missense probably damaging 1.00
R6310:Slc35f4 UTSW 14 49,559,914 (GRCm39) missense probably damaging 1.00
R6596:Slc35f4 UTSW 14 49,763,057 (GRCm39) missense probably damaging 1.00
R6729:Slc35f4 UTSW 14 49,556,417 (GRCm39) missense probably benign 0.16
R6864:Slc35f4 UTSW 14 49,556,310 (GRCm39) missense possibly damaging 0.55
R7427:Slc35f4 UTSW 14 49,536,355 (GRCm39) missense probably damaging 0.99
R7428:Slc35f4 UTSW 14 49,536,355 (GRCm39) missense probably damaging 0.99
R7559:Slc35f4 UTSW 14 49,541,732 (GRCm39) missense probably benign 0.03
R7596:Slc35f4 UTSW 14 49,543,666 (GRCm39) missense probably damaging 1.00
R7722:Slc35f4 UTSW 14 49,543,731 (GRCm39) missense probably benign 0.22
R8263:Slc35f4 UTSW 14 49,551,084 (GRCm39) missense probably damaging 1.00
R8525:Slc35f4 UTSW 14 49,541,681 (GRCm39) missense possibly damaging 0.56
R9198:Slc35f4 UTSW 14 49,556,377 (GRCm39) missense unknown
R9615:Slc35f4 UTSW 14 49,556,306 (GRCm39) missense probably benign 0.00
R9751:Slc35f4 UTSW 14 49,536,291 (GRCm39) missense possibly damaging 0.49
R9772:Slc35f4 UTSW 14 49,551,175 (GRCm39) missense probably damaging 1.00
Posted On 2014-05-07