Incidental Mutation 'IGL01972:Vmn1r69'
| ID |
181649 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Vmn1r69
|
| Ensembl Gene |
ENSMUSG00000091662 |
| Gene Name |
vomeronasal 1 receptor 69 |
| Synonyms |
V1re9 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.058)
|
| Stock # |
IGL01972
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
7 |
| Chromosomal Location |
10313683-10315414 bp(-) (GRCm39) |
| Type of Mutation |
nonsense |
| DNA Base Change (assembly) |
A to T
at 10314586 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Tyrosine to Stop codon
at position 48
(Y48*)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000154076
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000163658]
[ENSMUST00000176284]
[ENSMUST00000176707]
[ENSMUST00000226160]
[ENSMUST00000226190]
[ENSMUST00000226228]
[ENSMUST00000227853]
[ENSMUST00000228296]
[ENSMUST00000228638]
[ENSMUST00000228478]
|
| AlphaFold |
Q8VIC1 |
| Predicted Effect |
probably null
Transcript: ENSMUST00000163658
AA Change: Y48*
|
| SMART Domains |
Protein: ENSMUSP00000129646
Gene: ENSMUSG00000091662
AA Change: Y48*
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:V1R
|
50 |
307 |
3.3e-32 |
PFAM |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000176284
AA Change: Y48*
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000176707
AA Change: Y48*
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000226160
AA Change: Y48*
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000226190
AA Change: Y48*
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000226228
AA Change: Y48*
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000226990
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000227853
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000228296
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000228638
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000228478
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 23 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Ahr |
T |
G |
12: 35,554,448 (GRCm39) |
D557A |
possibly damaging |
Het |
| Akap11 |
T |
C |
14: 78,745,297 (GRCm39) |
Q1697R |
probably damaging |
Het |
| Alpi |
T |
A |
1: 87,027,431 (GRCm39) |
T312S |
probably damaging |
Het |
| Cacna1b |
C |
A |
2: 24,525,107 (GRCm39) |
|
probably null |
Het |
| Car5a |
C |
T |
8: 122,653,821 (GRCm39) |
|
probably null |
Het |
| Cubn |
T |
C |
2: 13,450,883 (GRCm39) |
T841A |
possibly damaging |
Het |
| Eml6 |
A |
T |
11: 29,788,451 (GRCm39) |
F545I |
possibly damaging |
Het |
| Fam114a2 |
G |
A |
11: 57,400,220 (GRCm39) |
T156I |
probably damaging |
Het |
| Fbxl21 |
C |
T |
13: 56,684,672 (GRCm39) |
R259* |
probably null |
Het |
| Fhip1b |
T |
C |
7: 105,039,352 (GRCm39) |
N5S |
probably damaging |
Het |
| Gm5117 |
C |
T |
8: 32,227,787 (GRCm39) |
|
noncoding transcript |
Het |
| Hc |
T |
C |
2: 34,873,784 (GRCm39) |
Y1650C |
probably damaging |
Het |
| Med12l |
C |
A |
3: 59,169,314 (GRCm39) |
T1568K |
probably damaging |
Het |
| Mtrex |
T |
C |
13: 113,017,595 (GRCm39) |
K853E |
probably damaging |
Het |
| Or2ag2b |
A |
G |
7: 106,417,739 (GRCm39) |
I150V |
probably benign |
Het |
| Or5g27 |
T |
C |
2: 85,410,117 (GRCm39) |
F178S |
probably damaging |
Het |
| Or6n1 |
G |
T |
1: 173,916,987 (GRCm39) |
C127F |
probably damaging |
Het |
| Orm3 |
A |
G |
4: 63,277,563 (GRCm39) |
S184G |
probably benign |
Het |
| Padi1 |
A |
G |
4: 140,546,170 (GRCm39) |
|
probably benign |
Het |
| Rnf133 |
T |
C |
6: 23,648,988 (GRCm39) |
T357A |
probably benign |
Het |
| Tmem17 |
A |
G |
11: 22,467,265 (GRCm39) |
S60G |
probably benign |
Het |
| Ubqlnl |
G |
T |
7: 103,798,904 (GRCm39) |
Q198K |
probably benign |
Het |
| Zfp658 |
G |
A |
7: 43,222,134 (GRCm39) |
W136* |
probably null |
Het |
|
| Other mutations in Vmn1r69 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00155:Vmn1r69
|
APN |
7 |
10,313,879 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL02339:Vmn1r69
|
APN |
7 |
10,314,645 (GRCm39) |
nonsense |
probably null |
|
|
IGL02424:Vmn1r69
|
APN |
7 |
10,314,585 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL02602:Vmn1r69
|
APN |
7 |
10,313,901 (GRCm39) |
missense |
probably benign |
0.14 |
|
IGL03271:Vmn1r69
|
APN |
7 |
10,314,596 (GRCm39) |
missense |
probably benign |
0.11 |
|
R0034:Vmn1r69
|
UTSW |
7 |
10,314,738 (GRCm39) |
intron |
probably benign |
|
|
R0052:Vmn1r69
|
UTSW |
7 |
10,314,327 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0096:Vmn1r69
|
UTSW |
7 |
10,313,985 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0539:Vmn1r69
|
UTSW |
7 |
10,314,874 (GRCm39) |
splice site |
probably benign |
|
|
R0604:Vmn1r69
|
UTSW |
7 |
10,314,581 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1681:Vmn1r69
|
UTSW |
7 |
10,314,179 (GRCm39) |
missense |
probably benign |
0.06 |
|
R1884:Vmn1r69
|
UTSW |
7 |
10,314,678 (GRCm39) |
missense |
probably benign |
0.00 |
|
R3741:Vmn1r69
|
UTSW |
7 |
10,314,069 (GRCm39) |
missense |
possibly damaging |
0.47 |
|
R4655:Vmn1r69
|
UTSW |
7 |
10,314,026 (GRCm39) |
missense |
probably benign |
0.03 |
|
R4735:Vmn1r69
|
UTSW |
7 |
10,314,926 (GRCm39) |
utr 5 prime |
probably benign |
|
|
R4758:Vmn1r69
|
UTSW |
7 |
10,314,473 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5582:Vmn1r69
|
UTSW |
7 |
10,314,435 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5966:Vmn1r69
|
UTSW |
7 |
10,314,717 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5977:Vmn1r69
|
UTSW |
7 |
10,314,417 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6458:Vmn1r69
|
UTSW |
7 |
10,314,365 (GRCm39) |
missense |
probably benign |
|
|
R6987:Vmn1r69
|
UTSW |
7 |
10,314,491 (GRCm39) |
start codon destroyed |
probably null |
0.99 |
|
R7133:Vmn1r69
|
UTSW |
7 |
10,314,995 (GRCm39) |
intron |
probably benign |
|
|
R7532:Vmn1r69
|
UTSW |
7 |
10,314,281 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R7878:Vmn1r69
|
UTSW |
7 |
10,314,717 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9100:Vmn1r69
|
UTSW |
7 |
10,314,064 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R9558:Vmn1r69
|
UTSW |
7 |
10,314,185 (GRCm39) |
missense |
probably benign |
|
|
Z1176:Vmn1r69
|
UTSW |
7 |
10,314,023 (GRCm39) |
missense |
possibly damaging |
0.64 |
|
| Posted On |
2014-05-07 |
Incidental Mutation