Incidental Mutation 'IGL02022:Pelp1'
| ID |
184021 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Pelp1
|
| Ensembl Gene |
ENSMUSG00000018921 |
| Gene Name |
proline, glutamic acid and leucine rich protein 1 |
| Synonyms |
4930563C04Rik, MNAR |
| Accession Numbers |
|
| Essential gene? |
Probably essential
(E-score: 0.959)
|
| Stock # |
IGL02022
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
11 |
| Chromosomal Location |
70283709-70300857 bp(-) (GRCm39) |
| Type of Mutation |
splice site |
| DNA Base Change (assembly) |
T to A
at 70297153 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000134014
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000019065]
[ENSMUST00000135148]
|
| AlphaFold |
Q9DBD5 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000019065
|
| SMART Domains |
Protein: ENSMUSP00000019065
Gene: ENSMUSG00000018921
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
2 |
45 |
N/A |
INTRINSIC |
|
Pfam:RIX1
|
63 |
232 |
7.5e-30 |
PFAM |
|
low complexity region
|
264 |
278 |
N/A |
INTRINSIC |
|
low complexity region
|
359 |
386 |
N/A |
INTRINSIC |
|
Pfam:NUC202
|
424 |
490 |
8.6e-30 |
PFAM |
|
Pfam:NUC202
|
570 |
644 |
6e-19 |
PFAM |
|
low complexity region
|
748 |
758 |
N/A |
INTRINSIC |
|
low complexity region
|
797 |
830 |
N/A |
INTRINSIC |
|
low complexity region
|
834 |
863 |
N/A |
INTRINSIC |
|
low complexity region
|
869 |
877 |
N/A |
INTRINSIC |
|
SCOP:d1sig__
|
892 |
958 |
9e-6 |
SMART |
|
low complexity region
|
974 |
989 |
N/A |
INTRINSIC |
|
low complexity region
|
993 |
1021 |
N/A |
INTRINSIC |
|
low complexity region
|
1070 |
1090 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000135148
|
| SMART Domains |
Protein: ENSMUSP00000134014
Gene: ENSMUSG00000018921
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
2 |
45 |
N/A |
INTRINSIC |
|
Pfam:RIX1
|
63 |
163 |
2.3e-9 |
PFAM |
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a transcription factor which coactivates transcription of estrogen receptor responsive genes and corepresses genes activated by other hormone receptors or sequence-specific transcription factors. Expression of this gene is regulated by both members of the estrogen receptor family. This gene may be involved in the progression of several types of cancer. Alternative splicing results in multiple transcript variants. [provided by RefSeq, May 2013]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 31 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 1700001J03Rik |
T |
C |
5: 146,120,358 (GRCm39) |
Y160C |
probably damaging |
Het |
| Abi3bp |
T |
C |
16: 56,412,999 (GRCm39) |
S314P |
probably damaging |
Het |
| Abra |
T |
C |
15: 41,732,802 (GRCm39) |
H88R |
probably benign |
Het |
| Bsn |
A |
G |
9: 107,987,617 (GRCm39) |
|
probably benign |
Het |
| Chd3 |
A |
C |
11: 69,251,886 (GRCm39) |
C123G |
probably damaging |
Het |
| Clca3b |
A |
C |
3: 144,547,171 (GRCm39) |
|
probably null |
Het |
| Cnot7 |
G |
T |
8: 40,952,386 (GRCm39) |
P190T |
probably damaging |
Het |
| Cps1 |
A |
T |
1: 67,212,031 (GRCm39) |
|
probably benign |
Het |
| Dennd2d |
A |
G |
3: 106,407,220 (GRCm39) |
T424A |
probably benign |
Het |
| Dnhd1 |
C |
T |
7: 105,327,516 (GRCm39) |
R54C |
probably damaging |
Het |
| Efhd1 |
G |
A |
1: 87,192,334 (GRCm39) |
E55K |
probably damaging |
Het |
| Ep300 |
T |
C |
15: 81,495,638 (GRCm39) |
|
probably benign |
Het |
| Ezh1 |
G |
T |
11: 101,090,166 (GRCm39) |
H529Q |
probably damaging |
Het |
| Klhl3 |
A |
T |
13: 58,198,878 (GRCm39) |
S201T |
possibly damaging |
Het |
| Krt1c |
A |
G |
15: 101,724,953 (GRCm39) |
F219S |
probably damaging |
Het |
| Lrp1b |
C |
T |
2: 41,172,172 (GRCm39) |
D751N |
probably damaging |
Het |
| Lyst |
T |
A |
13: 13,838,629 (GRCm39) |
C1848* |
probably null |
Het |
| Macf1 |
A |
G |
4: 123,284,842 (GRCm39) |
|
probably null |
Het |
| Med10 |
T |
C |
13: 69,961,819 (GRCm39) |
|
probably benign |
Het |
| Msh4 |
T |
A |
3: 153,592,593 (GRCm39) |
T170S |
probably damaging |
Het |
| Or52n3 |
T |
C |
7: 104,530,141 (GRCm39) |
C76R |
probably damaging |
Het |
| Prex2 |
G |
A |
1: 11,367,963 (GRCm39) |
V1595I |
probably benign |
Het |
| Prpf8 |
C |
T |
11: 75,392,660 (GRCm39) |
R1617* |
probably null |
Het |
| Rabep1 |
T |
A |
11: 70,825,385 (GRCm39) |
L684Q |
probably damaging |
Het |
| Slc22a4 |
G |
A |
11: 53,874,435 (GRCm39) |
|
probably benign |
Het |
| Smox |
T |
C |
2: 131,362,037 (GRCm39) |
F153S |
probably damaging |
Het |
| Tma16 |
A |
G |
8: 66,939,062 (GRCm39) |
|
probably null |
Het |
| Unc80 |
G |
T |
1: 66,665,675 (GRCm39) |
R1814L |
possibly damaging |
Het |
| Vmn2r108 |
C |
T |
17: 20,691,987 (GRCm39) |
D179N |
possibly damaging |
Het |
| Washc2 |
A |
G |
6: 116,236,126 (GRCm39) |
E1199G |
probably benign |
Het |
| Zic1 |
C |
A |
9: 91,244,525 (GRCm39) |
|
probably null |
Het |
|
| Other mutations in Pelp1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00540:Pelp1
|
APN |
11 |
70,285,638 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
IGL00819:Pelp1
|
APN |
11 |
70,285,444 (GRCm39) |
missense |
unknown |
|
|
IGL01017:Pelp1
|
APN |
11 |
70,287,720 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01347:Pelp1
|
APN |
11 |
70,286,505 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01460:Pelp1
|
APN |
11 |
70,284,790 (GRCm39) |
missense |
unknown |
|
|
IGL02188:Pelp1
|
APN |
11 |
70,300,718 (GRCm39) |
missense |
unknown |
|
|
ANU74:Pelp1
|
UTSW |
11 |
70,285,913 (GRCm39) |
missense |
probably damaging |
0.97 |
|
F5770:Pelp1
|
UTSW |
11 |
70,288,976 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R0056:Pelp1
|
UTSW |
11 |
70,284,658 (GRCm39) |
missense |
unknown |
|
|
R0201:Pelp1
|
UTSW |
11 |
70,286,530 (GRCm39) |
missense |
possibly damaging |
0.84 |
|
R0637:Pelp1
|
UTSW |
11 |
70,286,530 (GRCm39) |
missense |
possibly damaging |
0.84 |
|
R0879:Pelp1
|
UTSW |
11 |
70,286,123 (GRCm39) |
splice site |
probably benign |
|
|
R1073:Pelp1
|
UTSW |
11 |
70,287,416 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1858:Pelp1
|
UTSW |
11 |
70,285,568 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1937:Pelp1
|
UTSW |
11 |
70,284,541 (GRCm39) |
splice site |
probably null |
|
|
R1958:Pelp1
|
UTSW |
11 |
70,289,347 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R3613:Pelp1
|
UTSW |
11 |
70,286,261 (GRCm39) |
missense |
probably benign |
0.01 |
|
R3722:Pelp1
|
UTSW |
11 |
70,289,026 (GRCm39) |
missense |
possibly damaging |
0.62 |
|
R4176:Pelp1
|
UTSW |
11 |
70,287,693 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5137:Pelp1
|
UTSW |
11 |
70,285,925 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R5253:Pelp1
|
UTSW |
11 |
70,292,487 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5616:Pelp1
|
UTSW |
11 |
70,285,688 (GRCm39) |
missense |
possibly damaging |
0.73 |
|
R5911:Pelp1
|
UTSW |
11 |
70,287,740 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5938:Pelp1
|
UTSW |
11 |
70,285,693 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R6461:Pelp1
|
UTSW |
11 |
70,287,132 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7387:Pelp1
|
UTSW |
11 |
70,287,425 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7625:Pelp1
|
UTSW |
11 |
70,286,260 (GRCm39) |
missense |
probably benign |
0.03 |
|
R7694:Pelp1
|
UTSW |
11 |
70,285,585 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7873:Pelp1
|
UTSW |
11 |
70,285,552 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8478:Pelp1
|
UTSW |
11 |
70,285,146 (GRCm39) |
missense |
unknown |
|
|
R8719:Pelp1
|
UTSW |
11 |
70,292,789 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R8910:Pelp1
|
UTSW |
11 |
70,287,461 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R8918:Pelp1
|
UTSW |
11 |
70,296,505 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R9632:Pelp1
|
UTSW |
11 |
70,284,835 (GRCm39) |
missense |
unknown |
|
|
V7580:Pelp1
|
UTSW |
11 |
70,288,976 (GRCm39) |
missense |
probably damaging |
0.99 |
|
V7581:Pelp1
|
UTSW |
11 |
70,288,976 (GRCm39) |
missense |
probably damaging |
0.99 |
|
V7582:Pelp1
|
UTSW |
11 |
70,288,976 (GRCm39) |
missense |
probably damaging |
0.99 |
|
V7583:Pelp1
|
UTSW |
11 |
70,288,976 (GRCm39) |
missense |
probably damaging |
0.99 |
|
Z1088:Pelp1
|
UTSW |
11 |
70,287,716 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1177:Pelp1
|
UTSW |
11 |
70,287,920 (GRCm39) |
nonsense |
probably null |
|
|
| Posted On |
2014-05-07 |
Incidental Mutation