Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02027:Htr1f'

184216

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Htr1f

Ensembl Gene

ENSMUSG00000050783

Gene Name

5-hydroxytryptamine (serotonin) receptor 1F

Synonyms

Htr1eb

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

IGL02027

Quality Score

Status

Chromosome

Chromosomal Location

64745092-64926147 bp(-) (GRCm39)

Type of Mutation

nonsense

DNA Base Change (assembly)

T to A at 64746684 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Lysine to Stop codon at position 203 (K203*)

Ref Sequence

ENSEMBL: ENSMUSP00000063136 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000063076]

AlphaFold

Q02284

Predicted Effect

probably null
Transcript: ENSMUST00000063076
AA Change: K203*

SMART Domains

Protein: ENSMUSP00000063136
Gene: ENSMUSG00000050783
AA Change: K203*

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srx	32	230	4.8e-7	PFAM
Pfam:7TM_GPCR_Srsx	34	362	2.4e-10	PFAM
Pfam:7tm_1	40	347	4.1e-74	PFAM
Pfam:7TM_GPCR_Srv	54	249	5.2e-7	PFAM

Coding Region Coverage

Validation Efficiency

MGI Phenotype

PHENOTYPE: Mice homozygous for disruptions in this gene display decreased temperature sensitivity and physiological abnormalities in nerve fibers. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 45 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adipor1	A	G	1: 134,358,923 (GRCm39)	T312A	probably benign	Het
Begain	T	G	12: 109,000,235 (GRCm39)	K384Q	possibly damaging	Het
C2cd6	T	C	1: 59,099,763 (GRCm39)	I393V	probably benign	Het
Catsperz	A	G	19: 6,902,664 (GRCm39)	V5A	probably benign	Het
Cbx1	T	A	11: 96,692,315 (GRCm39)	F67L	probably damaging	Het
Ccn2	A	G	10: 24,472,307 (GRCm39)	S117G	probably damaging	Het
Ccn3	T	C	15: 54,611,330 (GRCm39)	V155A	probably damaging	Het
Cerkl	T	C	2: 79,171,630 (GRCm39)		probably benign	Het
Cubn	G	T	2: 13,292,405 (GRCm39)	D3259E	probably damaging	Het
Cyp2u1	A	G	3: 131,091,600 (GRCm39)	Y307H	probably damaging	Het
Dcaf6	A	C	1: 165,251,910 (GRCm39)	D71E	probably damaging	Het
Dclk3	A	T	9: 111,296,911 (GRCm39)	K152*	probably null	Het
Fcgbp	G	A	7: 27,774,629 (GRCm39)	D68N	probably damaging	Het
Gm6576	A	G	15: 27,025,952 (GRCm39)		noncoding transcript	Het
Has2	T	C	15: 56,531,567 (GRCm39)	T383A	probably damaging	Het
Il36g	A	T	2: 24,082,797 (GRCm39)	I191L	probably benign	Het
Iqgap3	T	C	3: 87,994,649 (GRCm39)	I116T	possibly damaging	Het
Itga1	C	T	13: 115,126,591 (GRCm39)		probably null	Het
Kif5b	T	C	18: 6,209,089 (GRCm39)	D891G	possibly damaging	Het
Krt74	T	C	15: 101,665,229 (GRCm39)		noncoding transcript	Het
Lama3	A	G	18: 12,649,570 (GRCm39)	K1776E	probably damaging	Het
Lats1	T	C	10: 7,588,712 (GRCm39)	S1110P	probably benign	Het
Lipo3	T	A	19: 33,557,919 (GRCm39)	K158*	probably null	Het
Lrrc9	T	A	12: 72,517,108 (GRCm39)		probably benign	Het
Met	A	G	6: 17,563,726 (GRCm39)		probably benign	Het
Mmp13	A	G	9: 7,272,955 (GRCm39)	Y105C	probably damaging	Het
Mtus1	T	C	8: 41,446,638 (GRCm39)	E1151G	probably damaging	Het
Nptx1	T	C	11: 119,435,422 (GRCm39)	D298G	possibly damaging	Het
Odad4	C	T	11: 100,460,728 (GRCm39)	T495M	probably damaging	Het
Pdlim1	T	C	19: 40,231,910 (GRCm39)	N156S	probably benign	Het
Pdzk1	A	G	3: 96,761,989 (GRCm39)		probably benign	Het
Pex5	A	G	6: 124,375,847 (GRCm39)	S448P	probably benign	Het
Polr3e	G	T	7: 120,530,186 (GRCm39)	R124L	probably damaging	Het
Ppp2r2c	C	T	5: 37,109,816 (GRCm39)	R392C	probably damaging	Het
Prpf4b	T	C	13: 35,073,554 (GRCm39)	I543T	probably benign	Het
Prr27	A	G	5: 87,991,302 (GRCm39)	S305G	possibly damaging	Het
Repin1	A	G	6: 48,573,407 (GRCm39)	H56R	probably damaging	Het
Ryr2	A	T	13: 11,611,998 (GRCm39)	L408H	probably damaging	Het
Sbf2	T	A	7: 110,060,348 (GRCm39)	Q205H	probably damaging	Het
Sgo2b	G	A	8: 64,379,863 (GRCm39)	P990S	probably benign	Het
Slc33a1	G	T	3: 63,855,562 (GRCm39)	P361Q	probably damaging	Het
Tmem98	T	C	11: 80,706,483 (GRCm39)		probably benign	Het
Vmn1r16	T	C	6: 57,300,044 (GRCm39)	T193A	possibly damaging	Het
Vmn1r5	T	A	6: 56,962,640 (GRCm39)	I105K	probably damaging	Het
Zfp473	A	T	7: 44,387,462 (GRCm39)		probably benign	Het

Other mutations in Htr1f

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00896:Htr1f	APN	16	64,746,469 (GRCm39)	missense	probably benign	0.00
IGL01134:Htr1f	APN	16	64,746,501 (GRCm39)	missense	probably benign	0.00
IGL01455:Htr1f	APN	16	64,746,385 (GRCm39)	missense	probably damaging	1.00
IGL01580:Htr1f	APN	16	64,746,198 (GRCm39)	nonsense	probably null
IGL01865:Htr1f	APN	16	64,746,282 (GRCm39)	missense	probably damaging	1.00
IGL02234:Htr1f	APN	16	64,746,430 (GRCm39)	missense	probably damaging	1.00
IGL02567:Htr1f	APN	16	64,746,611 (GRCm39)	missense	probably benign	0.45
R0035:Htr1f	UTSW	16	64,746,860 (GRCm39)	missense	probably damaging	1.00
R0131:Htr1f	UTSW	16	64,747,091 (GRCm39)	missense	probably damaging	1.00
R0131:Htr1f	UTSW	16	64,747,091 (GRCm39)	missense	probably damaging	1.00
R0132:Htr1f	UTSW	16	64,747,091 (GRCm39)	missense	probably damaging	1.00
R0193:Htr1f	UTSW	16	64,747,112 (GRCm39)	missense	probably damaging	1.00
R0523:Htr1f	UTSW	16	64,746,262 (GRCm39)	missense	probably damaging	1.00
R0722:Htr1f	UTSW	16	64,746,254 (GRCm39)	missense	probably damaging	0.99
R2055:Htr1f	UTSW	16	64,746,398 (GRCm39)	missense	probably damaging	1.00
R3418:Htr1f	UTSW	16	64,746,260 (GRCm39)	missense	probably damaging	1.00
R4090:Htr1f	UTSW	16	64,746,324 (GRCm39)	missense	probably benign	0.06
R4320:Htr1f	UTSW	16	64,747,050 (GRCm39)	missense	possibly damaging	0.87
R5037:Htr1f	UTSW	16	64,746,291 (GRCm39)	missense	probably damaging	1.00
R6004:Htr1f	UTSW	16	64,746,239 (GRCm39)	missense	probably damaging	1.00
R7383:Htr1f	UTSW	16	64,747,206 (GRCm39)	missense	probably benign	0.00
R7462:Htr1f	UTSW	16	64,746,383 (GRCm39)	missense	probably damaging	0.99
R7864:Htr1f	UTSW	16	64,747,157 (GRCm39)	missense	probably damaging	1.00
R8677:Htr1f	UTSW	16	64,746,414 (GRCm39)	missense	possibly damaging	0.69
R8816:Htr1f	UTSW	16	64,746,537 (GRCm39)	missense	probably benign	0.05
R8836:Htr1f	UTSW	16	64,747,196 (GRCm39)	missense	probably benign
R9106:Htr1f	UTSW	16	64,746,637 (GRCm39)	missense	probably damaging	1.00
R9155:Htr1f	UTSW	16	64,746,788 (GRCm39)	missense	probably benign	0.00
R9182:Htr1f	UTSW	16	64,746,825 (GRCm39)	missense	probably benign	0.03
R9244:Htr1f	UTSW	16	64,746,857 (GRCm39)	missense	probably benign	0.31
R9430:Htr1f	UTSW	16	64,746,831 (GRCm39)	missense	probably damaging	1.00
Z1176:Htr1f	UTSW	16	64,747,237 (GRCm39)	missense	probably benign
Z1176:Htr1f	UTSW	16	64,746,440 (GRCm39)	nonsense	probably null

Posted On

2014-05-07