Mutagenetix > Incidental Mutation

Incidental Mutation 'R1651:Fam98a'

186427

Institutional Source

Beutler Lab

Gene Symbol

Fam98a

Ensembl Gene

ENSMUSG00000002017

Gene Name

family with sequence similarity 98, member A

Synonyms

2810405J04Rik

MMRRC Submission

039687-MU

Accession Numbers

Essential gene?

Possibly essential (E-score: 0.678) question?

Stock #

R1651 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

75844081-75858941 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 75854710 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Alanine at position 33 (V33A)

Ref Sequence

ENSEMBL: ENSMUSP00000108126 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000112507]

AlphaFold

Q3TJZ6

Predicted Effect

probably benign
Transcript: ENSMUST00000112507
AA Change: V33A

PolyPhen 2 Score 0.155 (Sensitivity: 0.92; Specificity: 0.87)

SMART Domains

Protein: ENSMUSP00000108126
Gene: ENSMUSG00000002017
AA Change: V33A

Domain	Start	End	E-Value	Type
Pfam:DUF2465	11	328	1.1e-137	PFAM
low complexity region	334	396	N/A	INTRINSIC
low complexity region	401	441	N/A	INTRINSIC
low complexity region	448	481	N/A	INTRINSIC
low complexity region	485	501	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000141969

Meta Mutation Damage Score

0.0864

Coding Region Coverage

1x: 99.2%
3x: 98.4%
10x: 96.5%
20x: 93.0%

Validation Efficiency

97% (66/68)

Allele List at MGI

Other mutations in this stock

Total: 65 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abhd12	T	A	2: 150,690,341 (GRCm39)	Q118L	probably benign	Het
Acss1	A	T	2: 150,480,357 (GRCm39)	V238D	possibly damaging	Het
Adgrv1	T	C	13: 81,635,972 (GRCm39)	I3512M	probably benign	Het
Arhgap32	A	G	9: 32,171,096 (GRCm39)	Q1292R	probably damaging	Het
Bpnt2	A	G	4: 4,792,737 (GRCm39)	F123L	probably damaging	Het
Caskin1	C	T	17: 24,721,186 (GRCm39)	R509C	possibly damaging	Het
Cd47	T	C	16: 49,714,591 (GRCm39)	V147A	possibly damaging	Het
Cdc20b	T	A	13: 113,215,258 (GRCm39)	Y275*	probably null	Het
Chd4	A	G	6: 125,100,547 (GRCm39)	D1745G	possibly damaging	Het
Crmp1	T	A	5: 37,430,783 (GRCm39)	S250T	probably damaging	Het
Crybg2	A	G	4: 133,802,214 (GRCm39)	K1125E	probably benign	Het
Crybg2	C	A	4: 133,802,136 (GRCm39)	P1099T	possibly damaging	Het
Csf1r	T	A	18: 61,243,473 (GRCm39)	I163N	possibly damaging	Het
Dicer1	T	C	12: 104,675,064 (GRCm39)	T733A	probably damaging	Het
Edar	A	G	10: 58,441,875 (GRCm39)	V339A	possibly damaging	Het
Efcab3	A	G	11: 104,611,492 (GRCm39)	R445G	probably benign	Het
Efcab6	A	G	15: 83,755,194 (GRCm39)	I1374T	possibly damaging	Het
Erbb2	G	A	11: 98,324,283 (GRCm39)	R757K	probably damaging	Het
Farp2	T	C	1: 93,531,191 (GRCm39)		probably null	Het
Fcmr	A	G	1: 130,805,988 (GRCm39)	T315A	probably benign	Het
Gdf9	G	A	11: 53,324,576 (GRCm39)	R115Q	probably damaging	Het
Gm22697+Rbm27	AGGTCCAGGCCCAGGCCCTGGTCCTGGCCCTGGCCCTGGTCCCGGCCCAGGCCC	AGGTCCCGGCCCAGGCCC	18: 42,434,948 (GRCm39)		probably benign	Het
H2-M10.1	A	G	17: 36,636,648 (GRCm39)	V52A	probably damaging	Het
Hspg2	T	A	4: 137,260,748 (GRCm39)	C1582*	probably null	Het
Icam2	C	T	11: 106,268,782 (GRCm39)	V229M	probably damaging	Het
Itga7	C	T	10: 128,784,693 (GRCm39)	P735L	probably benign	Het
Kbtbd3	C	A	9: 4,330,589 (GRCm39)	P321Q	possibly damaging	Het
Kcnma1	T	A	14: 23,364,262 (GRCm39)	T997S	probably damaging	Het
Kifc5b	T	C	17: 27,144,504 (GRCm39)	F541S	probably damaging	Het
Klhdc9	C	A	1: 171,188,016 (GRCm39)	V72L	probably benign	Het
Krt84	G	A	15: 101,434,398 (GRCm39)	S523F	possibly damaging	Het
Lrrtm4	A	G	6: 79,999,511 (GRCm39)	T308A	probably benign	Het
Map1b	T	C	13: 99,569,091 (GRCm39)	E1210G	unknown	Het
Mocs3	A	G	2: 168,073,489 (GRCm39)	Y312C	probably damaging	Het
Mrps7	G	T	11: 115,495,581 (GRCm39)	E40*	probably null	Het
Msantd5f1	A	T	4: 73,605,621 (GRCm39)	N344I	possibly damaging	Het
Msln	T	C	17: 25,972,382 (GRCm39)	H50R	probably benign	Het
Myb	A	G	10: 21,002,097 (GRCm39)	F748S	probably damaging	Het
Myo10	C	A	15: 25,742,455 (GRCm39)	H590N	probably damaging	Het
Naip5	T	C	13: 100,358,419 (GRCm39)	E939G	probably benign	Het
Nbeal1	T	A	1: 60,239,278 (GRCm39)	V107E	probably damaging	Het
Nrcam	A	T	12: 44,623,462 (GRCm39)	N1011I	probably damaging	Het
Or14c44	A	G	7: 86,057,078 (GRCm39)		probably benign	Het
Or1ak2	T	C	2: 36,827,335 (GRCm39)	L68P	probably damaging	Het
Or4c118	A	C	2: 88,975,346 (GRCm39)	V7G	probably damaging	Het
Pcgf6	A	T	19: 47,037,441 (GRCm39)	C153S	probably damaging	Het
Phrf1	T	C	7: 140,817,434 (GRCm39)	V81A	probably benign	Het
Ppp4r4	A	G	12: 103,550,331 (GRCm39)	N36D	probably benign	Het
Prkch	A	G	12: 73,805,775 (GRCm39)	T517A	possibly damaging	Het
Rasal1	A	T	5: 120,790,910 (GRCm39)	K33*	probably null	Het
Rp1l1	G	A	14: 64,268,442 (GRCm39)	E1343K	probably damaging	Het
Serpinb6e	T	C	13: 34,020,406 (GRCm39)	D234G	probably benign	Het
Setd2	A	G	9: 110,378,932 (GRCm39)	S632G	probably benign	Het
Smyd3	T	G	1: 178,871,441 (GRCm39)	I313L	probably benign	Het
Tdrd9	C	A	12: 111,991,140 (GRCm39)	D543E	probably damaging	Het
Tet1	A	G	10: 62,715,453 (GRCm39)	L114P	probably damaging	Het
Tmprss11c	G	A	5: 86,387,283 (GRCm39)	P212S	probably damaging	Het
Tmx2	A	T	2: 84,506,461 (GRCm39)	M77K	probably damaging	Het
Traf3	T	G	12: 111,228,470 (GRCm39)	D560E	probably damaging	Het
Trappc12	C	T	12: 28,741,776 (GRCm39)	M711I	probably benign	Het
Trim2	A	G	3: 84,074,957 (GRCm39)		probably null	Het
Vmn2r18	A	G	5: 151,485,464 (GRCm39)	S677P	probably damaging	Het
Wdr7	T	A	18: 63,853,847 (GRCm39)	L60*	probably null	Het
Wdr93	T	C	7: 79,399,830 (GRCm39)	F140L	probably benign	Het
Zfp638	A	G	6: 83,931,719 (GRCm39)	T802A	probably benign	Het

Other mutations in Fam98a

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00337:Fam98a	APN	17	75,858,742 (GRCm39)	missense	probably damaging	1.00
IGL00548:Fam98a	APN	17	75,845,813 (GRCm39)	missense	probably damaging	1.00
IGL02170:Fam98a	APN	17	75,847,187 (GRCm39)	critical splice acceptor site	probably null
IGL02399:Fam98a	APN	17	75,845,936 (GRCm39)	splice site	probably benign
IGL03062:Fam98a	APN	17	75,847,100 (GRCm39)	splice site	probably benign
IGL03246:Fam98a	APN	17	75,845,848 (GRCm39)	missense	probably damaging	0.99
R0584:Fam98a	UTSW	17	75,851,772 (GRCm39)	missense	probably damaging	1.00
R0594:Fam98a	UTSW	17	75,845,482 (GRCm39)	nonsense	probably null
R1121:Fam98a	UTSW	17	75,845,529 (GRCm39)	missense	unknown
R1366:Fam98a	UTSW	17	75,846,381 (GRCm39)	splice site	probably benign
R1387:Fam98a	UTSW	17	75,845,264 (GRCm39)	missense	unknown
R1424:Fam98a	UTSW	17	75,847,173 (GRCm39)	missense	probably damaging	1.00
R1533:Fam98a	UTSW	17	75,848,276 (GRCm39)	missense	probably damaging	1.00
R2211:Fam98a	UTSW	17	75,845,940 (GRCm39)	critical splice donor site	probably null
R4295:Fam98a	UTSW	17	75,848,342 (GRCm39)	missense	probably damaging	1.00
R4350:Fam98a	UTSW	17	75,848,220 (GRCm39)	missense	probably damaging	1.00
R4963:Fam98a	UTSW	17	75,845,977 (GRCm39)	missense	probably damaging	0.99
R5320:Fam98a	UTSW	17	75,845,810 (GRCm39)	missense	probably damaging	1.00
R5383:Fam98a	UTSW	17	75,845,576 (GRCm39)	missense	unknown
R6031:Fam98a	UTSW	17	75,846,427 (GRCm39)	missense	probably damaging	0.98
R6031:Fam98a	UTSW	17	75,846,427 (GRCm39)	missense	probably damaging	0.98
R7058:Fam98a	UTSW	17	75,845,384 (GRCm39)	missense	unknown
R7182:Fam98a	UTSW	17	75,846,013 (GRCm39)	nonsense	probably null
R7505:Fam98a	UTSW	17	75,845,233 (GRCm39)	missense	unknown
R7554:Fam98a	UTSW	17	75,854,670 (GRCm39)	nonsense	probably null
R7566:Fam98a	UTSW	17	75,854,657 (GRCm39)	missense	probably damaging	1.00
R8095:Fam98a	UTSW	17	75,845,766 (GRCm39)	missense	probably damaging	1.00
R8467:Fam98a	UTSW	17	75,851,830 (GRCm39)	missense	probably damaging	1.00
R8790:Fam98a	UTSW	17	75,854,684 (GRCm39)	missense	possibly damaging	0.93
R8827:Fam98a	UTSW	17	75,851,824 (GRCm39)	missense	possibly damaging	0.74
R9375:Fam98a	UTSW	17	75,848,330 (GRCm39)	missense	possibly damaging	0.55
R9625:Fam98a	UTSW	17	75,845,474 (GRCm39)	missense	unknown

Predicted Primers

PCR Primer
(F):5'- AAGAACATCCGAAATTCTAGTAGCCACC -3'
(R):5'- GCAGCGATCATTTGATTGGTTCCTTT -3'

Sequencing Primer
(F):5'- aatcccaacactcagcagg -3'
(R):5'- tccccagggctgagataac -3'

Posted On

2014-05-09