Mutagenetix > Incidental Mutation

Incidental Mutation 'R1662:Fat4'

186819

Institutional Source

Beutler Lab

Gene Symbol

Fat4

Ensembl Gene

ENSMUSG00000046743

Gene Name

FAT atypical cadherin 4

Synonyms

6030410K14Rik

MMRRC Submission

039698-MU

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

R1662 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

38941089-39066134 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 39034928 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Aspartic acid at position 2860 (V2860D)

Ref Sequence

ENSEMBL: ENSMUSP00000061836 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000061260]

AlphaFold

no structure available at present

Predicted Effect

probably damaging
Transcript: ENSMUST00000061260
AA Change: V2860D

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000061836
Gene: ENSMUSG00000046743
AA Change: V2860D

Domain	Start	End	E-Value	Type
low complexity region	2	21	N/A	INTRINSIC
CA	60	133	4.09e-7	SMART
CA	157	248	4.51e-18	SMART
CA	272	351	7.66e-30	SMART
CA	380	473	2.55e-17	SMART
CA	497	580	8.27e-26	SMART
CA	605	687	6.46e-28	SMART
CA	711	791	1e-24	SMART
CA	815	891	3.78e-20	SMART
CA	915	994	8.6e-24	SMART
CA	1018	1098	7.09e-25	SMART
CA	1122	1208	6.78e-22	SMART
CA	1232	1313	2.63e-28	SMART
CA	1337	1418	7.25e-31	SMART
CA	1442	1527	4.58e-19	SMART
CA	1550	1629	4.52e-9	SMART
CA	1651	1738	1.3e-9	SMART
CA	1762	1839	2.01e-24	SMART
CA	1863	1942	3.11e-21	SMART
CA	1966	2049	5.85e-26	SMART
CA	2072	2152	1.88e-29	SMART
CA	2176	2257	3.06e-29	SMART
CA	2282	2362	2.61e-23	SMART
CA	2386	2466	2.99e-32	SMART
CA	2490	2568	9.92e-6	SMART
CA	2588	2669	6.58e-20	SMART
CA	2692	2773	7.25e-31	SMART
CA	2796	2872	1.69e-22	SMART
CA	2896	2983	3.16e-22	SMART
CA	3007	3089	1.01e-15	SMART
CA	3113	3194	1.25e-25	SMART
CA	3218	3298	7e-15	SMART
CA	3322	3405	3.96e-14	SMART
CA	3428	3510	3.41e-27	SMART
CA	3532	3614	5.64e-19	SMART
EGF	3807	3862	1.78e-2	SMART
EGF_CA	3864	3900	2.36e-16	SMART
EGF_CA	3902	3938	7.99e-14	SMART
EGF	3943	3976	1.24e-1	SMART
LamG	3996	4144	4.08e-19	SMART
EGF	4167	4200	5.88e-3	SMART
LamG	4244	4375	1.76e-23	SMART
EGF	4430	4464	1.41e-5	SMART
low complexity region	4514	4526	N/A	INTRINSIC
low complexity region	4533	4550	N/A	INTRINSIC
low complexity region	4840	4849	N/A	INTRINSIC

Coding Region Coverage

1x: 99.1%
3x: 98.3%
10x: 96.2%
20x: 92.3%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a member of the protocadherin family. This gene may play a role in regulating planar cell polarity (PCP). Studies in mice suggest that loss of PCP signaling may cause cystic kidney disease, and mutations in this gene have been associated with Van Maldergem Syndrome 2. Alternatively spliced transcript variants have been noted for this gene. [provided by RefSeq, Mar 2014]
PHENOTYPE: Homozygous inactivation of this gene leads to neonatal lethality, reduced birth body size, curly tails, kyphosis, small lungs, renal cysts, and defects in sternum and vertebrae morphology, neural tube width, cochlear elongation, stereocilia orientation, kidney development, and intestinal elongation. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 76 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
5730409E04Rik	T	A	4: 126,505,475 (GRCm39)	M1K	probably null	Het
5730507C01Rik	A	C	12: 18,581,967 (GRCm39)	R119S	possibly damaging	Het
Abca1	T	A	4: 53,090,251 (GRCm39)		probably null	Het
Aff1	G	A	5: 103,988,923 (GRCm39)	G830D	probably damaging	Het
AI987944	T	C	7: 41,023,873 (GRCm39)	T369A	possibly damaging	Het
Aoah	A	G	13: 21,184,283 (GRCm39)		probably null	Het
Arhgap40	C	G	2: 158,381,190 (GRCm39)	C349W	probably damaging	Het
Atic	T	A	1: 71,615,286 (GRCm39)	D438E	probably benign	Het
Barhl2	A	T	5: 106,601,365 (GRCm39)	M338K	probably benign	Het
Btd	T	C	14: 31,388,747 (GRCm39)	V156A	probably damaging	Het
Catspere2	A	G	1: 177,874,552 (GRCm39)	K140E	unknown	Het
Ccdc82	T	C	9: 13,262,397 (GRCm39)	V319A	probably damaging	Het
Celsr1	G	T	15: 85,915,263 (GRCm39)	N903K	probably damaging	Het
Cenpf	T	A	1: 189,389,968 (GRCm39)	N1288I	probably damaging	Het
Ciao1	G	A	2: 127,086,857 (GRCm39)	T252I	probably benign	Het
Cma2	T	C	14: 56,210,573 (GRCm39)	C87R	probably damaging	Het
Cops7a	T	A	6: 124,939,401 (GRCm39)	R83W	probably damaging	Het
Cxcr6	A	T	9: 123,639,613 (GRCm39)	M205L	possibly damaging	Het
Dcc	A	G	18: 71,553,409 (GRCm39)	L749P	probably benign	Het
Dync1i2	C	T	2: 71,081,323 (GRCm39)	T484I	possibly damaging	Het
Epas1	A	T	17: 87,136,455 (GRCm39)	K742N	probably damaging	Het
Evc2	A	G	5: 37,506,094 (GRCm39)	T138A	probably benign	Het
F5	T	C	1: 164,035,457 (GRCm39)	I1877T	probably damaging	Het
Fat1	T	G	8: 45,406,201 (GRCm39)	V984G	probably benign	Het
Foxn4	C	T	5: 114,394,955 (GRCm39)	R324Q	probably benign	Het
Gapdhs	C	T	7: 30,436,427 (GRCm39)	R120H	probably damaging	Het
Gcnt3	T	C	9: 69,941,659 (GRCm39)	D303G	probably benign	Het
Gng11	A	T	6: 4,008,066 (GRCm39)	Y43F	probably benign	Het
Hectd4	A	C	5: 121,455,308 (GRCm39)	M651L	probably benign	Het
Ifngr2	T	A	16: 91,357,484 (GRCm39)	Y200N	probably benign	Het
Iqgap3	T	C	3: 88,005,708 (GRCm39)	V512A	probably benign	Het
Kdm2a	A	C	19: 4,378,240 (GRCm39)	D187E	probably damaging	Het
Klhl8	A	G	5: 104,019,911 (GRCm39)	V370A	probably damaging	Het
Kmt2a	G	A	9: 44,747,967 (GRCm39)		probably benign	Het
Krt12	C	A	11: 99,311,650 (GRCm39)	V184F	probably benign	Het
Lrrc8c	A	T	5: 105,754,623 (GRCm39)	I133F	probably benign	Het
Lsmem1	GTACATACATACATACATACATACATACA	GTACATACATACATACATACATACATACATACA	12: 40,235,260 (GRCm39)		probably null	Het
Map1a	C	G	2: 121,136,889 (GRCm39)	S2568R	possibly damaging	Het
Mbnl1	C	A	3: 60,532,593 (GRCm39)	Q301K	probably damaging	Het
Med12l	A	T	3: 59,001,038 (GRCm39)	K724N	probably damaging	Het
Mroh2a	A	C	1: 88,169,340 (GRCm39)	I672L	probably benign	Het
Mybph	C	T	1: 134,121,374 (GRCm39)	P45S	probably benign	Het
Myo15a	T	A	11: 60,392,527 (GRCm39)	S2157T	probably damaging	Het
Or14j2	G	T	17: 37,886,164 (GRCm39)	T50K	probably damaging	Het
Or1ab2	T	C	8: 72,863,623 (GRCm39)	V71A	probably benign	Het
Or2t35	T	A	14: 14,407,880 (GRCm38)	Y217*	probably null	Het
Or5h25	T	C	16: 58,930,967 (GRCm39)	E2G	probably benign	Het
Otogl	A	G	10: 107,634,218 (GRCm39)	I1419T	possibly damaging	Het
Ovol1	A	T	19: 5,601,667 (GRCm39)	F118L	probably damaging	Het
Pak5	T	C	2: 135,958,680 (GRCm39)	D136G	probably damaging	Het
Pik3r2	T	C	8: 71,223,250 (GRCm39)	Y417C	probably damaging	Het
Ppp2r2a	T	C	14: 67,254,052 (GRCm39)	N372S	probably benign	Het
Prss30	G	T	17: 24,191,806 (GRCm39)	N238K	possibly damaging	Het
Prss33	C	A	17: 24,053,785 (GRCm39)		probably null	Het
Ptpn4	T	C	1: 119,692,788 (GRCm39)	E187G	probably damaging	Het
Ptprg	A	T	14: 12,207,357 (GRCm38)	N100I	probably damaging	Het
Rbpms2	T	C	9: 65,558,324 (GRCm39)	V130A	probably benign	Het
Rdh7	A	T	10: 127,724,481 (GRCm39)	M1K	probably null	Het
Rtp3	A	C	9: 110,815,751 (GRCm39)	S205A	probably benign	Het
Ryr3	G	T	2: 112,539,618 (GRCm39)	D3207E	probably damaging	Het
Scn9a	T	A	2: 66,313,803 (GRCm39)	T1972S	probably benign	Het
Scnn1b	T	C	7: 121,501,551 (GRCm39)	V122A	probably benign	Het
Slc15a4	A	G	5: 127,686,043 (GRCm39)	L213S	probably damaging	Het
Slc27a5	T	A	7: 12,725,173 (GRCm39)	I425F	probably damaging	Het
Spata31d1b	A	G	13: 59,864,442 (GRCm39)	D530G	probably benign	Het
Tcf25	T	A	8: 124,108,289 (GRCm39)	S115T	probably benign	Het
Tet2	A	G	3: 133,172,613 (GRCm39)	L1883P	possibly damaging	Het
Trim21	T	A	7: 102,211,105 (GRCm39)	R205*	probably null	Het
Ttc23	G	T	7: 67,375,069 (GRCm39)		probably null	Het
Tut7	T	C	13: 59,947,717 (GRCm39)	E466G	possibly damaging	Het
Unc13d	T	C	11: 115,959,499 (GRCm39)	K658R	probably null	Het
Vmn1r43	A	G	6: 89,846,572 (GRCm39)	F305L	possibly damaging	Het
Vmn2r2	A	T	3: 64,024,551 (GRCm39)	C677S	probably benign	Het
Wnt5a	T	C	14: 28,240,300 (GRCm39)	M150T	probably benign	Het
Ythdc1	G	A	5: 86,975,981 (GRCm39)		probably null	Het
Zdbf2	A	T	1: 63,343,408 (GRCm39)	R596*	probably null	Het

Other mutations in Fat4

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00235:Fat4	APN	3	39,036,398 (GRCm39)	missense	probably damaging	1.00
IGL00509:Fat4	APN	3	38,943,188 (GRCm39)	missense	probably damaging	1.00
IGL00698:Fat4	APN	3	39,035,294 (GRCm39)	missense	probably benign	0.17
IGL00934:Fat4	APN	3	38,944,822 (GRCm39)	missense	probably damaging	1.00
IGL01063:Fat4	APN	3	38,944,728 (GRCm39)	missense	possibly damaging	0.80
IGL01123:Fat4	APN	3	39,011,418 (GRCm39)	missense	probably benign	0.00
IGL01313:Fat4	APN	3	39,061,350 (GRCm39)	missense	possibly damaging	0.53
IGL01328:Fat4	APN	3	39,034,807 (GRCm39)	missense	probably damaging	1.00
IGL01328:Fat4	APN	3	38,944,140 (GRCm39)	missense	probably damaging	1.00
IGL01374:Fat4	APN	3	38,941,647 (GRCm39)	missense	probably damaging	1.00
IGL01412:Fat4	APN	3	38,945,330 (GRCm39)	missense	probably benign	0.09
IGL01472:Fat4	APN	3	38,942,219 (GRCm39)	missense	probably damaging	1.00
IGL01514:Fat4	APN	3	39,003,683 (GRCm39)	missense	possibly damaging	0.89
IGL01548:Fat4	APN	3	39,063,406 (GRCm39)	missense	probably damaging	1.00
IGL01548:Fat4	APN	3	38,941,907 (GRCm39)	missense	probably damaging	0.99
IGL01576:Fat4	APN	3	38,943,096 (GRCm39)	missense	probably damaging	1.00
IGL01591:Fat4	APN	3	39,064,524 (GRCm39)	nonsense	probably null
IGL01626:Fat4	APN	3	39,005,181 (GRCm39)	missense	probably damaging	1.00
IGL01746:Fat4	APN	3	39,045,880 (GRCm39)	nonsense	probably null
IGL01800:Fat4	APN	3	39,035,878 (GRCm39)	missense	probably damaging	0.99
IGL01815:Fat4	APN	3	38,942,922 (GRCm39)	missense	probably damaging	1.00
IGL01863:Fat4	APN	3	39,024,768 (GRCm39)	splice site	probably benign
IGL01917:Fat4	APN	3	38,943,879 (GRCm39)	missense	possibly damaging	0.89
IGL01936:Fat4	APN	3	39,033,923 (GRCm39)	missense	probably benign	0.10
IGL02060:Fat4	APN	3	39,064,420 (GRCm39)	missense	probably damaging	1.00
IGL02103:Fat4	APN	3	38,943,348 (GRCm39)	missense	probably damaging	0.97
IGL02119:Fat4	APN	3	39,037,088 (GRCm39)	missense	probably benign	0.10
IGL02124:Fat4	APN	3	38,942,553 (GRCm39)	missense	probably damaging	1.00
IGL02164:Fat4	APN	3	39,050,354 (GRCm39)	critical splice donor site	probably null
IGL02182:Fat4	APN	3	38,944,695 (GRCm39)	missense	probably damaging	1.00
IGL02207:Fat4	APN	3	39,005,412 (GRCm39)	missense	probably benign	0.16
IGL02210:Fat4	APN	3	38,946,002 (GRCm39)	missense	probably benign	0.01
IGL02257:Fat4	APN	3	39,055,288 (GRCm39)	missense	probably benign	0.09
IGL02271:Fat4	APN	3	39,034,068 (GRCm39)	missense	probably benign	0.18
IGL02305:Fat4	APN	3	39,064,137 (GRCm39)	missense	probably damaging	1.00
IGL02314:Fat4	APN	3	38,941,779 (GRCm39)	missense	probably damaging	1.00
IGL02455:Fat4	APN	3	39,005,280 (GRCm39)	missense	possibly damaging	0.48
IGL02468:Fat4	APN	3	39,037,195 (GRCm39)	missense	probably benign
IGL02478:Fat4	APN	3	38,942,364 (GRCm39)	missense	probably damaging	1.00
IGL02480:Fat4	APN	3	39,064,579 (GRCm39)	missense	probably damaging	1.00
IGL02487:Fat4	APN	3	38,941,394 (GRCm39)	missense	probably damaging	1.00
IGL02632:Fat4	APN	3	39,056,913 (GRCm39)	missense	probably benign	0.04
IGL02665:Fat4	APN	3	39,056,985 (GRCm39)	missense	probably benign	0.08
IGL02674:Fat4	APN	3	39,037,486 (GRCm39)	missense	probably benign	0.35
IGL02692:Fat4	APN	3	39,005,235 (GRCm39)	missense	probably damaging	1.00
IGL02710:Fat4	APN	3	38,944,744 (GRCm39)	missense	probably damaging	1.00
IGL02803:Fat4	APN	3	38,943,444 (GRCm39)	missense	probably damaging	1.00
IGL02834:Fat4	APN	3	39,010,893 (GRCm39)	missense	probably damaging	1.00
IGL02891:Fat4	APN	3	39,005,422 (GRCm39)	missense	probably damaging	1.00
IGL02982:Fat4	APN	3	38,944,992 (GRCm39)	missense	probably damaging	1.00
IGL02993:Fat4	APN	3	39,011,304 (GRCm39)	missense	probably damaging	1.00
IGL02996:Fat4	APN	3	39,012,674 (GRCm39)	missense	probably damaging	1.00
IGL03029:Fat4	APN	3	39,036,740 (GRCm39)	missense	possibly damaging	0.46
IGL03124:Fat4	APN	3	39,035,701 (GRCm39)	missense	possibly damaging	0.61
IGL03144:Fat4	APN	3	39,011,008 (GRCm39)	missense	possibly damaging	0.68
IGL03149:Fat4	APN	3	39,045,834 (GRCm39)	missense	probably damaging	1.00
IGL03169:Fat4	APN	3	39,011,547 (GRCm39)	missense	probably benign	0.02
IGL03190:Fat4	APN	3	39,035,390 (GRCm39)	missense	probably damaging	1.00
IGL03272:Fat4	APN	3	39,063,852 (GRCm39)	missense	probably benign
IGL03371:Fat4	APN	3	39,037,336 (GRCm39)	missense	possibly damaging	0.65
IGL03372:Fat4	APN	3	38,943,283 (GRCm39)	missense	possibly damaging	0.88
IGL03388:Fat4	APN	3	39,011,376 (GRCm39)	missense	probably damaging	1.00
IGL03394:Fat4	APN	3	38,946,168 (GRCm39)	missense	probably damaging	0.99
IGL03394:Fat4	APN	3	39,063,513 (GRCm39)	missense	probably damaging	1.00
IGL03405:Fat4	APN	3	39,012,599 (GRCm39)	missense	probably benign	0.02
IGL03410:Fat4	APN	3	38,945,325 (GRCm39)	missense	probably damaging	1.00
Asahi	UTSW	3	39,035,968 (GRCm39)	missense	probably damaging	1.00
Expulsion	UTSW	3	38,943,798 (GRCm39)	missense	probably benign	0.00
heineken	UTSW	3	39,034,529 (GRCm39)	missense	probably damaging	1.00
schlitz	UTSW	3	39,034,808 (GRCm39)	missense	probably damaging	1.00
PIT4696001:Fat4	UTSW	3	39,036,506 (GRCm39)	missense	probably damaging	0.98
PIT4696001:Fat4	UTSW	3	38,943,153 (GRCm39)	missense	probably benign	0.04
R0015:Fat4	UTSW	3	39,036,652 (GRCm39)	missense	probably damaging	1.00
R0015:Fat4	UTSW	3	39,036,652 (GRCm39)	missense	probably damaging	1.00
R0078:Fat4	UTSW	3	38,943,080 (GRCm39)	missense	probably benign	0.35
R0100:Fat4	UTSW	3	39,034,397 (GRCm39)	missense	probably damaging	1.00
R0100:Fat4	UTSW	3	39,034,397 (GRCm39)	missense	probably damaging	1.00
R0201:Fat4	UTSW	3	38,945,745 (GRCm39)	missense	probably damaging	0.99
R0280:Fat4	UTSW	3	38,944,965 (GRCm39)	missense	probably benign
R0357:Fat4	UTSW	3	38,945,376 (GRCm39)	missense	probably damaging	1.00
R0409:Fat4	UTSW	3	39,031,562 (GRCm39)	missense	probably damaging	1.00
R0498:Fat4	UTSW	3	39,034,786 (GRCm39)	missense	probably benign	0.00
R0502:Fat4	UTSW	3	39,057,073 (GRCm39)	missense	probably damaging	0.98
R0506:Fat4	UTSW	3	38,942,463 (GRCm39)	missense	probably benign	0.00
R0532:Fat4	UTSW	3	39,035,870 (GRCm39)	missense	probably benign	0.02
R0616:Fat4	UTSW	3	38,997,019 (GRCm39)	missense	probably damaging	1.00
R0630:Fat4	UTSW	3	39,054,321 (GRCm39)	missense	probably damaging	1.00
R0678:Fat4	UTSW	3	38,943,843 (GRCm39)	missense	probably damaging	1.00
R0685:Fat4	UTSW	3	39,055,327 (GRCm39)	missense	probably benign
R0729:Fat4	UTSW	3	39,054,444 (GRCm39)	splice site	probably benign
R0748:Fat4	UTSW	3	38,941,977 (GRCm39)	missense	possibly damaging	0.67
R0811:Fat4	UTSW	3	39,011,623 (GRCm39)	missense	probably damaging	1.00
R0812:Fat4	UTSW	3	39,011,623 (GRCm39)	missense	probably damaging	1.00
R0830:Fat4	UTSW	3	39,053,258 (GRCm39)	missense	probably benign	0.26
R0841:Fat4	UTSW	3	39,050,147 (GRCm39)	missense	probably damaging	0.99
R0884:Fat4	UTSW	3	39,037,007 (GRCm39)	missense	possibly damaging	0.89
R1056:Fat4	UTSW	3	38,945,541 (GRCm39)	missense	probably damaging	1.00
R1066:Fat4	UTSW	3	39,011,376 (GRCm39)	missense	probably damaging	1.00
R1078:Fat4	UTSW	3	39,037,235 (GRCm39)	missense	probably benign	0.10
R1084:Fat4	UTSW	3	39,033,974 (GRCm39)	missense	possibly damaging	0.88
R1118:Fat4	UTSW	3	39,037,091 (GRCm39)	missense	possibly damaging	0.88
R1213:Fat4	UTSW	3	38,944,520 (GRCm39)	missense	probably benign	0.01
R1418:Fat4	UTSW	3	38,944,962 (GRCm39)	missense	probably damaging	1.00
R1475:Fat4	UTSW	3	38,942,472 (GRCm39)	missense	probably damaging	1.00
R1487:Fat4	UTSW	3	39,050,066 (GRCm39)	missense	possibly damaging	0.77
R1511:Fat4	UTSW	3	39,037,225 (GRCm39)	missense	probably damaging	0.97
R1534:Fat4	UTSW	3	38,944,238 (GRCm39)	missense	probably damaging	1.00
R1558:Fat4	UTSW	3	38,943,135 (GRCm39)	missense	probably damaging	1.00
R1586:Fat4	UTSW	3	38,943,009 (GRCm39)	missense	probably damaging	1.00
R1592:Fat4	UTSW	3	39,061,326 (GRCm39)	missense	probably damaging	0.99
R1655:Fat4	UTSW	3	39,011,467 (GRCm39)	missense	probably damaging	0.97
R1710:Fat4	UTSW	3	39,005,304 (GRCm39)	missense	probably damaging	1.00
R1731:Fat4	UTSW	3	38,945,459 (GRCm39)	missense	probably damaging	1.00
R1761:Fat4	UTSW	3	38,941,638 (GRCm39)	missense	possibly damaging	0.61
R1770:Fat4	UTSW	3	39,064,417 (GRCm39)	missense	probably damaging	1.00
R1828:Fat4	UTSW	3	39,037,607 (GRCm39)	missense	probably damaging	1.00
R1835:Fat4	UTSW	3	39,037,720 (GRCm39)	missense	probably benign	0.00
R1846:Fat4	UTSW	3	39,036,532 (GRCm39)	missense	probably benign	0.00
R1861:Fat4	UTSW	3	39,064,633 (GRCm39)	missense	probably benign	0.09
R1871:Fat4	UTSW	3	39,035,221 (GRCm39)	missense	possibly damaging	0.63
R1981:Fat4	UTSW	3	39,045,813 (GRCm39)	missense	probably damaging	1.00
R1988:Fat4	UTSW	3	39,050,239 (GRCm39)	missense	probably damaging	1.00
R1988:Fat4	UTSW	3	38,941,264 (GRCm39)	missense	probably benign
R2056:Fat4	UTSW	3	38,945,319 (GRCm39)	missense	possibly damaging	0.88
R2058:Fat4	UTSW	3	38,945,319 (GRCm39)	missense	possibly damaging	0.88
R2059:Fat4	UTSW	3	38,945,319 (GRCm39)	missense	possibly damaging	0.88
R2070:Fat4	UTSW	3	39,064,804 (GRCm39)	missense	probably benign	0.00
R2078:Fat4	UTSW	3	38,943,822 (GRCm39)	missense	probably damaging	1.00
R2114:Fat4	UTSW	3	39,035,633 (GRCm39)	missense	probably benign	0.01
R2135:Fat4	UTSW	3	39,034,882 (GRCm39)	missense	probably damaging	0.98
R2152:Fat4	UTSW	3	39,037,544 (GRCm39)	missense	probably damaging	1.00
R2153:Fat4	UTSW	3	39,037,544 (GRCm39)	missense	probably damaging	1.00
R2154:Fat4	UTSW	3	38,941,688 (GRCm39)	missense	probably damaging	1.00
R2196:Fat4	UTSW	3	39,035,566 (GRCm39)	missense	probably benign	0.23
R2211:Fat4	UTSW	3	38,945,676 (GRCm39)	missense	possibly damaging	0.77
R2219:Fat4	UTSW	3	39,064,364 (GRCm39)	missense	probably damaging	1.00
R2247:Fat4	UTSW	3	38,946,198 (GRCm39)	missense	probably damaging	1.00
R2263:Fat4	UTSW	3	38,943,138 (GRCm39)	missense	possibly damaging	0.93
R2264:Fat4	UTSW	3	38,944,571 (GRCm39)	missense	probably benign	0.25
R2274:Fat4	UTSW	3	39,050,048 (GRCm39)	missense	possibly damaging	0.47
R2337:Fat4	UTSW	3	39,034,160 (GRCm39)	missense	probably damaging	1.00
R2343:Fat4	UTSW	3	39,011,254 (GRCm39)	missense	probably damaging	0.97
R2365:Fat4	UTSW	3	39,034,568 (GRCm39)	missense	probably benign
R2412:Fat4	UTSW	3	39,011,221 (GRCm39)	missense	probably benign	0.05
R2883:Fat4	UTSW	3	39,034,953 (GRCm39)	missense	probably damaging	1.00
R2942:Fat4	UTSW	3	39,036,485 (GRCm39)	missense	probably damaging	1.00
R2989:Fat4	UTSW	3	39,061,302 (GRCm39)	missense	probably benign
R3103:Fat4	UTSW	3	38,946,089 (GRCm39)	missense	probably benign	0.03
R3158:Fat4	UTSW	3	38,944,940 (GRCm39)	missense	possibly damaging	0.87
R3800:Fat4	UTSW	3	39,035,423 (GRCm39)	missense	possibly damaging	0.48
R3808:Fat4	UTSW	3	39,036,587 (GRCm39)	missense	possibly damaging	0.52
R3848:Fat4	UTSW	3	39,061,410 (GRCm39)	missense	probably benign	0.10
R3850:Fat4	UTSW	3	39,061,410 (GRCm39)	missense	probably benign	0.10
R3957:Fat4	UTSW	3	39,036,495 (GRCm39)	missense	probably benign
R4065:Fat4	UTSW	3	39,063,346 (GRCm39)	missense	probably benign	0.13
R4078:Fat4	UTSW	3	39,034,169 (GRCm39)	missense	probably damaging	1.00
R4096:Fat4	UTSW	3	38,942,024 (GRCm39)	missense	possibly damaging	0.46
R4161:Fat4	UTSW	3	38,996,958 (GRCm39)	missense	possibly damaging	0.95
R4273:Fat4	UTSW	3	38,945,776 (GRCm39)	missense	probably damaging	1.00
R4285:Fat4	UTSW	3	38,943,320 (GRCm39)	missense	probably benign	0.00
R4288:Fat4	UTSW	3	38,945,912 (GRCm39)	missense	probably damaging	1.00
R4407:Fat4	UTSW	3	39,012,689 (GRCm39)	missense	probably benign	0.05
R4528:Fat4	UTSW	3	38,945,443 (GRCm39)	missense	probably benign	0.01
R4547:Fat4	UTSW	3	39,005,432 (GRCm39)	missense	probably damaging	1.00
R4681:Fat4	UTSW	3	38,941,491 (GRCm39)	missense	probably damaging	1.00
R4826:Fat4	UTSW	3	39,037,106 (GRCm39)	missense	probably damaging	1.00
R4855:Fat4	UTSW	3	38,942,466 (GRCm39)	missense	probably benign
R4871:Fat4	UTSW	3	38,945,754 (GRCm39)	missense	probably damaging	1.00
R4897:Fat4	UTSW	3	39,034,781 (GRCm39)	missense	probably damaging	1.00
R4928:Fat4	UTSW	3	39,064,614 (GRCm39)	missense	probably damaging	1.00
R4932:Fat4	UTSW	3	39,061,352 (GRCm39)	missense	probably benign	0.00
R4941:Fat4	UTSW	3	39,011,601 (GRCm39)	missense	probably damaging	1.00
R4943:Fat4	UTSW	3	39,034,322 (GRCm39)	missense	probably benign	0.19
R4959:Fat4	UTSW	3	39,037,195 (GRCm39)	missense	probably benign	0.00
R4973:Fat4	UTSW	3	39,037,195 (GRCm39)	missense	probably benign	0.00
R5098:Fat4	UTSW	3	38,942,438 (GRCm39)	missense	probably benign	0.34
R5163:Fat4	UTSW	3	39,034,946 (GRCm39)	missense	probably damaging	1.00
R5213:Fat4	UTSW	3	39,034,340 (GRCm39)	missense	possibly damaging	0.56
R5328:Fat4	UTSW	3	39,011,017 (GRCm39)	missense	probably damaging	1.00
R5337:Fat4	UTSW	3	39,064,527 (GRCm39)	missense	probably benign	0.44
R5337:Fat4	UTSW	3	38,945,776 (GRCm39)	missense	probably damaging	1.00
R5363:Fat4	UTSW	3	38,942,154 (GRCm39)	missense	probably damaging	1.00
R5380:Fat4	UTSW	3	38,943,013 (GRCm39)	missense	probably damaging	1.00
R5384:Fat4	UTSW	3	39,050,095 (GRCm39)	missense	possibly damaging	0.87
R5422:Fat4	UTSW	3	38,941,394 (GRCm39)	missense	possibly damaging	0.92
R5436:Fat4	UTSW	3	38,945,495 (GRCm39)	missense	probably benign	0.00
R5443:Fat4	UTSW	3	39,064,519 (GRCm39)	missense	probably damaging	1.00
R5501:Fat4	UTSW	3	38,941,364 (GRCm39)	missense	probably benign	0.09
R5571:Fat4	UTSW	3	39,064,423 (GRCm39)	missense	probably damaging	1.00
R5625:Fat4	UTSW	3	38,943,083 (GRCm39)	missense	possibly damaging	0.78
R5652:Fat4	UTSW	3	39,057,117 (GRCm39)	missense	probably damaging	0.99
R5725:Fat4	UTSW	3	38,943,774 (GRCm39)	missense	probably damaging	1.00
R5735:Fat4	UTSW	3	39,003,725 (GRCm39)	missense	probably damaging	1.00
R5739:Fat4	UTSW	3	39,037,283 (GRCm39)	missense	probably benign	0.01
R5766:Fat4	UTSW	3	38,943,617 (GRCm39)	missense	probably damaging	1.00
R5780:Fat4	UTSW	3	39,035,104 (GRCm39)	missense	probably damaging	0.96
R5811:Fat4	UTSW	3	38,945,936 (GRCm39)	missense	probably damaging	1.00
R5829:Fat4	UTSW	3	39,061,454 (GRCm39)	missense	probably damaging	1.00
R5879:Fat4	UTSW	3	38,941,485 (GRCm39)	missense	probably benign
R5933:Fat4	UTSW	3	39,005,524 (GRCm39)	critical splice donor site	probably null
R5938:Fat4	UTSW	3	39,005,388 (GRCm39)	missense	probably damaging	1.00
R5940:Fat4	UTSW	3	38,943,798 (GRCm39)	missense	probably benign	0.00
R5945:Fat4	UTSW	3	39,037,355 (GRCm39)	missense	probably benign	0.19
R5963:Fat4	UTSW	3	39,064,696 (GRCm39)	missense	probably damaging	1.00
R6077:Fat4	UTSW	3	39,056,951 (GRCm39)	missense	probably damaging	1.00
R6158:Fat4	UTSW	3	39,037,411 (GRCm39)	missense	possibly damaging	0.95
R6246:Fat4	UTSW	3	38,945,870 (GRCm39)	missense	probably damaging	1.00
R6253:Fat4	UTSW	3	39,005,505 (GRCm39)	missense	probably damaging	0.99
R6259:Fat4	UTSW	3	39,061,395 (GRCm39)	missense	probably benign	0.18
R6295:Fat4	UTSW	3	39,061,229 (GRCm39)	splice site	probably null
R6387:Fat4	UTSW	3	39,037,934 (GRCm39)	missense	probably damaging	1.00
R6390:Fat4	UTSW	3	39,034,529 (GRCm39)	missense	probably damaging	1.00
R6456:Fat4	UTSW	3	39,038,128 (GRCm39)	missense	possibly damaging	0.90
R6493:Fat4	UTSW	3	38,945,036 (GRCm39)	missense	probably damaging	1.00
R6500:Fat4	UTSW	3	39,035,418 (GRCm39)	nonsense	probably null
R6503:Fat4	UTSW	3	39,036,406 (GRCm39)	missense	probably benign	0.00
R6519:Fat4	UTSW	3	39,057,020 (GRCm39)	missense	probably benign
R6566:Fat4	UTSW	3	39,011,275 (GRCm39)	missense	possibly damaging	0.78
R6576:Fat4	UTSW	3	39,033,839 (GRCm39)	missense	probably benign
R6590:Fat4	UTSW	3	39,037,688 (GRCm39)	missense	probably damaging	1.00
R6658:Fat4	UTSW	3	38,997,077 (GRCm39)	missense	probably benign	0.01
R6662:Fat4	UTSW	3	39,010,970 (GRCm39)	missense	possibly damaging	0.95
R6690:Fat4	UTSW	3	39,037,688 (GRCm39)	missense	probably damaging	1.00
R6807:Fat4	UTSW	3	39,036,589 (GRCm39)	missense	probably benign	0.18
R6823:Fat4	UTSW	3	39,038,088 (GRCm39)	missense	probably benign	0.05
R6824:Fat4	UTSW	3	39,011,674 (GRCm39)	missense	probably benign	0.00
R6830:Fat4	UTSW	3	39,035,966 (GRCm39)	missense	probably benign	0.00
R6925:Fat4	UTSW	3	39,050,353 (GRCm39)	critical splice donor site	probably null
R6948:Fat4	UTSW	3	39,063,595 (GRCm39)	missense	probably damaging	1.00
R6970:Fat4	UTSW	3	39,050,120 (GRCm39)	missense	probably damaging	1.00
R6970:Fat4	UTSW	3	39,035,924 (GRCm39)	missense	probably damaging	1.00
R7017:Fat4	UTSW	3	38,945,692 (GRCm39)	missense	probably benign
R7030:Fat4	UTSW	3	39,036,107 (GRCm39)	missense	probably damaging	1.00
R7044:Fat4	UTSW	3	39,064,960 (GRCm39)	missense	probably benign	0.02
R7044:Fat4	UTSW	3	39,064,959 (GRCm39)	missense	probably benign
R7045:Fat4	UTSW	3	38,942,750 (GRCm39)	missense	probably benign	0.01
R7094:Fat4	UTSW	3	38,944,023 (GRCm39)	missense	probably damaging	1.00
R7111:Fat4	UTSW	3	39,064,682 (GRCm39)	missense	probably damaging	1.00
R7130:Fat4	UTSW	3	39,034,936 (GRCm39)	missense	probably damaging	0.99
R7168:Fat4	UTSW	3	39,034,808 (GRCm39)	missense	probably damaging	1.00
R7192:Fat4	UTSW	3	39,034,613 (GRCm39)	missense	probably benign	0.04
R7194:Fat4	UTSW	3	39,038,044 (GRCm39)	missense	probably damaging	1.00
R7194:Fat4	UTSW	3	38,943,033 (GRCm39)	missense	probably damaging	1.00
R7199:Fat4	UTSW	3	39,031,511 (GRCm39)	missense	probably damaging	0.98
R7213:Fat4	UTSW	3	39,053,236 (GRCm39)	missense	possibly damaging	0.63
R7216:Fat4	UTSW	3	38,945,192 (GRCm39)	missense	probably damaging	1.00
R7225:Fat4	UTSW	3	39,034,325 (GRCm39)	missense	possibly damaging	0.50
R7238:Fat4	UTSW	3	38,944,562 (GRCm39)	missense	probably benign	0.31
R7239:Fat4	UTSW	3	39,037,989 (GRCm39)	missense	possibly damaging	0.85
R7283:Fat4	UTSW	3	38,943,842 (GRCm39)	missense	probably damaging	1.00
R7296:Fat4	UTSW	3	38,943,294 (GRCm39)	nonsense	probably null
R7372:Fat4	UTSW	3	38,944,358 (GRCm39)	missense	probably damaging	1.00
R7400:Fat4	UTSW	3	38,942,073 (GRCm39)	missense	probably damaging	1.00
R7419:Fat4	UTSW	3	39,054,385 (GRCm39)	missense	probably damaging	1.00
R7430:Fat4	UTSW	3	39,063,793 (GRCm39)	missense	probably damaging	1.00
R7430:Fat4	UTSW	3	38,941,599 (GRCm39)	missense	probably damaging	0.97
R7431:Fat4	UTSW	3	39,063,306 (GRCm39)	missense	possibly damaging	0.80
R7486:Fat4	UTSW	3	39,011,576 (GRCm39)	nonsense	probably null
R7501:Fat4	UTSW	3	39,012,597 (GRCm39)	nonsense	probably null
R7533:Fat4	UTSW	3	39,061,406 (GRCm39)	missense	probably benign	0.43
R7542:Fat4	UTSW	3	39,035,770 (GRCm39)	missense	possibly damaging	0.64
R7542:Fat4	UTSW	3	39,035,504 (GRCm39)	missense	possibly damaging	0.56
R7548:Fat4	UTSW	3	39,035,263 (GRCm39)	missense	probably benign	0.13
R7567:Fat4	UTSW	3	38,943,485 (GRCm39)	missense	probably damaging	1.00
R7644:Fat4	UTSW	3	39,064,390 (GRCm39)	missense	possibly damaging	0.64
R7660:Fat4	UTSW	3	39,035,309 (GRCm39)	missense	probably benign
R7665:Fat4	UTSW	3	38,943,327 (GRCm39)	missense	probably benign	0.00
R7676:Fat4	UTSW	3	38,945,846 (GRCm39)	missense	probably damaging	0.98
R7832:Fat4	UTSW	3	39,055,353 (GRCm39)	missense	probably benign	0.00
R7848:Fat4	UTSW	3	38,942,000 (GRCm39)	missense	probably benign
R7883:Fat4	UTSW	3	39,035,968 (GRCm39)	missense	probably damaging	1.00
R7892:Fat4	UTSW	3	39,003,588 (GRCm39)	critical splice acceptor site	probably null
R7904:Fat4	UTSW	3	38,941,690 (GRCm39)	missense	probably damaging	1.00
R7952:Fat4	UTSW	3	38,945,870 (GRCm39)	missense	probably damaging	0.98
R8015:Fat4	UTSW	3	39,036,065 (GRCm39)	missense	possibly damaging	0.79
R8040:Fat4	UTSW	3	39,035,815 (GRCm39)	missense	probably damaging	1.00
R8142:Fat4	UTSW	3	38,945,352 (GRCm39)	missense	probably damaging	1.00
R8151:Fat4	UTSW	3	38,946,203 (GRCm39)	missense	probably damaging	0.99
R8163:Fat4	UTSW	3	39,033,881 (GRCm39)	missense	possibly damaging	0.88
R8317:Fat4	UTSW	3	39,012,659 (GRCm39)	missense	possibly damaging	0.80
R8413:Fat4	UTSW	3	39,063,128 (GRCm39)	critical splice acceptor site	probably null
R8447:Fat4	UTSW	3	39,033,824 (GRCm39)	missense	possibly damaging	0.88
R8458:Fat4	UTSW	3	39,035,702 (GRCm39)	missense	probably benign	0.25
R8509:Fat4	UTSW	3	39,036,052 (GRCm39)	missense	probably benign
R8543:Fat4	UTSW	3	39,031,643 (GRCm39)	missense	probably damaging	1.00
R8679:Fat4	UTSW	3	39,064,842 (GRCm39)	missense	probably damaging	1.00
R8726:Fat4	UTSW	3	39,064,647 (GRCm39)	missense	probably damaging	1.00
R8743:Fat4	UTSW	3	38,942,592 (GRCm39)	missense	probably benign	0.16
R8751:Fat4	UTSW	3	38,946,002 (GRCm39)	missense	probably benign	0.01
R8779:Fat4	UTSW	3	39,033,898 (GRCm39)	missense	probably damaging	1.00
R8797:Fat4	UTSW	3	39,053,278 (GRCm39)	missense	probably benign	0.01
R8860:Fat4	UTSW	3	38,946,269 (GRCm39)	missense	probably benign	0.26
R8955:Fat4	UTSW	3	39,037,778 (GRCm39)	missense	probably benign	0.01
R9053:Fat4	UTSW	3	38,941,324 (GRCm39)	nonsense	probably null
R9071:Fat4	UTSW	3	39,037,598 (GRCm39)	missense	probably benign	0.29
R9088:Fat4	UTSW	3	39,061,448 (GRCm39)	missense	probably benign	0.02
R9100:Fat4	UTSW	3	39,064,803 (GRCm39)	missense
R9180:Fat4	UTSW	3	38,942,556 (GRCm39)	missense	possibly damaging	0.78
R9184:Fat4	UTSW	3	39,036,592 (GRCm39)	missense	probably damaging	0.99
R9201:Fat4	UTSW	3	38,945,079 (GRCm39)	missense	probably damaging	1.00
R9206:Fat4	UTSW	3	39,063,390 (GRCm39)	missense	probably damaging	0.99
R9268:Fat4	UTSW	3	38,942,396 (GRCm39)	missense	probably damaging	1.00
R9278:Fat4	UTSW	3	38,945,171 (GRCm39)	missense	probably benign	0.44
R9287:Fat4	UTSW	3	38,945,781 (GRCm39)	missense	probably damaging	0.98
R9355:Fat4	UTSW	3	39,036,047 (GRCm39)	missense	probably damaging	1.00
R9437:Fat4	UTSW	3	38,945,417 (GRCm39)	missense	probably benign	0.00
R9455:Fat4	UTSW	3	38,945,412 (GRCm39)	missense
R9456:Fat4	UTSW	3	38,942,571 (GRCm39)	missense	possibly damaging	0.50
R9476:Fat4	UTSW	3	39,037,886 (GRCm39)	missense	probably benign	0.04
R9510:Fat4	UTSW	3	39,037,886 (GRCm39)	missense	probably benign	0.04
R9511:Fat4	UTSW	3	39,034,802 (GRCm39)	missense	probably damaging	0.98
R9540:Fat4	UTSW	3	39,063,346 (GRCm39)	missense	probably benign
R9568:Fat4	UTSW	3	38,946,156 (GRCm39)	missense	probably damaging	1.00
R9646:Fat4	UTSW	3	39,035,813 (GRCm39)	missense	probably damaging	1.00
R9683:Fat4	UTSW	3	38,943,332 (GRCm39)	missense	possibly damaging	0.52
R9711:Fat4	UTSW	3	39,055,374 (GRCm39)	missense	probably benign	0.00
X0017:Fat4	UTSW	3	39,063,255 (GRCm39)	missense	probably benign	0.00
X0019:Fat4	UTSW	3	39,035,189 (GRCm39)	missense	probably damaging	1.00
X0020:Fat4	UTSW	3	39,054,300 (GRCm39)	missense	probably damaging	1.00
X0024:Fat4	UTSW	3	38,997,051 (GRCm39)	missense	probably benign	0.43
X0064:Fat4	UTSW	3	39,024,901 (GRCm39)	missense	probably damaging	1.00
Z1088:Fat4	UTSW	3	39,012,641 (GRCm39)	missense	probably benign	0.00
Z1088:Fat4	UTSW	3	38,941,199 (GRCm39)	missense	possibly damaging	0.88
Z1176:Fat4	UTSW	3	39,037,964 (GRCm39)	missense	probably damaging	1.00
Z1176:Fat4	UTSW	3	39,037,508 (GRCm39)	missense	probably benign	0.00
Z1177:Fat4	UTSW	3	38,944,496 (GRCm39)	missense	probably damaging	1.00
Z1177:Fat4	UTSW	3	38,942,733 (GRCm39)	missense	probably damaging	1.00
Z1177:Fat4	UTSW	3	39,035,987 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- CCTTCTCAGAGCACCTCCGTAAAAG -3'
(R):5'- TGTTGAAAATCTCTCCAGTGGTGGC -3'

Sequencing Primer
(F):5'- TGGGATACACAGTTACCCGTG -3'
(R):5'- TCTGAAATACTCTGACTGCGAC -3'

Posted On

2014-05-09