Incidental Mutation 'R1655:Ncoa7'
ID |
189039 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Ncoa7
|
Ensembl Gene |
ENSMUSG00000039697 |
Gene Name |
nuclear receptor coactivator 7 |
Synonyms |
9030406N13Rik |
MMRRC Submission |
039691-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R1655 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
10 |
Chromosomal Location |
30521578-30683401 bp(-) (GRCm39) |
Type of Mutation |
critical splice acceptor site |
DNA Base Change (assembly) |
T to C
at 30574241 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Ref Sequence |
ENSEMBL: ENSMUSP00000149335
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000068567]
[ENSMUST00000068567]
[ENSMUST00000068567]
[ENSMUST00000068567]
[ENSMUST00000068567]
[ENSMUST00000068567]
[ENSMUST00000213836]
[ENSMUST00000213836]
[ENSMUST00000213836]
[ENSMUST00000215725]
[ENSMUST00000215725]
[ENSMUST00000215725]
[ENSMUST00000215740]
[ENSMUST00000215740]
[ENSMUST00000215740]
[ENSMUST00000215926]
|
AlphaFold |
Q6DFV7 |
Predicted Effect |
probably null
Transcript: ENSMUST00000068567
|
SMART Domains |
Protein: ENSMUSP00000066741 Gene: ENSMUSG00000039697
Domain | Start | End | E-Value | Type |
coiled coil region
|
1 |
32 |
N/A |
INTRINSIC |
LysM
|
118 |
161 |
2.24e-7 |
SMART |
low complexity region
|
165 |
176 |
N/A |
INTRINSIC |
TLDc
|
781 |
943 |
2.86e-64 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000068567
|
SMART Domains |
Protein: ENSMUSP00000066741 Gene: ENSMUSG00000039697
Domain | Start | End | E-Value | Type |
coiled coil region
|
1 |
32 |
N/A |
INTRINSIC |
LysM
|
118 |
161 |
2.24e-7 |
SMART |
low complexity region
|
165 |
176 |
N/A |
INTRINSIC |
TLDc
|
781 |
943 |
2.86e-64 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000068567
|
SMART Domains |
Protein: ENSMUSP00000066741 Gene: ENSMUSG00000039697
Domain | Start | End | E-Value | Type |
coiled coil region
|
1 |
32 |
N/A |
INTRINSIC |
LysM
|
118 |
161 |
2.24e-7 |
SMART |
low complexity region
|
165 |
176 |
N/A |
INTRINSIC |
TLDc
|
781 |
943 |
2.86e-64 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000068567
|
SMART Domains |
Protein: ENSMUSP00000066741 Gene: ENSMUSG00000039697
Domain | Start | End | E-Value | Type |
coiled coil region
|
1 |
32 |
N/A |
INTRINSIC |
LysM
|
118 |
161 |
2.24e-7 |
SMART |
low complexity region
|
165 |
176 |
N/A |
INTRINSIC |
TLDc
|
781 |
943 |
2.86e-64 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000068567
|
SMART Domains |
Protein: ENSMUSP00000066741 Gene: ENSMUSG00000039697
Domain | Start | End | E-Value | Type |
coiled coil region
|
1 |
32 |
N/A |
INTRINSIC |
LysM
|
118 |
161 |
2.24e-7 |
SMART |
low complexity region
|
165 |
176 |
N/A |
INTRINSIC |
TLDc
|
781 |
943 |
2.86e-64 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000068567
|
SMART Domains |
Protein: ENSMUSP00000066741 Gene: ENSMUSG00000039697
Domain | Start | End | E-Value | Type |
coiled coil region
|
1 |
32 |
N/A |
INTRINSIC |
LysM
|
118 |
161 |
2.24e-7 |
SMART |
low complexity region
|
165 |
176 |
N/A |
INTRINSIC |
TLDc
|
781 |
943 |
2.86e-64 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000213836
|
Predicted Effect |
probably null
Transcript: ENSMUST00000213836
|
Predicted Effect |
probably null
Transcript: ENSMUST00000213836
|
Predicted Effect |
probably null
Transcript: ENSMUST00000215725
|
Predicted Effect |
probably null
Transcript: ENSMUST00000215725
|
Predicted Effect |
probably null
Transcript: ENSMUST00000215725
|
Predicted Effect |
probably null
Transcript: ENSMUST00000215740
|
Predicted Effect |
probably null
Transcript: ENSMUST00000215740
|
Predicted Effect |
probably null
Transcript: ENSMUST00000215740
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000215926
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000217398
|
Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.3%
- 10x: 96.0%
- 20x: 91.3%
|
Validation Efficiency |
|
Allele List at MGI |
All alleles(108) : Gene trapped(108) |
Other mutations in this stock |
Total: 73 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
A730061H03Rik |
A |
T |
14: 55,797,790 (GRCm39) |
|
probably benign |
Het |
Abca1 |
C |
T |
4: 53,050,964 (GRCm39) |
A1582T |
probably benign |
Het |
Acot8 |
A |
T |
2: 164,645,028 (GRCm39) |
S52T |
probably benign |
Het |
Atcay |
C |
T |
10: 81,049,231 (GRCm39) |
V124M |
probably damaging |
Het |
Cep295 |
C |
T |
9: 15,252,179 (GRCm39) |
E397K |
probably damaging |
Het |
Cfap46 |
A |
T |
7: 139,222,436 (GRCm39) |
Y1180* |
probably null |
Het |
Clptm1 |
T |
A |
7: 19,379,792 (GRCm39) |
H148L |
probably benign |
Het |
Clstn3 |
A |
G |
6: 124,414,386 (GRCm39) |
L743P |
probably damaging |
Het |
Crtc3 |
A |
T |
7: 80,248,524 (GRCm39) |
M313K |
possibly damaging |
Het |
Csgalnact1 |
T |
A |
8: 68,826,341 (GRCm39) |
I326F |
possibly damaging |
Het |
Dennd6b |
G |
T |
15: 89,080,543 (GRCm39) |
T19K |
unknown |
Het |
Disp1 |
A |
T |
1: 182,868,568 (GRCm39) |
I1284N |
probably benign |
Het |
Dnah2 |
A |
G |
11: 69,364,680 (GRCm39) |
Y1992H |
probably damaging |
Het |
Dnah6 |
C |
T |
6: 73,182,715 (GRCm39) |
V205I |
possibly damaging |
Het |
Dst |
G |
T |
1: 34,321,657 (GRCm39) |
G4391* |
probably null |
Het |
Dytn |
A |
G |
1: 63,700,357 (GRCm39) |
S258P |
probably damaging |
Het |
Emilin3 |
T |
A |
2: 160,752,786 (GRCm39) |
|
probably null |
Het |
Ermn |
C |
T |
2: 57,942,596 (GRCm39) |
V45I |
probably benign |
Het |
Fat4 |
T |
C |
3: 39,011,467 (GRCm39) |
V2189A |
probably damaging |
Het |
Fcgbpl1 |
A |
T |
7: 27,846,535 (GRCm39) |
N1076Y |
probably damaging |
Het |
Filip1l |
T |
C |
16: 57,392,214 (GRCm39) |
I934T |
probably damaging |
Het |
Gbp9 |
T |
A |
5: 105,229,558 (GRCm39) |
Q472L |
possibly damaging |
Het |
Gimap5 |
G |
T |
6: 48,730,110 (GRCm39) |
E227* |
probably null |
Het |
Gsdmc |
C |
T |
15: 63,651,892 (GRCm39) |
V240M |
probably benign |
Het |
H2-Q4 |
G |
T |
17: 35,601,881 (GRCm39) |
V248F |
probably damaging |
Het |
Helz2 |
T |
C |
2: 180,875,940 (GRCm39) |
E1518G |
probably damaging |
Het |
Hmcn1 |
A |
G |
1: 150,506,084 (GRCm39) |
V3814A |
probably benign |
Het |
Hoatz |
A |
T |
9: 50,994,921 (GRCm39) |
I136N |
probably damaging |
Het |
Ifna7 |
A |
G |
4: 88,734,897 (GRCm39) |
T145A |
probably benign |
Het |
Itgam |
T |
A |
7: 127,714,335 (GRCm39) |
M947K |
probably benign |
Het |
Itpr2 |
T |
G |
6: 146,277,646 (GRCm39) |
N608H |
probably damaging |
Het |
Klra2 |
T |
A |
6: 131,197,174 (GRCm39) |
N242I |
probably damaging |
Het |
Lonrf2 |
A |
T |
1: 38,850,905 (GRCm39) |
L219Q |
probably damaging |
Het |
Ly6c2 |
T |
C |
15: 74,980,412 (GRCm39) |
I126V |
probably benign |
Het |
Mr1 |
G |
A |
1: 155,008,201 (GRCm39) |
T258M |
probably benign |
Het |
Mrps35 |
T |
G |
6: 146,961,726 (GRCm39) |
D200E |
possibly damaging |
Het |
Nbeal2 |
A |
C |
9: 110,461,940 (GRCm39) |
S1506A |
probably damaging |
Het |
Nlrp4a |
A |
T |
7: 26,149,076 (GRCm39) |
I228F |
possibly damaging |
Het |
Or13p5 |
A |
G |
4: 118,592,196 (GRCm39) |
S157G |
probably benign |
Het |
Or5c1 |
A |
G |
2: 37,221,951 (GRCm39) |
Y64C |
probably damaging |
Het |
Or5p59 |
A |
T |
7: 107,702,671 (GRCm39) |
I52F |
probably damaging |
Het |
Or8k3 |
A |
G |
2: 86,058,424 (GRCm39) |
V297A |
possibly damaging |
Het |
Paxx |
T |
C |
2: 25,350,328 (GRCm39) |
E93G |
probably damaging |
Het |
Per2 |
C |
A |
1: 91,376,490 (GRCm39) |
G128W |
probably damaging |
Het |
Piezo1 |
A |
G |
8: 123,223,561 (GRCm39) |
I796T |
probably benign |
Het |
Pkhd1 |
A |
G |
1: 20,654,353 (GRCm39) |
S235P |
probably damaging |
Het |
Pole |
T |
A |
5: 110,483,788 (GRCm39) |
F259Y |
probably damaging |
Het |
Pus7 |
T |
A |
5: 23,952,798 (GRCm39) |
K512* |
probably null |
Het |
Ralyl |
A |
T |
3: 14,172,296 (GRCm39) |
Y55F |
probably damaging |
Het |
Rgs14 |
T |
A |
13: 55,531,347 (GRCm39) |
M451K |
probably benign |
Het |
Rhag |
T |
C |
17: 41,142,487 (GRCm39) |
F231L |
probably damaging |
Het |
Ric8a |
T |
C |
7: 140,440,808 (GRCm39) |
C94R |
probably benign |
Het |
Rictor |
T |
A |
15: 6,801,693 (GRCm39) |
D460E |
probably benign |
Het |
Rpn1 |
T |
C |
6: 88,077,926 (GRCm39) |
V454A |
possibly damaging |
Het |
Sacs |
A |
G |
14: 61,429,231 (GRCm39) |
D427G |
probably benign |
Het |
Scai |
A |
T |
2: 38,970,129 (GRCm39) |
V545D |
possibly damaging |
Het |
Serpinb3a |
A |
G |
1: 106,973,942 (GRCm39) |
V323A |
probably damaging |
Het |
Slc13a5 |
C |
A |
11: 72,148,204 (GRCm39) |
C277F |
probably benign |
Het |
Slc15a1 |
A |
T |
14: 121,703,311 (GRCm39) |
Y557N |
probably benign |
Het |
Slc34a2 |
T |
C |
5: 53,226,761 (GRCm39) |
V628A |
probably benign |
Het |
Slc8a2 |
G |
T |
7: 15,875,060 (GRCm39) |
G436V |
probably damaging |
Het |
Sphkap |
G |
A |
1: 83,255,236 (GRCm39) |
R838* |
probably null |
Het |
Supt5 |
T |
C |
7: 28,029,449 (GRCm39) |
I103V |
probably benign |
Het |
Tdrd1 |
T |
A |
19: 56,831,648 (GRCm39) |
Y346* |
probably null |
Het |
Tg |
T |
G |
15: 66,700,417 (GRCm39) |
|
probably null |
Het |
Top1 |
T |
A |
2: 160,545,616 (GRCm39) |
|
probably null |
Het |
Trmt12 |
T |
C |
15: 58,745,076 (GRCm39) |
L158P |
probably damaging |
Het |
Tssk4 |
A |
G |
14: 55,889,152 (GRCm39) |
N226S |
probably damaging |
Het |
Unc80 |
G |
T |
1: 66,711,915 (GRCm39) |
V2746F |
possibly damaging |
Het |
Usp34 |
T |
A |
11: 23,325,051 (GRCm39) |
V999E |
probably benign |
Het |
Virma |
T |
C |
4: 11,494,786 (GRCm39) |
V29A |
probably damaging |
Het |
Zfp40 |
A |
T |
17: 23,396,240 (GRCm39) |
Y48N |
probably benign |
Het |
Zfp609 |
A |
G |
9: 65,610,836 (GRCm39) |
V709A |
possibly damaging |
Het |
|
Other mutations in Ncoa7 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01406:Ncoa7
|
APN |
10 |
30,566,836 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01716:Ncoa7
|
APN |
10 |
30,538,330 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL02114:Ncoa7
|
APN |
10 |
30,538,360 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02170:Ncoa7
|
APN |
10 |
30,565,849 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL02436:Ncoa7
|
APN |
10 |
30,570,143 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02499:Ncoa7
|
APN |
10 |
30,566,885 (GRCm39) |
missense |
probably benign |
0.04 |
IGL02533:Ncoa7
|
APN |
10 |
30,598,781 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02533:Ncoa7
|
APN |
10 |
30,566,895 (GRCm39) |
missense |
possibly damaging |
0.87 |
IGL02590:Ncoa7
|
APN |
10 |
30,570,159 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02657:Ncoa7
|
APN |
10 |
30,528,972 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03065:Ncoa7
|
APN |
10 |
30,523,993 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03088:Ncoa7
|
APN |
10 |
30,574,121 (GRCm39) |
splice site |
probably null |
|
IGL03090:Ncoa7
|
APN |
10 |
30,538,396 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL03196:Ncoa7
|
APN |
10 |
30,523,510 (GRCm39) |
utr 3 prime |
probably benign |
|
D6062:Ncoa7
|
UTSW |
10 |
30,598,651 (GRCm39) |
missense |
probably damaging |
1.00 |
R0058:Ncoa7
|
UTSW |
10 |
30,523,537 (GRCm39) |
missense |
probably damaging |
1.00 |
R0058:Ncoa7
|
UTSW |
10 |
30,523,537 (GRCm39) |
missense |
probably damaging |
1.00 |
R0578:Ncoa7
|
UTSW |
10 |
30,577,913 (GRCm39) |
critical splice donor site |
probably null |
|
R0729:Ncoa7
|
UTSW |
10 |
30,567,575 (GRCm39) |
missense |
probably benign |
0.00 |
R1538:Ncoa7
|
UTSW |
10 |
30,570,207 (GRCm39) |
missense |
probably damaging |
0.99 |
R1539:Ncoa7
|
UTSW |
10 |
30,647,725 (GRCm39) |
missense |
probably damaging |
1.00 |
R1574:Ncoa7
|
UTSW |
10 |
30,570,097 (GRCm39) |
missense |
probably damaging |
1.00 |
R1574:Ncoa7
|
UTSW |
10 |
30,570,097 (GRCm39) |
missense |
probably damaging |
1.00 |
R1624:Ncoa7
|
UTSW |
10 |
30,580,655 (GRCm39) |
missense |
possibly damaging |
0.87 |
R1639:Ncoa7
|
UTSW |
10 |
30,577,988 (GRCm39) |
missense |
probably damaging |
1.00 |
R1876:Ncoa7
|
UTSW |
10 |
30,574,122 (GRCm39) |
intron |
probably benign |
|
R1885:Ncoa7
|
UTSW |
10 |
30,524,448 (GRCm39) |
missense |
possibly damaging |
0.81 |
R1886:Ncoa7
|
UTSW |
10 |
30,524,448 (GRCm39) |
missense |
possibly damaging |
0.81 |
R1887:Ncoa7
|
UTSW |
10 |
30,524,448 (GRCm39) |
missense |
possibly damaging |
0.81 |
R1909:Ncoa7
|
UTSW |
10 |
30,565,796 (GRCm39) |
missense |
probably damaging |
1.00 |
R1938:Ncoa7
|
UTSW |
10 |
30,574,166 (GRCm39) |
missense |
probably benign |
0.02 |
R1965:Ncoa7
|
UTSW |
10 |
30,530,426 (GRCm39) |
nonsense |
probably null |
|
R1978:Ncoa7
|
UTSW |
10 |
30,567,295 (GRCm39) |
missense |
probably benign |
|
R2303:Ncoa7
|
UTSW |
10 |
30,530,431 (GRCm39) |
missense |
probably damaging |
1.00 |
R3777:Ncoa7
|
UTSW |
10 |
30,565,752 (GRCm39) |
missense |
probably damaging |
1.00 |
R3778:Ncoa7
|
UTSW |
10 |
30,565,752 (GRCm39) |
missense |
probably damaging |
1.00 |
R4026:Ncoa7
|
UTSW |
10 |
30,598,720 (GRCm39) |
missense |
probably benign |
0.02 |
R4230:Ncoa7
|
UTSW |
10 |
30,574,253 (GRCm39) |
splice site |
probably null |
|
R4667:Ncoa7
|
UTSW |
10 |
30,566,786 (GRCm39) |
missense |
probably damaging |
1.00 |
R4786:Ncoa7
|
UTSW |
10 |
30,531,638 (GRCm39) |
missense |
probably benign |
0.28 |
R4809:Ncoa7
|
UTSW |
10 |
30,647,758 (GRCm39) |
missense |
possibly damaging |
0.92 |
R4820:Ncoa7
|
UTSW |
10 |
30,524,472 (GRCm39) |
missense |
probably damaging |
1.00 |
R4839:Ncoa7
|
UTSW |
10 |
30,598,655 (GRCm39) |
missense |
possibly damaging |
0.93 |
R4861:Ncoa7
|
UTSW |
10 |
30,580,608 (GRCm39) |
missense |
probably benign |
|
R4861:Ncoa7
|
UTSW |
10 |
30,580,608 (GRCm39) |
missense |
probably benign |
|
R5271:Ncoa7
|
UTSW |
10 |
30,598,725 (GRCm39) |
missense |
probably benign |
0.02 |
R5384:Ncoa7
|
UTSW |
10 |
30,598,813 (GRCm39) |
missense |
probably benign |
0.00 |
R5418:Ncoa7
|
UTSW |
10 |
30,524,035 (GRCm39) |
missense |
probably damaging |
1.00 |
R5964:Ncoa7
|
UTSW |
10 |
30,580,632 (GRCm39) |
missense |
probably damaging |
1.00 |
R6257:Ncoa7
|
UTSW |
10 |
30,570,173 (GRCm39) |
missense |
probably damaging |
1.00 |
R6683:Ncoa7
|
UTSW |
10 |
30,647,717 (GRCm39) |
missense |
probably damaging |
0.99 |
R6813:Ncoa7
|
UTSW |
10 |
30,572,188 (GRCm39) |
missense |
probably damaging |
1.00 |
R6910:Ncoa7
|
UTSW |
10 |
30,570,117 (GRCm39) |
missense |
possibly damaging |
0.89 |
R7123:Ncoa7
|
UTSW |
10 |
30,530,435 (GRCm39) |
missense |
probably benign |
0.28 |
R7327:Ncoa7
|
UTSW |
10 |
30,565,796 (GRCm39) |
missense |
probably damaging |
1.00 |
R7412:Ncoa7
|
UTSW |
10 |
30,598,847 (GRCm39) |
missense |
possibly damaging |
0.94 |
R7638:Ncoa7
|
UTSW |
10 |
30,598,794 (GRCm39) |
missense |
probably benign |
0.35 |
R7653:Ncoa7
|
UTSW |
10 |
30,570,239 (GRCm39) |
missense |
probably damaging |
1.00 |
R7848:Ncoa7
|
UTSW |
10 |
30,524,414 (GRCm39) |
missense |
possibly damaging |
0.82 |
R7861:Ncoa7
|
UTSW |
10 |
30,567,056 (GRCm39) |
missense |
probably benign |
0.38 |
R8125:Ncoa7
|
UTSW |
10 |
30,570,087 (GRCm39) |
missense |
possibly damaging |
0.80 |
R8198:Ncoa7
|
UTSW |
10 |
30,580,664 (GRCm39) |
missense |
probably benign |
0.00 |
R8240:Ncoa7
|
UTSW |
10 |
30,567,725 (GRCm39) |
missense |
probably benign |
0.45 |
R8353:Ncoa7
|
UTSW |
10 |
30,570,155 (GRCm39) |
missense |
probably damaging |
1.00 |
R8509:Ncoa7
|
UTSW |
10 |
30,572,048 (GRCm39) |
missense |
probably benign |
0.00 |
R8861:Ncoa7
|
UTSW |
10 |
30,567,364 (GRCm39) |
missense |
probably benign |
0.02 |
R9040:Ncoa7
|
UTSW |
10 |
30,530,389 (GRCm39) |
missense |
probably benign |
0.00 |
R9136:Ncoa7
|
UTSW |
10 |
30,567,628 (GRCm39) |
missense |
probably benign |
0.00 |
|
Predicted Primers |
PCR Primer
(F):5'- TCCTTAGGAAACGCACAATGTACTCAC -3'
(R):5'- GGGGTAGTTTAGAAGACTCCATGTTGC -3'
Sequencing Primer
(F):5'- gggagtcaacccaacatgag -3'
(R):5'- GAGGCACTGAGTGTGATGTA -3'
|
Posted On |
2014-05-09 |