Incidental Mutation 'R1709:Crocc'
| ID |
190299 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Crocc
|
| Ensembl Gene |
ENSMUSG00000040860 |
| Gene Name |
ciliary rootlet coiled-coil, rootletin |
| Synonyms |
|
| MMRRC Submission |
039742-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.174)
|
| Stock # |
R1709 (G1)
|
| Quality Score |
118 |
|
Status
|
Not validated
|
| Chromosome |
4 |
| Chromosomal Location |
140743948-140787861 bp(-) (GRCm39) |
| Type of Mutation |
critical splice donor site (2 bp from exon) |
| DNA Base Change (assembly) |
A to G
at 140753410 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000126543
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000040222]
[ENSMUST00000040222]
[ENSMUST00000040222]
[ENSMUST00000040222]
[ENSMUST00000040222]
[ENSMUST00000040222]
[ENSMUST00000097816]
[ENSMUST00000097816]
[ENSMUST00000097816]
[ENSMUST00000097816]
[ENSMUST00000097816]
[ENSMUST00000097816]
[ENSMUST00000102491]
[ENSMUST00000102491]
[ENSMUST00000102491]
[ENSMUST00000168157]
[ENSMUST00000168157]
[ENSMUST00000168157]
|
| AlphaFold |
Q8CJ40 |
| Predicted Effect |
probably null
Transcript: ENSMUST00000040222
|
| SMART Domains |
Protein: ENSMUSP00000037679
Gene: ENSMUSG00000040860
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
|
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
|
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
|
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
|
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
|
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
|
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
|
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
|
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
|
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
|
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
|
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
|
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
|
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
|
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
|
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
|
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
|
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
|
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
|
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
|
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
|
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
|
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
|
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
|
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000040222
|
| SMART Domains |
Protein: ENSMUSP00000037679
Gene: ENSMUSG00000040860
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
|
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
|
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
|
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
|
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
|
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
|
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
|
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
|
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
|
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
|
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
|
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
|
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
|
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
|
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
|
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
|
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
|
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
|
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
|
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
|
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
|
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
|
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
|
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
|
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000040222
|
| SMART Domains |
Protein: ENSMUSP00000037679
Gene: ENSMUSG00000040860
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
|
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
|
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
|
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
|
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
|
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
|
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
|
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
|
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
|
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
|
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
|
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
|
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
|
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
|
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
|
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
|
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
|
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
|
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
|
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
|
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
|
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
|
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
|
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
|
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000040222
|
| SMART Domains |
Protein: ENSMUSP00000037679
Gene: ENSMUSG00000040860
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
|
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
|
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
|
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
|
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
|
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
|
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
|
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
|
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
|
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
|
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
|
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
|
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
|
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
|
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
|
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
|
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
|
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
|
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
|
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
|
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
|
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
|
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
|
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
|
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000040222
|
| SMART Domains |
Protein: ENSMUSP00000037679
Gene: ENSMUSG00000040860
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
|
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
|
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
|
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
|
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
|
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
|
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
|
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
|
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
|
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
|
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
|
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
|
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
|
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
|
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
|
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
|
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
|
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
|
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
|
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
|
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
|
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
|
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
|
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
|
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000040222
|
| SMART Domains |
Protein: ENSMUSP00000037679
Gene: ENSMUSG00000040860
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
|
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
|
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
|
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
|
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
|
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
|
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
|
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
|
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
|
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
|
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
|
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
|
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
|
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
|
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
|
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
|
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
|
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
|
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
|
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
|
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
|
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
|
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
|
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
|
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000097816
|
| SMART Domains |
Protein: ENSMUSP00000095425
Gene: ENSMUSG00000040860
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
|
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
|
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
|
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
|
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
|
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
|
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
|
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
|
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
|
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
|
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
|
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
|
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
|
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
|
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
|
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
|
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
|
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
|
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
|
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
|
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
|
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
|
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
|
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
|
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000097816
|
| SMART Domains |
Protein: ENSMUSP00000095425
Gene: ENSMUSG00000040860
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
|
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
|
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
|
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
|
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
|
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
|
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
|
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
|
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
|
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
|
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
|
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
|
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
|
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
|
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
|
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
|
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
|
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
|
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
|
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
|
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
|
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
|
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
|
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
|
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000097816
|
| SMART Domains |
Protein: ENSMUSP00000095425
Gene: ENSMUSG00000040860
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
|
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
|
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
|
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
|
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
|
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
|
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
|
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
|
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
|
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
|
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
|
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
|
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
|
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
|
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
|
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
|
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
|
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
|
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
|
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
|
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
|
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
|
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
|
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
|
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000097816
|
| SMART Domains |
Protein: ENSMUSP00000095425
Gene: ENSMUSG00000040860
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
|
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
|
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
|
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
|
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
|
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
|
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
|
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
|
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
|
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
|
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
|
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
|
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
|
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
|
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
|
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
|
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
|
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
|
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
|
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
|
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
|
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
|
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
|
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
|
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000097816
|
| SMART Domains |
Protein: ENSMUSP00000095425
Gene: ENSMUSG00000040860
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
|
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
|
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
|
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
|
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
|
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
|
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
|
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
|
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
|
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
|
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
|
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
|
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
|
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
|
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
|
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
|
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
|
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
|
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
|
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
|
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
|
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
|
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
|
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
|
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000097816
|
| SMART Domains |
Protein: ENSMUSP00000095425
Gene: ENSMUSG00000040860
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
|
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
|
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
|
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
|
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
|
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
|
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
|
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
|
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
|
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
|
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
|
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
|
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
|
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
|
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
|
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
|
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
|
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
|
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
|
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
|
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
|
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
|
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
|
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
|
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000102491
|
| SMART Domains |
Protein: ENSMUSP00000099549
Gene: ENSMUSG00000040860
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
2 |
15 |
N/A |
INTRINSIC |
|
low complexity region
|
77 |
93 |
N/A |
INTRINSIC |
|
Pfam:Rootletin
|
158 |
336 |
9.7e-65 |
PFAM |
|
low complexity region
|
354 |
381 |
N/A |
INTRINSIC |
|
internal_repeat_2
|
462 |
479 |
1.77e-6 |
PROSPERO |
|
low complexity region
|
493 |
514 |
N/A |
INTRINSIC |
|
internal_repeat_3
|
527 |
557 |
8.63e-6 |
PROSPERO |
|
internal_repeat_6
|
533 |
556 |
4.21e-5 |
PROSPERO |
|
low complexity region
|
561 |
575 |
N/A |
INTRINSIC |
|
low complexity region
|
576 |
594 |
N/A |
INTRINSIC |
|
low complexity region
|
617 |
638 |
N/A |
INTRINSIC |
|
low complexity region
|
788 |
807 |
N/A |
INTRINSIC |
|
low complexity region
|
863 |
880 |
N/A |
INTRINSIC |
|
low complexity region
|
1009 |
1039 |
N/A |
INTRINSIC |
|
internal_repeat_4
|
1050 |
1068 |
4.21e-5 |
PROSPERO |
|
internal_repeat_7
|
1057 |
1070 |
9.31e-5 |
PROSPERO |
|
internal_repeat_2
|
1057 |
1074 |
1.77e-6 |
PROSPERO |
|
internal_repeat_4
|
1061 |
1078 |
4.21e-5 |
PROSPERO |
|
internal_repeat_1
|
1076 |
1101 |
3.36e-8 |
PROSPERO |
|
internal_repeat_7
|
1192 |
1205 |
9.31e-5 |
PROSPERO |
|
low complexity region
|
1271 |
1288 |
N/A |
INTRINSIC |
|
internal_repeat_5
|
1302 |
1328 |
4.21e-5 |
PROSPERO |
|
low complexity region
|
1354 |
1365 |
N/A |
INTRINSIC |
|
low complexity region
|
1417 |
1433 |
N/A |
INTRINSIC |
|
low complexity region
|
1434 |
1453 |
N/A |
INTRINSIC |
|
low complexity region
|
1461 |
1473 |
N/A |
INTRINSIC |
|
internal_repeat_6
|
1697 |
1720 |
4.21e-5 |
PROSPERO |
|
low complexity region
|
1723 |
1740 |
N/A |
INTRINSIC |
|
coiled coil region
|
1744 |
1871 |
N/A |
INTRINSIC |
|
coiled coil region
|
1892 |
1996 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000102491
|
| SMART Domains |
Protein: ENSMUSP00000099549
Gene: ENSMUSG00000040860
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
2 |
15 |
N/A |
INTRINSIC |
|
low complexity region
|
77 |
93 |
N/A |
INTRINSIC |
|
Pfam:Rootletin
|
158 |
336 |
9.7e-65 |
PFAM |
|
low complexity region
|
354 |
381 |
N/A |
INTRINSIC |
|
internal_repeat_2
|
462 |
479 |
1.77e-6 |
PROSPERO |
|
low complexity region
|
493 |
514 |
N/A |
INTRINSIC |
|
internal_repeat_3
|
527 |
557 |
8.63e-6 |
PROSPERO |
|
internal_repeat_6
|
533 |
556 |
4.21e-5 |
PROSPERO |
|
low complexity region
|
561 |
575 |
N/A |
INTRINSIC |
|
low complexity region
|
576 |
594 |
N/A |
INTRINSIC |
|
low complexity region
|
617 |
638 |
N/A |
INTRINSIC |
|
low complexity region
|
788 |
807 |
N/A |
INTRINSIC |
|
low complexity region
|
863 |
880 |
N/A |
INTRINSIC |
|
low complexity region
|
1009 |
1039 |
N/A |
INTRINSIC |
|
internal_repeat_4
|
1050 |
1068 |
4.21e-5 |
PROSPERO |
|
internal_repeat_7
|
1057 |
1070 |
9.31e-5 |
PROSPERO |
|
internal_repeat_2
|
1057 |
1074 |
1.77e-6 |
PROSPERO |
|
internal_repeat_4
|
1061 |
1078 |
4.21e-5 |
PROSPERO |
|
internal_repeat_1
|
1076 |
1101 |
3.36e-8 |
PROSPERO |
|
internal_repeat_7
|
1192 |
1205 |
9.31e-5 |
PROSPERO |
|
low complexity region
|
1271 |
1288 |
N/A |
INTRINSIC |
|
internal_repeat_5
|
1302 |
1328 |
4.21e-5 |
PROSPERO |
|
low complexity region
|
1354 |
1365 |
N/A |
INTRINSIC |
|
low complexity region
|
1417 |
1433 |
N/A |
INTRINSIC |
|
low complexity region
|
1434 |
1453 |
N/A |
INTRINSIC |
|
low complexity region
|
1461 |
1473 |
N/A |
INTRINSIC |
|
internal_repeat_6
|
1697 |
1720 |
4.21e-5 |
PROSPERO |
|
low complexity region
|
1723 |
1740 |
N/A |
INTRINSIC |
|
coiled coil region
|
1744 |
1871 |
N/A |
INTRINSIC |
|
coiled coil region
|
1892 |
1996 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000102491
|
| SMART Domains |
Protein: ENSMUSP00000099549
Gene: ENSMUSG00000040860
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
2 |
15 |
N/A |
INTRINSIC |
|
low complexity region
|
77 |
93 |
N/A |
INTRINSIC |
|
Pfam:Rootletin
|
158 |
336 |
9.7e-65 |
PFAM |
|
low complexity region
|
354 |
381 |
N/A |
INTRINSIC |
|
internal_repeat_2
|
462 |
479 |
1.77e-6 |
PROSPERO |
|
low complexity region
|
493 |
514 |
N/A |
INTRINSIC |
|
internal_repeat_3
|
527 |
557 |
8.63e-6 |
PROSPERO |
|
internal_repeat_6
|
533 |
556 |
4.21e-5 |
PROSPERO |
|
low complexity region
|
561 |
575 |
N/A |
INTRINSIC |
|
low complexity region
|
576 |
594 |
N/A |
INTRINSIC |
|
low complexity region
|
617 |
638 |
N/A |
INTRINSIC |
|
low complexity region
|
788 |
807 |
N/A |
INTRINSIC |
|
low complexity region
|
863 |
880 |
N/A |
INTRINSIC |
|
low complexity region
|
1009 |
1039 |
N/A |
INTRINSIC |
|
internal_repeat_4
|
1050 |
1068 |
4.21e-5 |
PROSPERO |
|
internal_repeat_7
|
1057 |
1070 |
9.31e-5 |
PROSPERO |
|
internal_repeat_2
|
1057 |
1074 |
1.77e-6 |
PROSPERO |
|
internal_repeat_4
|
1061 |
1078 |
4.21e-5 |
PROSPERO |
|
internal_repeat_1
|
1076 |
1101 |
3.36e-8 |
PROSPERO |
|
internal_repeat_7
|
1192 |
1205 |
9.31e-5 |
PROSPERO |
|
low complexity region
|
1271 |
1288 |
N/A |
INTRINSIC |
|
internal_repeat_5
|
1302 |
1328 |
4.21e-5 |
PROSPERO |
|
low complexity region
|
1354 |
1365 |
N/A |
INTRINSIC |
|
low complexity region
|
1417 |
1433 |
N/A |
INTRINSIC |
|
low complexity region
|
1434 |
1453 |
N/A |
INTRINSIC |
|
low complexity region
|
1461 |
1473 |
N/A |
INTRINSIC |
|
internal_repeat_6
|
1697 |
1720 |
4.21e-5 |
PROSPERO |
|
low complexity region
|
1723 |
1740 |
N/A |
INTRINSIC |
|
coiled coil region
|
1744 |
1871 |
N/A |
INTRINSIC |
|
coiled coil region
|
1892 |
1996 |
N/A |
INTRINSIC |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000122846
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000124286
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000137721
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000151455
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000168157
|
| SMART Domains |
Protein: ENSMUSP00000126543
Gene: ENSMUSG00000040860
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
|
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
|
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
|
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
|
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
|
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
|
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
|
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
|
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
|
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
|
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
|
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
|
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
|
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
|
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
|
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
|
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
|
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
|
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
|
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
|
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
|
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
|
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
|
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
|
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000168157
|
| SMART Domains |
Protein: ENSMUSP00000126543
Gene: ENSMUSG00000040860
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
|
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
|
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
|
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
|
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
|
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
|
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
|
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
|
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
|
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
|
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
|
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
|
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
|
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
|
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
|
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
|
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
|
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
|
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
|
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
|
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
|
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
|
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
|
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
|
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000168157
|
| SMART Domains |
Protein: ENSMUSP00000126543
Gene: ENSMUSG00000040860
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
|
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
|
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
|
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
|
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
|
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
|
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
|
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
|
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
|
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
|
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
|
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
|
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
|
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
|
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
|
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
|
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
|
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
|
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
|
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
|
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
|
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
|
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
|
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
|
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
|
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
| Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.4%
- 10x: 96.4%
- 20x: 92.9%
|
| Validation Efficiency |
|
| MGI Phenotype |
PHENOTYPE: Mice homozygous for a null mutation show no apparent functional deficits in phototransduction and ciliary beating in sensory and motile cilia. However, photoreceptors degenerate over time, and lungs appear prone to pathological changes. [provided by MGI curators]
|
| Allele List at MGI |
All alleles(4) : Targeted, knock-out(1) Gene trapped(3) |
| Other mutations in this stock |
Total: 94 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Aacs |
A |
G |
5: 125,566,942 (GRCm39) |
K152E |
probably benign |
Het |
| Adgrd1 |
T |
C |
5: 129,256,292 (GRCm39) |
V641A |
possibly damaging |
Het |
| Adgrv1 |
A |
T |
13: 81,741,179 (GRCm39) |
V95E |
probably damaging |
Het |
| Agbl5 |
G |
A |
5: 31,063,585 (GRCm39) |
C872Y |
probably damaging |
Het |
| Aldh1a7 |
G |
T |
19: 20,693,316 (GRCm39) |
T201K |
probably damaging |
Het |
| Aox1 |
C |
T |
1: 58,116,633 (GRCm39) |
A788V |
probably benign |
Het |
| Apob |
T |
C |
12: 8,059,306 (GRCm39) |
V2563A |
probably damaging |
Het |
| Atcay |
G |
A |
10: 81,049,065 (GRCm39) |
T179I |
probably damaging |
Het |
| Atf5 |
A |
T |
7: 44,462,707 (GRCm39) |
L139Q |
probably benign |
Het |
| Atp13a3 |
T |
C |
16: 30,134,659 (GRCm39) |
T1205A |
probably benign |
Het |
| Atr |
C |
T |
9: 95,753,129 (GRCm39) |
T656I |
probably benign |
Het |
| Bloc1s3 |
T |
C |
7: 19,241,453 (GRCm39) |
E25G |
possibly damaging |
Het |
| Brap |
T |
C |
5: 121,803,353 (GRCm39) |
|
probably null |
Het |
| C6 |
G |
T |
15: 4,820,452 (GRCm39) |
A488S |
probably benign |
Het |
| Ccin |
T |
C |
4: 43,984,133 (GRCm39) |
F180S |
probably damaging |
Het |
| Cd207 |
T |
C |
6: 83,649,818 (GRCm39) |
I256V |
possibly damaging |
Het |
| Cdc42bpa |
G |
T |
1: 179,894,789 (GRCm39) |
C323F |
probably damaging |
Het |
| Cfap57 |
T |
C |
4: 118,428,901 (GRCm39) |
T1022A |
probably benign |
Het |
| Cmtr2 |
A |
T |
8: 110,948,581 (GRCm39) |
Q297L |
probably benign |
Het |
| Coro7 |
A |
T |
16: 4,452,305 (GRCm39) |
|
probably null |
Het |
| Cpsf2 |
T |
A |
12: 101,965,801 (GRCm39) |
Y589N |
probably damaging |
Het |
| Cpxm2 |
T |
C |
7: 131,661,563 (GRCm39) |
Y408C |
probably damaging |
Het |
| Cryzl1 |
A |
C |
16: 91,509,124 (GRCm39) |
F59C |
probably damaging |
Het |
| Csmd2 |
T |
C |
4: 128,389,988 (GRCm39) |
V2241A |
probably damaging |
Het |
| Cxcl15 |
C |
A |
5: 90,949,275 (GRCm39) |
H147N |
unknown |
Het |
| Dennd4a |
A |
G |
9: 64,796,887 (GRCm39) |
T860A |
possibly damaging |
Het |
| Dnah10 |
C |
T |
5: 124,837,155 (GRCm39) |
P966L |
probably damaging |
Het |
| Dpp9 |
T |
A |
17: 56,501,431 (GRCm39) |
M594L |
probably benign |
Het |
| Dspp |
C |
A |
5: 104,323,590 (GRCm39) |
N244K |
probably damaging |
Het |
| Efcab8 |
T |
A |
2: 153,656,290 (GRCm39) |
|
probably null |
Het |
| Elapor2 |
C |
T |
5: 9,490,726 (GRCm39) |
R579* |
probably null |
Het |
| Fabp3 |
C |
T |
4: 130,206,180 (GRCm39) |
T57I |
probably benign |
Het |
| Fbxw17 |
A |
G |
13: 50,585,693 (GRCm39) |
M299V |
probably benign |
Het |
| Fbxw7 |
T |
A |
3: 84,883,659 (GRCm39) |
I530N |
probably damaging |
Het |
| Gp2 |
C |
A |
7: 119,050,808 (GRCm39) |
D308Y |
probably null |
Het |
| Gpd2 |
G |
A |
2: 57,247,667 (GRCm39) |
V537M |
probably damaging |
Het |
| Gpr18 |
T |
A |
14: 122,149,404 (GRCm39) |
Y207F |
probably damaging |
Het |
| Grip1 |
A |
T |
10: 119,733,620 (GRCm39) |
D20V |
probably damaging |
Het |
| Gzmf |
A |
C |
14: 56,444,397 (GRCm39) |
F59V |
probably damaging |
Het |
| H3c1 |
T |
A |
13: 23,945,964 (GRCm39) |
I125F |
probably damaging |
Het |
| Igfn1 |
T |
C |
1: 135,883,311 (GRCm39) |
I2732V |
probably benign |
Het |
| Ipo8 |
A |
T |
6: 148,684,226 (GRCm39) |
D855E |
probably benign |
Het |
| Klrk1 |
A |
T |
6: 129,591,682 (GRCm39) |
|
probably null |
Het |
| Megf11 |
A |
G |
9: 64,602,694 (GRCm39) |
Y876C |
probably damaging |
Het |
| Mettl8 |
G |
T |
2: 70,812,495 (GRCm39) |
Q12K |
probably benign |
Het |
| Mrgprf |
T |
C |
7: 144,861,954 (GRCm39) |
F172S |
probably benign |
Het |
| Mycbp2 |
G |
A |
14: 103,461,852 (GRCm39) |
T1432I |
probably damaging |
Het |
| Nek11 |
A |
C |
9: 105,225,260 (GRCm39) |
L84R |
probably damaging |
Het |
| Nlrp1b |
T |
C |
11: 71,092,099 (GRCm39) |
E9G |
probably benign |
Het |
| Nrxn1 |
T |
C |
17: 90,344,615 (GRCm39) |
I433V |
probably damaging |
Het |
| Nup153 |
A |
G |
13: 46,847,450 (GRCm39) |
C660R |
probably damaging |
Het |
| Or1o11 |
T |
A |
17: 37,757,091 (GRCm39) |
Y226* |
probably null |
Het |
| Or2a25 |
T |
C |
6: 42,889,078 (GRCm39) |
V207A |
possibly damaging |
Het |
| Or4z4 |
G |
T |
19: 12,076,245 (GRCm39) |
P253T |
probably damaging |
Het |
| Or5h26 |
T |
A |
16: 58,988,264 (GRCm39) |
M81L |
probably benign |
Het |
| P2rx7 |
T |
A |
5: 122,808,528 (GRCm39) |
N303K |
possibly damaging |
Het |
| Pank4 |
T |
C |
4: 155,054,504 (GRCm39) |
L159P |
probably damaging |
Het |
| Pcdhb22 |
A |
T |
18: 37,651,553 (GRCm39) |
H7L |
probably benign |
Het |
| Pdzd8 |
A |
T |
19: 59,289,771 (GRCm39) |
I543N |
probably benign |
Het |
| Pramel25 |
T |
C |
4: 143,520,116 (GRCm39) |
V120A |
possibly damaging |
Het |
| Prrc2b |
C |
A |
2: 32,084,473 (GRCm39) |
R313S |
probably damaging |
Het |
| Rbm12b1 |
T |
C |
4: 12,145,827 (GRCm39) |
C600R |
probably benign |
Het |
| Rem1 |
G |
A |
2: 152,476,455 (GRCm39) |
V238M |
probably damaging |
Het |
| Rfx6 |
T |
A |
10: 51,554,498 (GRCm39) |
M113K |
possibly damaging |
Het |
| Rlf |
A |
T |
4: 121,007,020 (GRCm39) |
D653E |
probably benign |
Het |
| Rnf130 |
A |
G |
11: 49,978,213 (GRCm39) |
D258G |
possibly damaging |
Het |
| Robo2 |
A |
G |
16: 73,753,411 (GRCm39) |
V822A |
possibly damaging |
Het |
| Rps6kc1 |
G |
T |
1: 190,532,533 (GRCm39) |
Q490K |
possibly damaging |
Het |
| Scn9a |
T |
C |
2: 66,313,850 (GRCm39) |
Y1945C |
probably damaging |
Het |
| Setd2 |
T |
A |
9: 110,378,925 (GRCm39) |
D913E |
probably benign |
Het |
| Sfr1 |
G |
T |
19: 47,723,442 (GRCm39) |
E315D |
possibly damaging |
Het |
| Smarca5 |
G |
A |
8: 81,435,849 (GRCm39) |
R763* |
probably null |
Het |
| Sugct |
A |
C |
13: 17,847,151 (GRCm39) |
I44S |
probably damaging |
Het |
| Syce1l |
A |
G |
8: 114,380,662 (GRCm39) |
|
probably null |
Het |
| Tbc1d8b |
A |
G |
X: 138,634,829 (GRCm39) |
I654V |
probably benign |
Het |
| Tcf23 |
T |
A |
5: 31,130,852 (GRCm39) |
Y163* |
probably null |
Het |
| Terf2ip |
TG |
T |
8: 112,738,238 (GRCm39) |
|
probably null |
Het |
| Tmem158 |
T |
C |
9: 123,088,950 (GRCm39) |
S221G |
possibly damaging |
Het |
| Tnrc6a |
A |
G |
7: 122,769,205 (GRCm39) |
T332A |
probably benign |
Het |
| Trappc4 |
T |
C |
9: 44,318,508 (GRCm39) |
T31A |
probably benign |
Het |
| Trim27 |
T |
C |
13: 21,372,235 (GRCm39) |
|
probably null |
Het |
| Ttyh2 |
T |
A |
11: 114,599,301 (GRCm39) |
L330Q |
probably damaging |
Het |
| Tubgcp3 |
A |
T |
8: 12,689,532 (GRCm39) |
L578* |
probably null |
Het |
| Txndc11 |
C |
A |
16: 10,946,565 (GRCm39) |
E83* |
probably null |
Het |
| Utp20 |
T |
C |
10: 88,585,159 (GRCm39) |
K2635R |
probably benign |
Het |
| V1ra8 |
C |
T |
6: 90,180,304 (GRCm39) |
T169I |
probably damaging |
Het |
| Vcl |
G |
A |
14: 21,069,441 (GRCm39) |
V706I |
probably benign |
Het |
| Vmn2r106 |
A |
T |
17: 20,499,373 (GRCm39) |
D179E |
probably benign |
Het |
| Vmn2r80 |
T |
C |
10: 79,030,223 (GRCm39) |
M683T |
probably benign |
Het |
| Xirp2 |
A |
G |
2: 67,340,215 (GRCm39) |
I819V |
probably benign |
Het |
| Zfp735 |
T |
C |
11: 73,602,589 (GRCm39) |
F511S |
probably benign |
Het |
| Zfp831 |
T |
C |
2: 174,487,683 (GRCm39) |
V786A |
probably benign |
Het |
| Zfp992 |
T |
A |
4: 146,550,949 (GRCm39) |
H223Q |
probably benign |
Het |
| Zfyve19 |
A |
C |
2: 119,041,300 (GRCm39) |
Q72P |
probably damaging |
Het |
|
| Other mutations in Crocc |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01389:Crocc
|
APN |
4 |
140,749,423 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01474:Crocc
|
APN |
4 |
140,762,703 (GRCm39) |
splice site |
probably benign |
|
|
IGL01859:Crocc
|
APN |
4 |
140,756,601 (GRCm39) |
missense |
probably benign |
0.07 |
|
IGL02161:Crocc
|
APN |
4 |
140,761,302 (GRCm39) |
missense |
probably benign |
0.01 |
|
IGL02244:Crocc
|
APN |
4 |
140,765,231 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL02970:Crocc
|
APN |
4 |
140,757,557 (GRCm39) |
missense |
possibly damaging |
0.49 |
|
N/A:Crocc
|
UTSW |
4 |
140,749,057 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0158:Crocc
|
UTSW |
4 |
140,769,553 (GRCm39) |
splice site |
probably benign |
|
|
R0280:Crocc
|
UTSW |
4 |
140,755,737 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0448:Crocc
|
UTSW |
4 |
140,769,502 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0532:Crocc
|
UTSW |
4 |
140,757,558 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R0597:Crocc
|
UTSW |
4 |
140,744,382 (GRCm39) |
missense |
probably benign |
|
|
R0597:Crocc
|
UTSW |
4 |
140,747,224 (GRCm39) |
missense |
probably benign |
0.06 |
|
R0761:Crocc
|
UTSW |
4 |
140,774,387 (GRCm39) |
missense |
probably benign |
0.01 |
|
R0761:Crocc
|
UTSW |
4 |
140,757,087 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1238:Crocc
|
UTSW |
4 |
140,762,675 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1460:Crocc
|
UTSW |
4 |
140,756,551 (GRCm39) |
nonsense |
probably null |
|
|
R1515:Crocc
|
UTSW |
4 |
140,747,048 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1557:Crocc
|
UTSW |
4 |
140,752,776 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R1561:Crocc
|
UTSW |
4 |
140,757,579 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1641:Crocc
|
UTSW |
4 |
140,744,388 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1785:Crocc
|
UTSW |
4 |
140,749,113 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1786:Crocc
|
UTSW |
4 |
140,749,113 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1793:Crocc
|
UTSW |
4 |
140,746,620 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1897:Crocc
|
UTSW |
4 |
140,746,047 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1935:Crocc
|
UTSW |
4 |
140,761,369 (GRCm39) |
missense |
possibly damaging |
0.78 |
|
R2037:Crocc
|
UTSW |
4 |
140,774,253 (GRCm39) |
critical splice donor site |
probably null |
|
|
R2127:Crocc
|
UTSW |
4 |
140,744,407 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2129:Crocc
|
UTSW |
4 |
140,744,407 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2130:Crocc
|
UTSW |
4 |
140,756,413 (GRCm39) |
missense |
probably benign |
0.04 |
|
R2136:Crocc
|
UTSW |
4 |
140,760,265 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2298:Crocc
|
UTSW |
4 |
140,752,770 (GRCm39) |
missense |
probably benign |
0.30 |
|
R2847:Crocc
|
UTSW |
4 |
140,746,067 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R2848:Crocc
|
UTSW |
4 |
140,746,067 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R2913:Crocc
|
UTSW |
4 |
140,747,661 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3415:Crocc
|
UTSW |
4 |
140,773,758 (GRCm39) |
missense |
possibly damaging |
0.75 |
|
R3416:Crocc
|
UTSW |
4 |
140,773,758 (GRCm39) |
missense |
possibly damaging |
0.75 |
|
R3417:Crocc
|
UTSW |
4 |
140,773,758 (GRCm39) |
missense |
possibly damaging |
0.75 |
|
R4082:Crocc
|
UTSW |
4 |
140,761,282 (GRCm39) |
splice site |
probably null |
|
|
R4454:Crocc
|
UTSW |
4 |
140,747,716 (GRCm39) |
missense |
possibly damaging |
0.52 |
|
R4591:Crocc
|
UTSW |
4 |
140,745,983 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4597:Crocc
|
UTSW |
4 |
140,747,088 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4984:Crocc
|
UTSW |
4 |
140,761,763 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4992:Crocc
|
UTSW |
4 |
140,773,977 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R5109:Crocc
|
UTSW |
4 |
140,755,722 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5143:Crocc
|
UTSW |
4 |
140,768,350 (GRCm39) |
missense |
probably benign |
0.01 |
|
R5381:Crocc
|
UTSW |
4 |
140,756,622 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R5684:Crocc
|
UTSW |
4 |
140,778,455 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5757:Crocc
|
UTSW |
4 |
140,770,875 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5795:Crocc
|
UTSW |
4 |
140,769,118 (GRCm39) |
frame shift |
probably null |
|
|
R5796:Crocc
|
UTSW |
4 |
140,769,118 (GRCm39) |
frame shift |
probably null |
|
|
R5798:Crocc
|
UTSW |
4 |
140,769,118 (GRCm39) |
frame shift |
probably null |
|
|
R5815:Crocc
|
UTSW |
4 |
140,762,507 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5955:Crocc
|
UTSW |
4 |
140,745,229 (GRCm39) |
missense |
possibly damaging |
0.75 |
|
R6031:Crocc
|
UTSW |
4 |
140,761,668 (GRCm39) |
critical splice donor site |
probably null |
|
|
R6063:Crocc
|
UTSW |
4 |
140,773,851 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6063:Crocc
|
UTSW |
4 |
140,769,032 (GRCm39) |
missense |
probably benign |
0.08 |
|
R7086:Crocc
|
UTSW |
4 |
140,774,368 (GRCm39) |
missense |
possibly damaging |
0.47 |
|
R7282:Crocc
|
UTSW |
4 |
140,749,652 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7293:Crocc
|
UTSW |
4 |
140,770,867 (GRCm39) |
missense |
probably benign |
0.17 |
|
R7404:Crocc
|
UTSW |
4 |
140,753,497 (GRCm39) |
missense |
possibly damaging |
0.46 |
|
R7571:Crocc
|
UTSW |
4 |
140,773,360 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
R7646:Crocc
|
UTSW |
4 |
140,748,966 (GRCm39) |
missense |
probably null |
0.94 |
|
R7782:Crocc
|
UTSW |
4 |
140,752,597 (GRCm39) |
missense |
probably benign |
0.05 |
|
R8053:Crocc
|
UTSW |
4 |
140,770,230 (GRCm39) |
critical splice donor site |
probably null |
|
|
R8762:Crocc
|
UTSW |
4 |
140,761,369 (GRCm39) |
missense |
possibly damaging |
0.78 |
|
R9021:Crocc
|
UTSW |
4 |
140,749,674 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9188:Crocc
|
UTSW |
4 |
140,747,151 (GRCm39) |
missense |
probably benign |
0.04 |
|
R9272:Crocc
|
UTSW |
4 |
140,747,132 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9411:Crocc
|
UTSW |
4 |
140,749,577 (GRCm39) |
critical splice donor site |
probably null |
|
|
R9647:Crocc
|
UTSW |
4 |
140,774,335 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9667:Crocc
|
UTSW |
4 |
140,748,988 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9706:Crocc
|
UTSW |
4 |
140,746,046 (GRCm39) |
missense |
possibly damaging |
0.76 |
|
R9780:Crocc
|
UTSW |
4 |
140,756,556 (GRCm39) |
missense |
probably benign |
0.01 |
|
X0065:Crocc
|
UTSW |
4 |
140,769,103 (GRCm39) |
missense |
possibly damaging |
0.57 |
|
| Predicted Primers |
PCR Primer
(F):5'- TAGTGAGCACAGCACCTTCCTCTC -3'
(R):5'- CCTGCCTGTTCTGGTTCACAGATG -3'
Sequencing Primer
(F):5'- gccttgacctttctgagcc -3'
(R):5'- GTTCTGGTTCACAGATGAAGACAC -3'
|
| Posted On |
2014-05-14 |
Incidental Mutation