Incidental Mutation 'R1750:Tnc'
ID |
193373 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Tnc
|
Ensembl Gene |
ENSMUSG00000028364 |
Gene Name |
tenascin C |
Synonyms |
cytotactin, C130033P17Rik, TN-C, hexabrachion, tenascin-C, Hxb, TN |
MMRRC Submission |
039782-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R1750 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
4 |
Chromosomal Location |
63878022-63965252 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to G
at 63890972 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Tryptophan to Arginine
at position 1728
(W1728R)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000102995
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000030056]
[ENSMUST00000107372]
[ENSMUST00000107377]
|
AlphaFold |
Q80YX1 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000030056
AA Change: W1637R
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000030056 Gene: ENSMUSG00000028364 AA Change: W1637R
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
22 |
N/A |
INTRINSIC |
low complexity region
|
121 |
138 |
N/A |
INTRINSIC |
EGF
|
189 |
217 |
1.87e1 |
SMART |
EGF_like
|
220 |
248 |
3.5e1 |
SMART |
EGF
|
251 |
280 |
4.89e0 |
SMART |
EGF
|
283 |
311 |
3.23e0 |
SMART |
EGF_like
|
314 |
342 |
2.98e1 |
SMART |
EGF
|
345 |
373 |
1.87e1 |
SMART |
EGF
|
376 |
404 |
3.97e0 |
SMART |
EGF
|
407 |
435 |
8.52e0 |
SMART |
EGF
|
438 |
466 |
3.01e0 |
SMART |
EGF
|
469 |
497 |
3.46e0 |
SMART |
EGF
|
500 |
528 |
3.71e0 |
SMART |
EGF
|
531 |
559 |
4.32e-1 |
SMART |
EGF
|
562 |
590 |
1.84e1 |
SMART |
EGF
|
593 |
621 |
3.82e-2 |
SMART |
FN3
|
623 |
701 |
8.9e-8 |
SMART |
FN3
|
712 |
794 |
1.53e-6 |
SMART |
FN3
|
803 |
884 |
7.23e-8 |
SMART |
FN3
|
893 |
974 |
1.71e-9 |
SMART |
FN3
|
985 |
1062 |
2.56e-8 |
SMART |
FN3
|
1074 |
1152 |
8.58e-1 |
SMART |
FN3
|
1165 |
1245 |
2.72e-3 |
SMART |
FN3
|
1256 |
1334 |
5.36e-2 |
SMART |
FN3
|
1347 |
1427 |
4.93e0 |
SMART |
FN3
|
1438 |
1517 |
3.4e-4 |
SMART |
FN3
|
1528 |
1606 |
1.55e-7 |
SMART |
FN3
|
1617 |
1694 |
1.53e-6 |
SMART |
FN3
|
1705 |
1782 |
7.75e-8 |
SMART |
FBG
|
1797 |
2007 |
4.08e-124 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000107372
AA Change: W1728R
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000102995 Gene: ENSMUSG00000028364 AA Change: W1728R
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
22 |
N/A |
INTRINSIC |
low complexity region
|
121 |
138 |
N/A |
INTRINSIC |
EGF
|
189 |
217 |
1.87e1 |
SMART |
EGF_like
|
220 |
248 |
3.5e1 |
SMART |
EGF
|
251 |
280 |
4.89e0 |
SMART |
EGF
|
283 |
311 |
3.23e0 |
SMART |
EGF_like
|
314 |
342 |
2.98e1 |
SMART |
EGF
|
345 |
373 |
1.87e1 |
SMART |
EGF
|
376 |
404 |
3.97e0 |
SMART |
EGF
|
407 |
435 |
8.52e0 |
SMART |
EGF
|
438 |
466 |
3.01e0 |
SMART |
EGF
|
469 |
497 |
3.46e0 |
SMART |
EGF
|
500 |
528 |
3.71e0 |
SMART |
EGF
|
531 |
559 |
4.32e-1 |
SMART |
EGF
|
562 |
590 |
1.84e1 |
SMART |
EGF
|
593 |
621 |
3.82e-2 |
SMART |
FN3
|
623 |
701 |
8.9e-8 |
SMART |
FN3
|
712 |
794 |
1.53e-6 |
SMART |
FN3
|
803 |
884 |
7.23e-8 |
SMART |
FN3
|
893 |
974 |
1.71e-9 |
SMART |
FN3
|
985 |
1062 |
2.56e-8 |
SMART |
FN3
|
1074 |
1152 |
8.58e-1 |
SMART |
FN3
|
1165 |
1245 |
2.72e-3 |
SMART |
FN3
|
1256 |
1334 |
5.36e-2 |
SMART |
FN3
|
1347 |
1427 |
4.93e0 |
SMART |
FN3
|
1438 |
1517 |
2.75e0 |
SMART |
FN3
|
1529 |
1608 |
3.4e-4 |
SMART |
FN3
|
1619 |
1697 |
1.55e-7 |
SMART |
FN3
|
1708 |
1785 |
1.53e-6 |
SMART |
FN3
|
1796 |
1873 |
7.75e-8 |
SMART |
FBG
|
1888 |
2098 |
4.08e-124 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000107377
AA Change: W1637R
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000103000 Gene: ENSMUSG00000028364 AA Change: W1637R
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
22 |
N/A |
INTRINSIC |
low complexity region
|
121 |
138 |
N/A |
INTRINSIC |
EGF
|
189 |
217 |
1.87e1 |
SMART |
EGF_like
|
220 |
248 |
3.5e1 |
SMART |
EGF
|
251 |
280 |
4.89e0 |
SMART |
EGF
|
283 |
311 |
3.23e0 |
SMART |
EGF_like
|
314 |
342 |
2.98e1 |
SMART |
EGF
|
345 |
373 |
1.87e1 |
SMART |
EGF
|
376 |
404 |
3.97e0 |
SMART |
EGF
|
407 |
435 |
8.52e0 |
SMART |
EGF
|
438 |
466 |
3.01e0 |
SMART |
EGF
|
469 |
497 |
3.46e0 |
SMART |
EGF
|
500 |
528 |
3.71e0 |
SMART |
EGF
|
531 |
559 |
4.32e-1 |
SMART |
EGF
|
562 |
590 |
1.84e1 |
SMART |
EGF
|
593 |
621 |
3.82e-2 |
SMART |
FN3
|
623 |
701 |
8.9e-8 |
SMART |
FN3
|
712 |
794 |
1.53e-6 |
SMART |
FN3
|
803 |
884 |
7.23e-8 |
SMART |
FN3
|
893 |
974 |
1.71e-9 |
SMART |
FN3
|
985 |
1062 |
2.56e-8 |
SMART |
FN3
|
1074 |
1152 |
8.58e-1 |
SMART |
FN3
|
1165 |
1245 |
2.72e-3 |
SMART |
FN3
|
1256 |
1334 |
5.36e-2 |
SMART |
FN3
|
1347 |
1427 |
4.93e0 |
SMART |
FN3
|
1438 |
1517 |
3.4e-4 |
SMART |
FN3
|
1528 |
1606 |
1.55e-7 |
SMART |
FN3
|
1617 |
1694 |
1.53e-6 |
SMART |
FN3
|
1705 |
1782 |
7.75e-8 |
SMART |
FBG
|
1797 |
2007 |
4.08e-124 |
SMART |
|
Coding Region Coverage |
- 1x: 97.4%
- 3x: 96.9%
- 10x: 95.2%
- 20x: 91.9%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes an extracellular matrix protein with a spatially and temporally restricted tissue distribution. This protein is homohexameric with disulfide-linked subunits, and contains multiple EGF-like and fibronectin type-III domains. It is implicated in guidance of migrating neurons as well as axons during development, synaptic plasticity, and neuronal regeneration. [provided by RefSeq, Jul 2011] PHENOTYPE: Mice homozygous for several different targeted mutations show variable behavioral and nervous system phenotypes such as abnormal circadian rhythm, anxiety behavior, novelty-induced activity, swimming, impaired synaptic plasticity, long term potentiation and serotonin and dopamine neurotransmission. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 113 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
4933402N03Rik |
G |
T |
7: 130,747,859 (GRCm39) |
N44K |
probably benign |
Het |
Acd |
C |
A |
8: 106,425,524 (GRCm39) |
A270S |
possibly damaging |
Het |
Acnat1 |
G |
A |
4: 49,451,042 (GRCm39) |
T23I |
probably benign |
Het |
Adam26a |
T |
G |
8: 44,023,226 (GRCm39) |
E88A |
possibly damaging |
Het |
Adgrb1 |
G |
A |
15: 74,413,676 (GRCm39) |
V589M |
probably benign |
Het |
Agbl2 |
T |
A |
2: 90,646,720 (GRCm39) |
|
probably benign |
Het |
Aif1 |
G |
A |
17: 35,391,127 (GRCm39) |
P44L |
probably benign |
Het |
Amh |
AGCGCCTTGG |
AG |
10: 80,641,419 (GRCm39) |
|
probably null |
Het |
Asap2 |
T |
C |
12: 21,253,999 (GRCm39) |
L170P |
probably damaging |
Het |
Btg2 |
T |
C |
1: 134,006,769 (GRCm39) |
D8G |
probably benign |
Het |
Cacna1g |
A |
T |
11: 94,334,118 (GRCm39) |
V841E |
probably damaging |
Het |
Cacna2d1 |
C |
T |
5: 16,469,286 (GRCm39) |
P230L |
probably benign |
Het |
Cacna2d2 |
A |
T |
9: 107,401,843 (GRCm39) |
D766V |
probably damaging |
Het |
Carns1 |
A |
G |
19: 4,223,156 (GRCm39) |
W23R |
possibly damaging |
Het |
Cdk11b |
T |
A |
4: 155,713,137 (GRCm39) |
|
probably null |
Het |
Chrna3 |
T |
C |
9: 54,923,341 (GRCm39) |
S156G |
probably damaging |
Het |
Cmya5 |
A |
T |
13: 93,232,171 (GRCm39) |
N972K |
probably benign |
Het |
Cpne7 |
C |
A |
8: 123,861,263 (GRCm39) |
P541T |
probably damaging |
Het |
Cracd |
A |
G |
5: 77,005,522 (GRCm39) |
I628V |
unknown |
Het |
Csmd1 |
A |
T |
8: 15,967,303 (GRCm39) |
L3187I |
probably damaging |
Het |
Dbt |
A |
G |
3: 116,339,943 (GRCm39) |
I404V |
probably benign |
Het |
Dgki |
A |
T |
6: 36,893,369 (GRCm39) |
I819K |
probably damaging |
Het |
Dip2b |
T |
A |
15: 100,076,347 (GRCm39) |
S782T |
probably benign |
Het |
Dlc1 |
A |
T |
8: 37,325,244 (GRCm39) |
|
probably null |
Het |
Dnajc13 |
A |
T |
9: 104,098,676 (GRCm39) |
V459E |
probably damaging |
Het |
Enam |
A |
G |
5: 88,651,086 (GRCm39) |
E790G |
probably damaging |
Het |
Epb41l4a |
G |
C |
18: 33,961,261 (GRCm39) |
Y424* |
probably null |
Het |
Extl1 |
A |
G |
4: 134,089,999 (GRCm39) |
S370P |
probably benign |
Het |
Fan1 |
T |
C |
7: 64,022,761 (GRCm39) |
Y164C |
probably benign |
Het |
Fbxw15 |
G |
A |
9: 109,387,314 (GRCm39) |
S227F |
probably damaging |
Het |
Fbxw25 |
A |
T |
9: 109,479,141 (GRCm39) |
I370N |
probably benign |
Het |
Fcgbp |
T |
A |
7: 27,792,868 (GRCm39) |
Y957* |
probably null |
Het |
Gkap1 |
C |
A |
13: 58,384,857 (GRCm39) |
E77* |
probably null |
Het |
Gkn1 |
A |
T |
6: 87,326,105 (GRCm39) |
N28K |
unknown |
Het |
Gls2 |
A |
G |
10: 128,037,194 (GRCm39) |
E245G |
probably damaging |
Het |
Glyat |
G |
A |
19: 12,623,679 (GRCm39) |
V32I |
probably benign |
Het |
Gm2431 |
A |
T |
7: 141,811,762 (GRCm39) |
C47* |
probably null |
Het |
Gm5431 |
T |
C |
11: 48,785,658 (GRCm39) |
D239G |
probably benign |
Het |
Ift70a1 |
C |
T |
2: 75,810,599 (GRCm39) |
V495I |
probably benign |
Het |
Inpp5d |
T |
C |
1: 87,626,803 (GRCm39) |
F540L |
probably damaging |
Het |
Kcna1 |
A |
C |
6: 126,619,771 (GRCm39) |
I183S |
probably benign |
Het |
Kpna2 |
G |
T |
11: 106,882,271 (GRCm39) |
L212I |
probably damaging |
Het |
Krt36 |
C |
G |
11: 99,994,884 (GRCm39) |
R229S |
probably benign |
Het |
Krt78 |
G |
A |
15: 101,854,812 (GRCm39) |
H1000Y |
probably benign |
Het |
Krt90 |
A |
G |
15: 101,461,800 (GRCm39) |
|
probably benign |
Het |
Ldlrad4 |
C |
A |
18: 68,239,758 (GRCm39) |
F59L |
probably benign |
Het |
Lrrc3b |
T |
C |
14: 15,358,601 (GRCm38) |
N2D |
probably benign |
Het |
Madd |
T |
C |
2: 90,998,236 (GRCm39) |
D239G |
probably damaging |
Het |
Mapk8ip3 |
C |
T |
17: 25,133,433 (GRCm39) |
G332S |
probably null |
Het |
Mastl |
A |
T |
2: 23,036,093 (GRCm39) |
L141* |
probably null |
Het |
Mdh1b |
T |
C |
1: 63,758,681 (GRCm39) |
N304D |
probably benign |
Het |
Mfsd4b3-ps |
G |
T |
10: 39,823,929 (GRCm39) |
N110K |
probably benign |
Het |
Mtus2 |
T |
C |
5: 148,214,443 (GRCm39) |
S1035P |
probably damaging |
Het |
Muc21 |
T |
A |
17: 35,931,940 (GRCm39) |
|
probably benign |
Het |
Myh11 |
T |
C |
16: 14,033,654 (GRCm39) |
E1080G |
probably damaging |
Het |
Myh11 |
T |
A |
16: 14,018,622 (GRCm39) |
D1908V |
probably damaging |
Het |
Mypn |
A |
C |
10: 62,971,976 (GRCm39) |
M688R |
probably benign |
Het |
Nat8l |
G |
T |
5: 34,158,130 (GRCm39) |
C180F |
probably damaging |
Het |
Nip7 |
T |
A |
8: 107,784,018 (GRCm39) |
L86Q |
probably damaging |
Het |
Nisch |
C |
T |
14: 30,896,839 (GRCm39) |
|
probably benign |
Het |
Nop2 |
A |
G |
6: 125,114,601 (GRCm39) |
I283V |
probably benign |
Het |
Oas1h |
T |
A |
5: 121,009,840 (GRCm39) |
|
probably null |
Het |
Or10ag56 |
T |
C |
2: 87,139,196 (GRCm39) |
V41A |
probably benign |
Het |
Or2g25 |
A |
C |
17: 37,970,564 (GRCm39) |
I220S |
probably damaging |
Het |
Or4c101 |
C |
A |
2: 88,390,402 (GRCm39) |
D185E |
possibly damaging |
Het |
Or4c104 |
T |
C |
2: 88,586,117 (GRCm39) |
R301G |
probably benign |
Het |
Or56b1b |
A |
T |
7: 108,164,564 (GRCm39) |
L146* |
probably null |
Het |
Or5w17 |
T |
A |
2: 87,583,530 (GRCm39) |
D269V |
probably damaging |
Het |
Or8b42 |
T |
A |
9: 38,341,986 (GRCm39) |
M136K |
probably damaging |
Het |
P4hb |
A |
G |
11: 120,453,546 (GRCm39) |
V373A |
probably damaging |
Het |
Pappa2 |
C |
A |
1: 158,590,720 (GRCm39) |
E1645* |
probably null |
Het |
Pcdh10 |
G |
T |
3: 45,336,316 (GRCm39) |
E877* |
probably null |
Het |
Pcdhb17 |
C |
T |
18: 37,618,764 (GRCm39) |
R185C |
probably damaging |
Het |
Pcdhb17 |
A |
G |
18: 37,620,070 (GRCm39) |
H620R |
possibly damaging |
Het |
Pdcl3 |
T |
A |
1: 39,034,946 (GRCm39) |
F168I |
probably damaging |
Het |
Pde4a |
T |
A |
9: 21,114,528 (GRCm39) |
I365N |
probably damaging |
Het |
Pdzd2 |
A |
G |
15: 12,385,950 (GRCm39) |
V940A |
probably damaging |
Het |
Picalm |
T |
A |
7: 89,840,390 (GRCm39) |
S399T |
possibly damaging |
Het |
Pigk |
A |
T |
3: 152,450,101 (GRCm39) |
I249F |
probably damaging |
Het |
Plxnb1 |
C |
A |
9: 108,940,836 (GRCm39) |
H1570Q |
probably benign |
Het |
Plxnc1 |
A |
G |
10: 94,635,359 (GRCm39) |
Y1321H |
probably damaging |
Het |
Ppm1g |
G |
A |
5: 31,363,560 (GRCm39) |
S114F |
probably damaging |
Het |
Rassf4 |
A |
G |
6: 116,617,228 (GRCm39) |
M259T |
probably damaging |
Het |
Rbm47 |
T |
C |
5: 66,176,653 (GRCm39) |
K557E |
possibly damaging |
Het |
Rhobtb1 |
A |
G |
10: 69,115,236 (GRCm39) |
K21R |
probably damaging |
Het |
Selenoi |
T |
C |
5: 30,462,771 (GRCm39) |
F212S |
probably benign |
Het |
Shc3 |
T |
G |
13: 51,603,328 (GRCm39) |
Y259S |
probably damaging |
Het |
Skic3 |
T |
A |
13: 76,288,720 (GRCm39) |
L951Q |
possibly damaging |
Het |
Slc11a2 |
T |
C |
15: 100,299,168 (GRCm39) |
N134S |
probably damaging |
Het |
Slc9a7 |
A |
T |
X: 20,028,717 (GRCm39) |
M368K |
probably damaging |
Het |
Slx4ip |
T |
A |
2: 136,888,669 (GRCm39) |
C117S |
probably damaging |
Het |
Spata31d1d |
T |
A |
13: 59,876,509 (GRCm39) |
Q342L |
probably benign |
Het |
Spink13 |
T |
A |
18: 62,740,820 (GRCm39) |
Y93F |
probably damaging |
Het |
St6galnac5 |
A |
T |
3: 152,551,958 (GRCm39) |
I203N |
possibly damaging |
Het |
Syne2 |
T |
A |
12: 76,099,579 (GRCm39) |
C5335S |
probably damaging |
Het |
Tagap |
T |
A |
17: 8,148,742 (GRCm39) |
D173E |
probably benign |
Het |
Tekt3 |
A |
C |
11: 62,960,867 (GRCm39) |
Y12S |
probably damaging |
Het |
Tmem81 |
T |
A |
1: 132,435,321 (GRCm39) |
N42K |
probably damaging |
Het |
Ttc33 |
C |
T |
15: 5,241,579 (GRCm39) |
R135* |
probably null |
Het |
Unc5c |
A |
G |
3: 141,533,278 (GRCm39) |
D842G |
possibly damaging |
Het |
Usp43 |
A |
T |
11: 67,770,779 (GRCm39) |
H618Q |
probably damaging |
Het |
Vmn2r50 |
T |
G |
7: 9,786,915 (GRCm39) |
N64T |
possibly damaging |
Het |
Vmn2r53 |
T |
C |
7: 12,315,632 (GRCm39) |
Y729C |
probably damaging |
Het |
Vmn2r59 |
T |
A |
7: 41,695,251 (GRCm39) |
H387L |
possibly damaging |
Het |
Vstm2a |
G |
T |
11: 16,213,166 (GRCm39) |
V184F |
possibly damaging |
Het |
Wdr53 |
T |
G |
16: 32,070,935 (GRCm39) |
N93K |
probably damaging |
Het |
Wdr95 |
A |
G |
5: 149,505,351 (GRCm39) |
|
probably null |
Het |
Xpot |
A |
T |
10: 121,438,932 (GRCm39) |
|
probably null |
Het |
Xrcc5 |
C |
T |
1: 72,364,246 (GRCm39) |
Q233* |
probably null |
Het |
Zbtb18 |
T |
A |
1: 177,275,077 (GRCm39) |
C137S |
possibly damaging |
Het |
Zfp58 |
C |
A |
13: 67,639,598 (GRCm39) |
G298* |
probably null |
Het |
Zfp963 |
A |
G |
8: 70,196,100 (GRCm39) |
S118P |
possibly damaging |
Het |
Zmynd15 |
A |
T |
11: 70,353,393 (GRCm39) |
Q336L |
probably benign |
Het |
|
Other mutations in Tnc |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00229:Tnc
|
APN |
4 |
63,935,061 (GRCm39) |
splice site |
probably benign |
|
IGL00531:Tnc
|
APN |
4 |
63,889,390 (GRCm39) |
splice site |
probably benign |
|
IGL00674:Tnc
|
APN |
4 |
63,883,844 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01015:Tnc
|
APN |
4 |
63,935,571 (GRCm39) |
missense |
probably benign |
0.19 |
IGL01090:Tnc
|
APN |
4 |
63,918,317 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01310:Tnc
|
APN |
4 |
63,931,314 (GRCm39) |
missense |
probably benign |
0.03 |
IGL01331:Tnc
|
APN |
4 |
63,901,112 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01393:Tnc
|
APN |
4 |
63,932,291 (GRCm39) |
splice site |
probably benign |
|
IGL01411:Tnc
|
APN |
4 |
63,918,959 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL01472:Tnc
|
APN |
4 |
63,924,656 (GRCm39) |
missense |
probably benign |
0.00 |
IGL01552:Tnc
|
APN |
4 |
63,888,645 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01661:Tnc
|
APN |
4 |
63,888,544 (GRCm39) |
splice site |
probably benign |
|
IGL01669:Tnc
|
APN |
4 |
63,918,938 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01912:Tnc
|
APN |
4 |
63,926,977 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02028:Tnc
|
APN |
4 |
63,884,909 (GRCm39) |
splice site |
probably benign |
|
IGL02100:Tnc
|
APN |
4 |
63,918,398 (GRCm39) |
missense |
possibly damaging |
0.84 |
IGL02549:Tnc
|
APN |
4 |
63,933,309 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02642:Tnc
|
APN |
4 |
63,883,816 (GRCm39) |
splice site |
probably benign |
|
IGL02712:Tnc
|
APN |
4 |
63,893,493 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02876:Tnc
|
APN |
4 |
63,933,338 (GRCm39) |
missense |
possibly damaging |
0.56 |
IGL02886:Tnc
|
APN |
4 |
63,918,344 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL02972:Tnc
|
APN |
4 |
63,894,715 (GRCm39) |
missense |
probably benign |
0.11 |
IGL03073:Tnc
|
APN |
4 |
63,889,461 (GRCm39) |
missense |
possibly damaging |
0.58 |
IGL03116:Tnc
|
APN |
4 |
63,932,270 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03181:Tnc
|
APN |
4 |
63,885,543 (GRCm39) |
missense |
possibly damaging |
0.95 |
IGL03358:Tnc
|
APN |
4 |
63,935,852 (GRCm39) |
nonsense |
probably null |
|
tancredo
|
UTSW |
4 |
63,911,534 (GRCm39) |
nonsense |
probably null |
|
BB009:Tnc
|
UTSW |
4 |
63,926,857 (GRCm39) |
missense |
probably benign |
|
BB019:Tnc
|
UTSW |
4 |
63,926,857 (GRCm39) |
missense |
probably benign |
|
P0020:Tnc
|
UTSW |
4 |
63,927,094 (GRCm39) |
missense |
possibly damaging |
0.63 |
PIT4377001:Tnc
|
UTSW |
4 |
63,935,973 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4403001:Tnc
|
UTSW |
4 |
63,882,904 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4468001:Tnc
|
UTSW |
4 |
63,882,904 (GRCm39) |
missense |
probably damaging |
1.00 |
R0243:Tnc
|
UTSW |
4 |
63,888,657 (GRCm39) |
missense |
probably damaging |
0.98 |
R0362:Tnc
|
UTSW |
4 |
63,935,679 (GRCm39) |
missense |
probably damaging |
1.00 |
R0410:Tnc
|
UTSW |
4 |
63,925,931 (GRCm39) |
missense |
probably benign |
0.00 |
R0420:Tnc
|
UTSW |
4 |
63,918,396 (GRCm39) |
missense |
probably benign |
0.00 |
R0540:Tnc
|
UTSW |
4 |
63,938,692 (GRCm39) |
missense |
probably damaging |
1.00 |
R0650:Tnc
|
UTSW |
4 |
63,926,971 (GRCm39) |
missense |
probably benign |
0.00 |
R1019:Tnc
|
UTSW |
4 |
63,880,319 (GRCm39) |
missense |
probably damaging |
1.00 |
R1102:Tnc
|
UTSW |
4 |
63,938,705 (GRCm39) |
missense |
probably benign |
0.05 |
R1126:Tnc
|
UTSW |
4 |
63,936,357 (GRCm39) |
missense |
probably damaging |
0.99 |
R1141:Tnc
|
UTSW |
4 |
63,932,231 (GRCm39) |
missense |
probably damaging |
1.00 |
R1142:Tnc
|
UTSW |
4 |
63,932,231 (GRCm39) |
missense |
probably damaging |
1.00 |
R1307:Tnc
|
UTSW |
4 |
63,927,096 (GRCm39) |
missense |
probably damaging |
0.98 |
R1322:Tnc
|
UTSW |
4 |
63,932,231 (GRCm39) |
missense |
probably damaging |
1.00 |
R1414:Tnc
|
UTSW |
4 |
63,883,932 (GRCm39) |
splice site |
probably benign |
|
R1470:Tnc
|
UTSW |
4 |
63,884,811 (GRCm39) |
missense |
probably damaging |
1.00 |
R1470:Tnc
|
UTSW |
4 |
63,884,811 (GRCm39) |
missense |
probably damaging |
1.00 |
R1499:Tnc
|
UTSW |
4 |
63,882,991 (GRCm39) |
missense |
probably benign |
0.15 |
R1506:Tnc
|
UTSW |
4 |
63,925,921 (GRCm39) |
missense |
possibly damaging |
0.90 |
R1597:Tnc
|
UTSW |
4 |
63,924,621 (GRCm39) |
missense |
probably benign |
|
R1765:Tnc
|
UTSW |
4 |
63,932,231 (GRCm39) |
missense |
probably damaging |
1.00 |
R1783:Tnc
|
UTSW |
4 |
63,936,333 (GRCm39) |
missense |
probably damaging |
0.98 |
R1808:Tnc
|
UTSW |
4 |
63,918,168 (GRCm39) |
missense |
probably damaging |
1.00 |
R1903:Tnc
|
UTSW |
4 |
63,918,299 (GRCm39) |
missense |
probably benign |
0.00 |
R1932:Tnc
|
UTSW |
4 |
63,911,262 (GRCm39) |
critical splice donor site |
probably null |
|
R1941:Tnc
|
UTSW |
4 |
63,933,201 (GRCm39) |
missense |
probably damaging |
1.00 |
R1983:Tnc
|
UTSW |
4 |
63,902,867 (GRCm39) |
missense |
possibly damaging |
0.95 |
R2024:Tnc
|
UTSW |
4 |
63,882,858 (GRCm39) |
missense |
probably damaging |
1.00 |
R2075:Tnc
|
UTSW |
4 |
63,913,903 (GRCm39) |
missense |
possibly damaging |
0.94 |
R2327:Tnc
|
UTSW |
4 |
63,893,475 (GRCm39) |
missense |
possibly damaging |
0.78 |
R2444:Tnc
|
UTSW |
4 |
63,933,200 (GRCm39) |
missense |
probably damaging |
1.00 |
R2982:Tnc
|
UTSW |
4 |
63,938,756 (GRCm39) |
missense |
possibly damaging |
0.81 |
R3874:Tnc
|
UTSW |
4 |
63,926,947 (GRCm39) |
missense |
probably damaging |
1.00 |
R4110:Tnc
|
UTSW |
4 |
63,933,188 (GRCm39) |
missense |
probably damaging |
1.00 |
R4360:Tnc
|
UTSW |
4 |
63,935,161 (GRCm39) |
missense |
probably benign |
0.35 |
R4371:Tnc
|
UTSW |
4 |
63,888,588 (GRCm39) |
missense |
probably damaging |
1.00 |
R4434:Tnc
|
UTSW |
4 |
63,926,066 (GRCm39) |
missense |
possibly damaging |
0.91 |
R4438:Tnc
|
UTSW |
4 |
63,926,066 (GRCm39) |
missense |
possibly damaging |
0.91 |
R4570:Tnc
|
UTSW |
4 |
63,913,909 (GRCm39) |
missense |
probably damaging |
0.99 |
R4595:Tnc
|
UTSW |
4 |
63,913,982 (GRCm39) |
missense |
probably damaging |
1.00 |
R4749:Tnc
|
UTSW |
4 |
63,913,876 (GRCm39) |
missense |
possibly damaging |
0.56 |
R4756:Tnc
|
UTSW |
4 |
63,885,580 (GRCm39) |
missense |
probably damaging |
0.99 |
R4824:Tnc
|
UTSW |
4 |
63,935,857 (GRCm39) |
nonsense |
probably null |
|
R4957:Tnc
|
UTSW |
4 |
63,894,793 (GRCm39) |
missense |
probably damaging |
1.00 |
R4977:Tnc
|
UTSW |
4 |
63,924,485 (GRCm39) |
missense |
possibly damaging |
0.82 |
R5001:Tnc
|
UTSW |
4 |
63,918,299 (GRCm39) |
missense |
probably benign |
0.16 |
R5001:Tnc
|
UTSW |
4 |
63,902,726 (GRCm39) |
missense |
probably damaging |
1.00 |
R5015:Tnc
|
UTSW |
4 |
63,924,739 (GRCm39) |
missense |
probably damaging |
1.00 |
R5049:Tnc
|
UTSW |
4 |
63,936,223 (GRCm39) |
missense |
probably damaging |
1.00 |
R5066:Tnc
|
UTSW |
4 |
63,893,466 (GRCm39) |
missense |
probably damaging |
0.96 |
R5073:Tnc
|
UTSW |
4 |
63,938,648 (GRCm39) |
missense |
probably damaging |
1.00 |
R5116:Tnc
|
UTSW |
4 |
63,885,452 (GRCm39) |
critical splice donor site |
probably null |
|
R5195:Tnc
|
UTSW |
4 |
63,885,489 (GRCm39) |
missense |
probably damaging |
1.00 |
R5200:Tnc
|
UTSW |
4 |
63,889,515 (GRCm39) |
missense |
probably damaging |
1.00 |
R5221:Tnc
|
UTSW |
4 |
63,911,534 (GRCm39) |
nonsense |
probably null |
|
R5237:Tnc
|
UTSW |
4 |
63,880,333 (GRCm39) |
missense |
probably damaging |
1.00 |
R5265:Tnc
|
UTSW |
4 |
63,911,443 (GRCm39) |
missense |
probably benign |
0.00 |
R5275:Tnc
|
UTSW |
4 |
63,882,967 (GRCm39) |
nonsense |
probably null |
|
R5346:Tnc
|
UTSW |
4 |
63,926,892 (GRCm39) |
missense |
probably benign |
|
R5409:Tnc
|
UTSW |
4 |
63,925,654 (GRCm39) |
missense |
probably damaging |
1.00 |
R5409:Tnc
|
UTSW |
4 |
63,884,773 (GRCm39) |
missense |
probably damaging |
1.00 |
R5469:Tnc
|
UTSW |
4 |
63,932,162 (GRCm39) |
splice site |
probably null |
|
R5518:Tnc
|
UTSW |
4 |
63,935,916 (GRCm39) |
missense |
probably damaging |
1.00 |
R5560:Tnc
|
UTSW |
4 |
63,926,946 (GRCm39) |
missense |
probably damaging |
1.00 |
R5588:Tnc
|
UTSW |
4 |
63,924,659 (GRCm39) |
missense |
possibly damaging |
0.57 |
R5686:Tnc
|
UTSW |
4 |
63,925,967 (GRCm39) |
splice site |
probably null |
|
R5686:Tnc
|
UTSW |
4 |
63,927,032 (GRCm39) |
missense |
possibly damaging |
0.78 |
R5837:Tnc
|
UTSW |
4 |
63,931,451 (GRCm39) |
missense |
probably damaging |
1.00 |
R5976:Tnc
|
UTSW |
4 |
63,936,403 (GRCm39) |
missense |
probably benign |
0.17 |
R6156:Tnc
|
UTSW |
4 |
63,888,589 (GRCm39) |
missense |
probably damaging |
1.00 |
R6182:Tnc
|
UTSW |
4 |
63,927,033 (GRCm39) |
missense |
probably damaging |
0.99 |
R6360:Tnc
|
UTSW |
4 |
63,918,970 (GRCm39) |
missense |
probably damaging |
1.00 |
R6416:Tnc
|
UTSW |
4 |
63,926,053 (GRCm39) |
missense |
probably benign |
0.05 |
R6778:Tnc
|
UTSW |
4 |
63,913,835 (GRCm39) |
missense |
probably benign |
0.12 |
R6798:Tnc
|
UTSW |
4 |
63,883,841 (GRCm39) |
missense |
probably benign |
0.02 |
R6799:Tnc
|
UTSW |
4 |
63,883,841 (GRCm39) |
missense |
probably benign |
0.02 |
R6943:Tnc
|
UTSW |
4 |
63,900,982 (GRCm39) |
missense |
probably damaging |
0.97 |
R7027:Tnc
|
UTSW |
4 |
63,902,826 (GRCm39) |
missense |
probably benign |
0.02 |
R7183:Tnc
|
UTSW |
4 |
63,931,365 (GRCm39) |
missense |
probably damaging |
1.00 |
R7204:Tnc
|
UTSW |
4 |
63,889,392 (GRCm39) |
splice site |
probably null |
|
R7317:Tnc
|
UTSW |
4 |
63,890,959 (GRCm39) |
missense |
probably damaging |
0.99 |
R7323:Tnc
|
UTSW |
4 |
63,889,469 (GRCm39) |
missense |
probably damaging |
0.96 |
R7327:Tnc
|
UTSW |
4 |
63,882,999 (GRCm39) |
splice site |
probably null |
|
R7382:Tnc
|
UTSW |
4 |
63,932,280 (GRCm39) |
nonsense |
probably null |
|
R7399:Tnc
|
UTSW |
4 |
63,938,894 (GRCm39) |
start gained |
probably benign |
|
R7479:Tnc
|
UTSW |
4 |
63,935,865 (GRCm39) |
missense |
possibly damaging |
0.95 |
R7585:Tnc
|
UTSW |
4 |
63,938,648 (GRCm39) |
missense |
probably damaging |
1.00 |
R7932:Tnc
|
UTSW |
4 |
63,926,857 (GRCm39) |
missense |
probably benign |
|
R7947:Tnc
|
UTSW |
4 |
63,935,580 (GRCm39) |
missense |
probably damaging |
1.00 |
R7974:Tnc
|
UTSW |
4 |
63,918,961 (GRCm39) |
missense |
possibly damaging |
0.84 |
R7991:Tnc
|
UTSW |
4 |
63,926,983 (GRCm39) |
missense |
probably benign |
0.42 |
R8004:Tnc
|
UTSW |
4 |
63,902,894 (GRCm39) |
missense |
probably benign |
0.04 |
R8080:Tnc
|
UTSW |
4 |
63,894,706 (GRCm39) |
missense |
possibly damaging |
0.52 |
R8109:Tnc
|
UTSW |
4 |
63,927,000 (GRCm39) |
missense |
probably benign |
0.11 |
R8145:Tnc
|
UTSW |
4 |
63,935,716 (GRCm39) |
missense |
probably benign |
|
R8340:Tnc
|
UTSW |
4 |
63,926,036 (GRCm39) |
missense |
probably damaging |
1.00 |
R8360:Tnc
|
UTSW |
4 |
63,885,511 (GRCm39) |
missense |
probably benign |
0.00 |
R8671:Tnc
|
UTSW |
4 |
63,935,683 (GRCm39) |
missense |
probably damaging |
1.00 |
R8691:Tnc
|
UTSW |
4 |
63,880,313 (GRCm39) |
missense |
probably damaging |
1.00 |
R8759:Tnc
|
UTSW |
4 |
63,924,501 (GRCm39) |
missense |
possibly damaging |
0.86 |
R8864:Tnc
|
UTSW |
4 |
63,911,296 (GRCm39) |
missense |
probably damaging |
0.98 |
R8927:Tnc
|
UTSW |
4 |
63,925,595 (GRCm39) |
missense |
probably damaging |
1.00 |
R8928:Tnc
|
UTSW |
4 |
63,925,595 (GRCm39) |
missense |
probably damaging |
1.00 |
R8949:Tnc
|
UTSW |
4 |
63,927,087 (GRCm39) |
missense |
probably damaging |
1.00 |
R8956:Tnc
|
UTSW |
4 |
63,918,970 (GRCm39) |
missense |
probably damaging |
1.00 |
R9016:Tnc
|
UTSW |
4 |
63,935,331 (GRCm39) |
missense |
probably benign |
0.23 |
R9049:Tnc
|
UTSW |
4 |
63,918,247 (GRCm39) |
missense |
possibly damaging |
0.83 |
R9097:Tnc
|
UTSW |
4 |
63,888,622 (GRCm39) |
missense |
possibly damaging |
0.62 |
R9114:Tnc
|
UTSW |
4 |
63,890,973 (GRCm39) |
missense |
probably benign |
0.03 |
R9151:Tnc
|
UTSW |
4 |
63,938,686 (GRCm39) |
missense |
possibly damaging |
0.46 |
R9488:Tnc
|
UTSW |
4 |
63,913,942 (GRCm39) |
missense |
probably damaging |
0.99 |
R9537:Tnc
|
UTSW |
4 |
63,884,821 (GRCm39) |
missense |
probably damaging |
0.99 |
R9666:Tnc
|
UTSW |
4 |
63,926,045 (GRCm39) |
missense |
probably damaging |
1.00 |
R9700:Tnc
|
UTSW |
4 |
63,933,186 (GRCm39) |
missense |
probably damaging |
0.99 |
R9703:Tnc
|
UTSW |
4 |
63,889,412 (GRCm39) |
missense |
probably benign |
0.00 |
R9771:Tnc
|
UTSW |
4 |
63,925,600 (GRCm39) |
missense |
probably damaging |
1.00 |
S24628:Tnc
|
UTSW |
4 |
63,936,249 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1177:Tnc
|
UTSW |
4 |
63,925,663 (GRCm39) |
nonsense |
probably null |
|
Z1177:Tnc
|
UTSW |
4 |
63,878,781 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
Predicted Primers |
PCR Primer
(F):5'- AAGACATGACTGGCTCTTACAGCG -3'
(R):5'- AGGCAGTAGTGACCATACAGGTCTC -3'
Sequencing Primer
(F):5'- GCTCTTACAGCGTACCACTGAG -3'
(R):5'- ccaggattatcatgcccattttac -3'
|
Posted On |
2014-05-23 |