Incidental Mutation 'R0090:Ptpn13'
| ID |
20133 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Ptpn13
|
| Ensembl Gene |
ENSMUSG00000034573 |
| Gene Name |
protein tyrosine phosphatase, non-receptor type 13 |
| Synonyms |
PTPL1, PTP-BL, Ptpri |
| MMRRC Submission |
038377-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.235)
|
| Stock # |
R0090 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
(trace)
|
| Chromosome |
5 |
| Chromosomal Location |
103573058-103746169 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 103717369 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Valine to Alanine
at position 1837
(V1837A)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000048119
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000048957]
|
| AlphaFold |
no structure available at present |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000048957
AA Change: V1837A
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000048119
Gene: ENSMUSG00000034573
AA Change: V1837A
| Domain | Start | End | E-Value | Type |
|---|
|
KIND
|
3 |
190 |
2.3e-80 |
SMART |
|
Blast:B41
|
340 |
447 |
6e-34 |
BLAST |
|
coiled coil region
|
460 |
487 |
N/A |
INTRINSIC |
|
B41
|
561 |
774 |
3.3e-68 |
SMART |
|
FERM_C
|
780 |
869 |
3.2e-35 |
SMART |
|
low complexity region
|
1049 |
1058 |
N/A |
INTRINSIC |
|
PDZ
|
1093 |
1170 |
7.6e-25 |
SMART |
|
low complexity region
|
1224 |
1236 |
N/A |
INTRINSIC |
|
low complexity region
|
1309 |
1322 |
N/A |
INTRINSIC |
|
low complexity region
|
1331 |
1341 |
N/A |
INTRINSIC |
|
PDZ
|
1365 |
1442 |
1.7e-24 |
SMART |
|
low complexity region
|
1450 |
1468 |
N/A |
INTRINSIC |
|
PDZ
|
1499 |
1579 |
3.5e-19 |
SMART |
|
PDZ
|
1773 |
1845 |
1.2e-21 |
SMART |
|
PDZ
|
1867 |
1942 |
1.6e-16 |
SMART |
|
low complexity region
|
2123 |
2134 |
N/A |
INTRINSIC |
|
PTPc
|
2179 |
2436 |
6.9e-113 |
SMART |
|
| Meta Mutation Damage Score |
0.5301 |
| Coding Region Coverage |
- 1x: 98.9%
- 3x: 98.0%
- 10x: 95.7%
- 20x: 91.4%
|
| Validation Efficiency |
99% (90/91) |
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic transformation. This PTP is a large intracellular protein. It has a catalytic PTP domain at its C-terminus and two major structural domains: a region with five PDZ domains and a FERM domain that binds to plasma membrane and cytoskeletal elements. This PTP was found to interact with, and dephosphorylate, Fas receptor and IkappaBalpha through the PDZ domains. This suggests it has a role in Fas mediated programmed cell death. This PTP was also shown to interact with GTPase-activating protein, and thus may function as a regulator of Rho signaling pathways. Four alternatively spliced transcript variants, which encode distinct proteins, have been reported. [provided by RefSeq, Oct 2008]
PHENOTYPE: Mice homozygous for a null allele exhibit abnormal T-helper cell differentiation. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 89 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 2010315B03Rik |
T |
C |
9: 124,057,789 (GRCm39) |
|
probably benign |
Het |
| 4933427I04Rik |
A |
G |
4: 123,754,775 (GRCm39) |
T230A |
possibly damaging |
Het |
| Acsm1 |
T |
C |
7: 119,261,412 (GRCm39) |
|
probably benign |
Het |
| Acta1 |
T |
C |
8: 124,620,396 (GRCm39) |
N14S |
probably damaging |
Het |
| Aff4 |
A |
G |
11: 53,283,609 (GRCm39) |
T362A |
probably benign |
Het |
| Aggf1 |
A |
G |
13: 95,501,467 (GRCm39) |
I305T |
probably benign |
Het |
| Ap4b1 |
A |
G |
3: 103,727,745 (GRCm39) |
D325G |
possibly damaging |
Het |
| Ap4e1 |
C |
T |
2: 126,906,905 (GRCm39) |
T1055I |
possibly damaging |
Het |
| Arhgef2 |
A |
T |
3: 88,546,655 (GRCm39) |
Q496L |
probably damaging |
Het |
| Arhgef28 |
A |
G |
13: 98,211,618 (GRCm39) |
F122L |
probably damaging |
Het |
| Baiap3 |
G |
A |
17: 25,469,044 (GRCm39) |
|
probably benign |
Het |
| Casp8ap2 |
T |
A |
4: 32,640,327 (GRCm39) |
H460Q |
probably damaging |
Het |
| Casz1 |
A |
G |
4: 149,017,868 (GRCm39) |
T386A |
probably benign |
Het |
| Cd53 |
A |
T |
3: 106,674,725 (GRCm39) |
V114E |
possibly damaging |
Het |
| Celsr2 |
A |
G |
3: 108,300,643 (GRCm39) |
|
probably benign |
Het |
| Cfap300 |
T |
A |
9: 8,027,184 (GRCm39) |
N118I |
probably benign |
Het |
| Chaf1b |
G |
T |
16: 93,684,012 (GRCm39) |
A88S |
possibly damaging |
Het |
| Cldn10 |
A |
T |
14: 119,111,612 (GRCm39) |
Y194F |
probably damaging |
Het |
| Clec2e |
A |
C |
6: 129,072,181 (GRCm39) |
|
probably null |
Het |
| Cmpk2 |
A |
T |
12: 26,528,021 (GRCm39) |
T413S |
probably benign |
Het |
| Col9a1 |
T |
A |
1: 24,262,643 (GRCm39) |
|
probably null |
Het |
| Dchs1 |
G |
T |
7: 105,405,139 (GRCm39) |
Q2468K |
probably benign |
Het |
| Ddx60 |
A |
G |
8: 62,395,327 (GRCm39) |
D88G |
probably damaging |
Het |
| Dnah8 |
A |
G |
17: 31,003,064 (GRCm39) |
R3588G |
probably benign |
Het |
| Ect2 |
T |
C |
3: 27,169,625 (GRCm39) |
T774A |
probably benign |
Het |
| Ect2 |
C |
T |
3: 27,192,651 (GRCm39) |
E431K |
probably null |
Het |
| Ern1 |
A |
G |
11: 106,296,649 (GRCm39) |
V767A |
probably damaging |
Het |
| Fbln1 |
A |
C |
15: 85,108,489 (GRCm39) |
E75A |
possibly damaging |
Het |
| Fgf5 |
C |
T |
5: 98,409,846 (GRCm39) |
R132* |
probably null |
Het |
| Folh1 |
T |
C |
7: 86,375,076 (GRCm39) |
|
probably benign |
Het |
| Gdf15 |
A |
T |
8: 71,082,334 (GRCm39) |
H257Q |
probably damaging |
Het |
| Ghitm |
T |
C |
14: 36,844,176 (GRCm39) |
T322A |
probably benign |
Het |
| Gm5709 |
A |
G |
3: 59,526,192 (GRCm39) |
|
noncoding transcript |
Het |
| Hbb-y |
C |
T |
7: 103,501,950 (GRCm39) |
|
probably null |
Het |
| Hmcn2 |
A |
T |
2: 31,316,210 (GRCm39) |
D3771V |
probably damaging |
Het |
| Hspa12a |
T |
C |
19: 58,787,941 (GRCm39) |
D627G |
probably benign |
Het |
| Idh2 |
T |
C |
7: 79,747,662 (GRCm39) |
E286G |
probably damaging |
Het |
| Idh3b |
C |
A |
2: 130,122,899 (GRCm39) |
A297S |
probably benign |
Het |
| Igsf3 |
A |
G |
3: 101,342,968 (GRCm39) |
E535G |
probably damaging |
Het |
| Ilf3 |
T |
A |
9: 21,306,710 (GRCm39) |
D314E |
probably damaging |
Het |
| Itgb8 |
A |
G |
12: 119,166,298 (GRCm39) |
S78P |
probably benign |
Het |
| Itih5 |
G |
A |
2: 10,169,495 (GRCm39) |
V31I |
probably benign |
Het |
| Kcnj2 |
T |
C |
11: 110,963,853 (GRCm39) |
V415A |
probably benign |
Het |
| Kin |
A |
G |
2: 10,090,584 (GRCm39) |
Q53R |
possibly damaging |
Het |
| Krt78 |
A |
T |
15: 101,856,272 (GRCm39) |
M513K |
probably benign |
Het |
| Krtap4-8 |
A |
T |
11: 99,671,312 (GRCm39) |
|
probably benign |
Het |
| Ltbr |
T |
C |
6: 125,286,412 (GRCm39) |
|
probably benign |
Het |
| Mgat4a |
G |
A |
1: 37,529,414 (GRCm39) |
T146I |
probably damaging |
Het |
| Mrps2 |
G |
C |
2: 28,358,268 (GRCm39) |
W19C |
probably damaging |
Het |
| Mthfs |
T |
C |
9: 89,093,344 (GRCm39) |
S33P |
probably damaging |
Het |
| Myh6 |
T |
C |
14: 55,196,161 (GRCm39) |
D546G |
probably damaging |
Het |
| Nanos3 |
C |
T |
8: 84,902,763 (GRCm39) |
R133Q |
probably damaging |
Het |
| Ndst2 |
T |
C |
14: 20,777,335 (GRCm39) |
T553A |
probably damaging |
Het |
| Nlrp12 |
T |
C |
7: 3,288,664 (GRCm39) |
E616G |
probably damaging |
Het |
| Nrde2 |
T |
C |
12: 100,095,545 (GRCm39) |
|
probably benign |
Het |
| Nup210l |
G |
A |
3: 90,119,086 (GRCm39) |
V1832I |
probably benign |
Het |
| Or1e1c |
G |
A |
11: 73,266,402 (GRCm39) |
V276I |
probably benign |
Het |
| Or4k77 |
A |
T |
2: 111,199,639 (GRCm39) |
I221F |
probably damaging |
Het |
| Pcm1 |
A |
T |
8: 41,709,078 (GRCm39) |
E9D |
probably damaging |
Het |
| Pear1 |
A |
T |
3: 87,661,649 (GRCm39) |
D541E |
possibly damaging |
Het |
| Peg10 |
A |
G |
6: 4,756,063 (GRCm39) |
|
probably benign |
Het |
| Prss1 |
G |
A |
6: 41,438,166 (GRCm39) |
R31Q |
probably benign |
Het |
| Rasgrp3 |
A |
G |
17: 75,805,456 (GRCm39) |
D149G |
probably damaging |
Het |
| Reg3d |
A |
T |
6: 78,355,466 (GRCm39) |
H8Q |
possibly damaging |
Het |
| Rhox4f |
A |
C |
X: 36,789,122 (GRCm39) |
V15G |
probably benign |
Het |
| Sacs |
T |
A |
14: 61,442,889 (GRCm39) |
L1645H |
probably damaging |
Het |
| Slc16a5 |
A |
T |
11: 115,355,751 (GRCm39) |
S71C |
probably damaging |
Het |
| Slc9a3 |
A |
G |
13: 74,306,847 (GRCm39) |
E324G |
probably damaging |
Het |
| Smgc |
T |
C |
15: 91,743,960 (GRCm39) |
V574A |
possibly damaging |
Het |
| Stac3 |
C |
T |
10: 127,339,799 (GRCm39) |
|
probably benign |
Het |
| Supv3l1 |
A |
G |
10: 62,265,485 (GRCm39) |
L685P |
probably benign |
Het |
| Taar2 |
G |
A |
10: 23,817,393 (GRCm39) |
R311H |
probably benign |
Het |
| Tas2r125 |
G |
T |
6: 132,887,361 (GRCm39) |
A250S |
probably benign |
Het |
| Tdrd6 |
C |
T |
17: 43,939,132 (GRCm39) |
V639I |
probably benign |
Het |
| Thap12 |
T |
G |
7: 98,365,100 (GRCm39) |
W423G |
probably damaging |
Het |
| Tmem245 |
T |
C |
4: 56,899,410 (GRCm39) |
I217V |
probably benign |
Het |
| Trip12 |
T |
A |
1: 84,709,857 (GRCm39) |
|
probably benign |
Het |
| Tshz3 |
T |
C |
7: 36,468,317 (GRCm39) |
V102A |
probably benign |
Het |
| Ubap1 |
T |
C |
4: 41,379,826 (GRCm39) |
S347P |
probably damaging |
Het |
| Usp10 |
C |
T |
8: 120,679,935 (GRCm39) |
Q612* |
probably null |
Het |
| Vmn2r72 |
T |
C |
7: 85,404,084 (GRCm39) |
I36V |
probably benign |
Het |
| Vps37a |
T |
C |
8: 40,980,030 (GRCm39) |
I63T |
possibly damaging |
Het |
| Whrn |
C |
A |
4: 63,350,969 (GRCm39) |
R9L |
possibly damaging |
Het |
| Xrcc1 |
T |
C |
7: 24,269,642 (GRCm39) |
Y401H |
probably damaging |
Het |
| Ylpm1 |
GCCTAAGCAGCAACCTAAG |
GCCTAAG |
12: 85,075,814 (GRCm39) |
|
probably benign |
Het |
| Zfhx3 |
G |
A |
8: 109,676,689 (GRCm39) |
D2580N |
possibly damaging |
Het |
| Zfhx4 |
A |
G |
3: 5,308,685 (GRCm39) |
N637S |
probably damaging |
Het |
| Zfp268 |
A |
T |
4: 145,349,195 (GRCm39) |
K211* |
probably null |
Het |
| Zyg11a |
A |
T |
4: 108,058,544 (GRCm39) |
|
probably benign |
Het |
|
| Other mutations in Ptpn13 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00340:Ptpn13
|
APN |
5 |
103,698,924 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL00569:Ptpn13
|
APN |
5 |
103,738,872 (GRCm39) |
splice site |
probably benign |
|
|
IGL00764:Ptpn13
|
APN |
5 |
103,745,584 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL00805:Ptpn13
|
APN |
5 |
103,702,595 (GRCm39) |
missense |
probably benign |
0.33 |
|
IGL00922:Ptpn13
|
APN |
5 |
103,735,954 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL00959:Ptpn13
|
APN |
5 |
103,665,437 (GRCm39) |
critical splice donor site |
probably null |
|
|
IGL01090:Ptpn13
|
APN |
5 |
103,689,180 (GRCm39) |
missense |
probably null |
0.80 |
|
IGL01352:Ptpn13
|
APN |
5 |
103,634,641 (GRCm39) |
splice site |
probably null |
|
|
IGL01510:Ptpn13
|
APN |
5 |
103,710,166 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01515:Ptpn13
|
APN |
5 |
103,703,979 (GRCm39) |
missense |
probably benign |
0.06 |
|
IGL01896:Ptpn13
|
APN |
5 |
103,649,389 (GRCm39) |
missense |
possibly damaging |
0.78 |
|
IGL02094:Ptpn13
|
APN |
5 |
103,742,483 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02561:Ptpn13
|
APN |
5 |
103,710,157 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02562:Ptpn13
|
APN |
5 |
103,710,157 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02567:Ptpn13
|
APN |
5 |
103,710,157 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02604:Ptpn13
|
APN |
5 |
103,649,769 (GRCm39) |
missense |
probably benign |
0.01 |
|
IGL02679:Ptpn13
|
APN |
5 |
103,717,320 (GRCm39) |
missense |
possibly damaging |
0.55 |
|
IGL02981:Ptpn13
|
APN |
5 |
103,676,670 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03131:Ptpn13
|
APN |
5 |
103,665,425 (GRCm39) |
missense |
probably benign |
|
|
IGL03136:Ptpn13
|
APN |
5 |
103,691,329 (GRCm39) |
missense |
possibly damaging |
0.49 |
|
IGL03163:Ptpn13
|
APN |
5 |
103,739,212 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03271:Ptpn13
|
APN |
5 |
103,610,014 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03297:Ptpn13
|
APN |
5 |
103,688,943 (GRCm39) |
missense |
probably benign |
0.13 |
|
IGL03328:Ptpn13
|
APN |
5 |
103,664,214 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL03343:Ptpn13
|
APN |
5 |
103,702,816 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
IGL02835:Ptpn13
|
UTSW |
5 |
103,707,891 (GRCm39) |
missense |
probably damaging |
0.98 |
|
P0021:Ptpn13
|
UTSW |
5 |
103,676,686 (GRCm39) |
missense |
probably benign |
0.39 |
|
R0017:Ptpn13
|
UTSW |
5 |
103,634,638 (GRCm39) |
critical splice donor site |
probably null |
|
|
R0111:Ptpn13
|
UTSW |
5 |
103,728,629 (GRCm39) |
splice site |
probably benign |
|
|
R0183:Ptpn13
|
UTSW |
5 |
103,664,274 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0230:Ptpn13
|
UTSW |
5 |
103,674,997 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0302:Ptpn13
|
UTSW |
5 |
103,713,091 (GRCm39) |
missense |
probably benign |
|
|
R0360:Ptpn13
|
UTSW |
5 |
103,681,214 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0364:Ptpn13
|
UTSW |
5 |
103,681,214 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0388:Ptpn13
|
UTSW |
5 |
103,702,928 (GRCm39) |
missense |
probably benign |
0.31 |
|
R0504:Ptpn13
|
UTSW |
5 |
103,649,362 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R0558:Ptpn13
|
UTSW |
5 |
103,677,583 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R0562:Ptpn13
|
UTSW |
5 |
103,664,291 (GRCm39) |
critical splice donor site |
probably null |
|
|
R0568:Ptpn13
|
UTSW |
5 |
103,637,631 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0609:Ptpn13
|
UTSW |
5 |
103,704,011 (GRCm39) |
missense |
probably benign |
|
|
R0669:Ptpn13
|
UTSW |
5 |
103,703,975 (GRCm39) |
missense |
probably benign |
|
|
R0739:Ptpn13
|
UTSW |
5 |
103,722,998 (GRCm39) |
missense |
probably benign |
|
|
R1006:Ptpn13
|
UTSW |
5 |
103,734,655 (GRCm39) |
missense |
probably benign |
0.04 |
|
R1164:Ptpn13
|
UTSW |
5 |
103,637,639 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1274:Ptpn13
|
UTSW |
5 |
103,698,126 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R1501:Ptpn13
|
UTSW |
5 |
103,664,230 (GRCm39) |
missense |
probably benign |
0.01 |
|
R1529:Ptpn13
|
UTSW |
5 |
103,711,998 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1533:Ptpn13
|
UTSW |
5 |
103,704,044 (GRCm39) |
nonsense |
probably null |
|
|
R1613:Ptpn13
|
UTSW |
5 |
103,684,737 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
R1616:Ptpn13
|
UTSW |
5 |
103,713,103 (GRCm39) |
missense |
possibly damaging |
0.49 |
|
R1830:Ptpn13
|
UTSW |
5 |
103,691,325 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1892:Ptpn13
|
UTSW |
5 |
103,649,545 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R1907:Ptpn13
|
UTSW |
5 |
103,728,575 (GRCm39) |
missense |
probably null |
0.45 |
|
R2143:Ptpn13
|
UTSW |
5 |
103,703,999 (GRCm39) |
missense |
probably benign |
|
|
R2145:Ptpn13
|
UTSW |
5 |
103,703,999 (GRCm39) |
missense |
probably benign |
|
|
R2151:Ptpn13
|
UTSW |
5 |
103,673,651 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2180:Ptpn13
|
UTSW |
5 |
103,717,424 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2264:Ptpn13
|
UTSW |
5 |
103,637,527 (GRCm39) |
missense |
possibly damaging |
0.96 |
|
R2313:Ptpn13
|
UTSW |
5 |
103,712,027 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3522:Ptpn13
|
UTSW |
5 |
103,737,720 (GRCm39) |
splice site |
probably benign |
|
|
R3773:Ptpn13
|
UTSW |
5 |
103,624,987 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3924:Ptpn13
|
UTSW |
5 |
103,698,607 (GRCm39) |
splice site |
probably benign |
|
|
R4289:Ptpn13
|
UTSW |
5 |
103,681,151 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4348:Ptpn13
|
UTSW |
5 |
103,717,592 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4385:Ptpn13
|
UTSW |
5 |
103,681,273 (GRCm39) |
splice site |
probably null |
|
|
R4526:Ptpn13
|
UTSW |
5 |
103,649,335 (GRCm39) |
missense |
probably benign |
0.32 |
|
R4557:Ptpn13
|
UTSW |
5 |
103,688,976 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4596:Ptpn13
|
UTSW |
5 |
103,671,558 (GRCm39) |
missense |
probably benign |
0.06 |
|
R4632:Ptpn13
|
UTSW |
5 |
103,717,726 (GRCm39) |
missense |
possibly damaging |
0.46 |
|
R4727:Ptpn13
|
UTSW |
5 |
103,717,721 (GRCm39) |
missense |
probably benign |
|
|
R4780:Ptpn13
|
UTSW |
5 |
103,734,639 (GRCm39) |
missense |
probably benign |
0.04 |
|
R4793:Ptpn13
|
UTSW |
5 |
103,730,644 (GRCm39) |
critical splice donor site |
probably null |
|
|
R4812:Ptpn13
|
UTSW |
5 |
103,671,481 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4939:Ptpn13
|
UTSW |
5 |
103,665,335 (GRCm39) |
splice site |
probably null |
|
|
R4951:Ptpn13
|
UTSW |
5 |
103,735,912 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5052:Ptpn13
|
UTSW |
5 |
103,709,846 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5148:Ptpn13
|
UTSW |
5 |
103,640,098 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5309:Ptpn13
|
UTSW |
5 |
103,688,919 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5521:Ptpn13
|
UTSW |
5 |
103,649,294 (GRCm39) |
missense |
probably benign |
0.03 |
|
R5545:Ptpn13
|
UTSW |
5 |
103,709,830 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5696:Ptpn13
|
UTSW |
5 |
103,702,625 (GRCm39) |
missense |
probably benign |
0.20 |
|
R5735:Ptpn13
|
UTSW |
5 |
103,702,686 (GRCm39) |
missense |
probably benign |
0.03 |
|
R5815:Ptpn13
|
UTSW |
5 |
103,745,556 (GRCm39) |
splice site |
probably null |
|
|
R5876:Ptpn13
|
UTSW |
5 |
103,624,826 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5878:Ptpn13
|
UTSW |
5 |
103,624,984 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
R6366:Ptpn13
|
UTSW |
5 |
103,698,919 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6455:Ptpn13
|
UTSW |
5 |
103,689,150 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6492:Ptpn13
|
UTSW |
5 |
103,649,478 (GRCm39) |
missense |
probably benign |
0.02 |
|
R6709:Ptpn13
|
UTSW |
5 |
103,734,622 (GRCm39) |
missense |
probably benign |
0.18 |
|
R6759:Ptpn13
|
UTSW |
5 |
103,713,121 (GRCm39) |
missense |
possibly damaging |
0.49 |
|
R6944:Ptpn13
|
UTSW |
5 |
103,624,857 (GRCm39) |
missense |
probably null |
1.00 |
|
R7079:Ptpn13
|
UTSW |
5 |
103,649,752 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7253:Ptpn13
|
UTSW |
5 |
103,713,150 (GRCm39) |
missense |
possibly damaging |
0.68 |
|
R7254:Ptpn13
|
UTSW |
5 |
103,742,502 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7391:Ptpn13
|
UTSW |
5 |
103,688,847 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7451:Ptpn13
|
UTSW |
5 |
103,674,961 (GRCm39) |
missense |
probably benign |
0.16 |
|
R7614:Ptpn13
|
UTSW |
5 |
103,649,331 (GRCm39) |
missense |
probably benign |
0.13 |
|
R7652:Ptpn13
|
UTSW |
5 |
103,677,578 (GRCm39) |
missense |
probably benign |
0.12 |
|
R7655:Ptpn13
|
UTSW |
5 |
103,688,849 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7656:Ptpn13
|
UTSW |
5 |
103,688,849 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7683:Ptpn13
|
UTSW |
5 |
103,713,018 (GRCm39) |
missense |
probably benign |
0.01 |
|
R7734:Ptpn13
|
UTSW |
5 |
103,709,828 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7794:Ptpn13
|
UTSW |
5 |
103,640,090 (GRCm39) |
missense |
probably benign |
0.06 |
|
R7834:Ptpn13
|
UTSW |
5 |
103,610,014 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7911:Ptpn13
|
UTSW |
5 |
103,688,924 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8010:Ptpn13
|
UTSW |
5 |
103,707,803 (GRCm39) |
nonsense |
probably null |
|
|
R8308:Ptpn13
|
UTSW |
5 |
103,688,838 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8493:Ptpn13
|
UTSW |
5 |
103,717,671 (GRCm39) |
missense |
probably benign |
0.01 |
|
R8493:Ptpn13
|
UTSW |
5 |
103,712,031 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8507:Ptpn13
|
UTSW |
5 |
103,705,815 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8556:Ptpn13
|
UTSW |
5 |
103,707,038 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8924:Ptpn13
|
UTSW |
5 |
103,739,101 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8933:Ptpn13
|
UTSW |
5 |
103,727,671 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8958:Ptpn13
|
UTSW |
5 |
103,698,973 (GRCm39) |
missense |
probably benign |
0.15 |
|
R8975:Ptpn13
|
UTSW |
5 |
103,649,266 (GRCm39) |
missense |
probably benign |
0.32 |
|
R9080:Ptpn13
|
UTSW |
5 |
103,637,494 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9091:Ptpn13
|
UTSW |
5 |
103,649,735 (GRCm39) |
missense |
possibly damaging |
0.67 |
|
R9219:Ptpn13
|
UTSW |
5 |
103,745,632 (GRCm39) |
missense |
probably benign |
0.16 |
|
R9270:Ptpn13
|
UTSW |
5 |
103,649,735 (GRCm39) |
missense |
possibly damaging |
0.67 |
|
R9577:Ptpn13
|
UTSW |
5 |
103,676,675 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9593:Ptpn13
|
UTSW |
5 |
103,674,998 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R9705:Ptpn13
|
UTSW |
5 |
103,681,221 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
RF017:Ptpn13
|
UTSW |
5 |
103,741,446 (GRCm39) |
missense |
probably benign |
0.45 |
|
Z1177:Ptpn13
|
UTSW |
5 |
103,717,422 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- ATCTCAGGTCCATGAGACAGCCAG -3'
(R):5'- CCTTGACCTCCAGACAGGGAAAATC -3'
Sequencing Primer
(F):5'- CATGAGACAGCCAGTTTCTTAC -3'
(R):5'- TCCAGACAGGGAAAATCCTTCAAAG -3'
|
| Posted On |
2013-04-11 |
Incidental Mutation