Incidental Mutation 'R1789:Kif27'
ID 201654
Institutional Source Beutler Lab
Gene Symbol Kif27
Ensembl Gene ENSMUSG00000060176
Gene Name kinesin family member 27
Synonyms 4930517I18Rik
MMRRC Submission 039820-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.159) question?
Stock # R1789 (G1)
Quality Score 225
Status Not validated
Chromosome 13
Chromosomal Location 58435316-58506936 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 58491822 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Leucine to Proline at position 439 (L439P)
Ref Sequence ENSEMBL: ENSMUSP00000153598 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000043605] [ENSMUST00000224694] [ENSMUST00000225388]
AlphaFold Q7M6Z4
Predicted Effect probably damaging
Transcript: ENSMUST00000043605
AA Change: L439P

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000043304
Gene: ENSMUSG00000060176
AA Change: L439P

DomainStartEndE-ValueType
KISc 3 349 9.18e-160 SMART
low complexity region 369 385 N/A INTRINSIC
coiled coil region 386 418 N/A INTRINSIC
Blast:KISc 486 566 5e-29 BLAST
coiled coil region 710 790 N/A INTRINSIC
coiled coil region 835 891 N/A INTRINSIC
coiled coil region 916 972 N/A INTRINSIC
low complexity region 993 1008 N/A INTRINSIC
coiled coil region 1010 1078 N/A INTRINSIC
coiled coil region 1186 1226 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000224694
Predicted Effect probably damaging
Transcript: ENSMUST00000225388
AA Change: L439P

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
Coding Region Coverage
  • 1x: 97.4%
  • 3x: 96.8%
  • 10x: 95.2%
  • 20x: 92.1%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene is a member of the KIF27 (kinesin 4) sub-family of the mammalian kinesin family. The gene is an ortholog of the Drosophila Cos2 gene, which plays an important role in the Hedgehog signaling pathway. The encoded protein contains an N-terminal motor domain which includes nucleotide-binding and microtubule-interacting regions, a stalk domain containing a predicted coiled coil motif and a C-terminal tail domain. Alternatively spliced transcript variants have been observed for this gene. Pseudogenes associated with this gene are located on chromosome 9. [provided by RefSeq, Dec 2012]
PHENOTYPE: Homozygous mice are small and die by 8 weeks and exhibit hydrocephalus, rhinitis and otitis media. [provided by MGI curators]
Allele List at MGI

All alleles(9) : Targeted(2) Gene trapped(7)

Other mutations in this stock
Total: 100 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abcc5 G A 16: 20,184,701 (GRCm39) P986L probably damaging Het
Acad10 A T 5: 121,769,456 (GRCm39) Y667N possibly damaging Het
Ahi1 G A 10: 20,839,014 (GRCm39) G121D probably benign Het
Ampd1 T A 3: 103,006,442 (GRCm39) I690N possibly damaging Het
Amy1 C A 3: 113,351,814 (GRCm39) W425L possibly damaging Het
Arhgap27 A T 11: 103,223,831 (GRCm39) V823E probably damaging Het
Arhgef17 A G 7: 100,579,077 (GRCm39) S624P probably damaging Het
Arid5b T C 10: 68,021,897 (GRCm39) H231R probably damaging Het
Aspscr1 C A 11: 120,579,386 (GRCm39) T78N probably damaging Het
Auts2 T A 5: 131,501,288 (GRCm39) T42S probably damaging Het
Ccdc171 A G 4: 83,473,045 (GRCm39) D158G probably damaging Het
Ces4a G A 8: 105,864,729 (GRCm39) G69S probably damaging Het
Cfap61 T C 2: 145,781,913 (GRCm39) probably null Het
Chrna5 T C 9: 54,911,935 (GRCm39) V245A possibly damaging Het
Cntnap5c G A 17: 58,320,916 (GRCm39) G163R probably damaging Het
Col5a2 A G 1: 45,417,465 (GRCm39) probably null Het
Col5a2 T C 1: 45,433,936 (GRCm39) Q759R probably damaging Het
Comp A G 8: 70,829,796 (GRCm39) D340G probably benign Het
Cyfip1 T A 7: 55,576,143 (GRCm39) D1104E probably damaging Het
Dnah11 A T 12: 118,002,515 (GRCm39) S308T probably damaging Het
Dnah5 A G 15: 28,270,572 (GRCm39) H958R probably benign Het
Elp3 A G 14: 65,785,368 (GRCm39) Y478H probably damaging Het
Fam237b A T 5: 5,625,652 (GRCm39) Q116L possibly damaging Het
Fat3 T C 9: 16,288,281 (GRCm39) Y414C probably benign Het
Fbxo10 C A 4: 45,046,389 (GRCm39) A574S probably damaging Het
Fsip2 G T 2: 82,807,906 (GRCm39) L1408F probably benign Het
Fubp3 T C 2: 31,501,747 (GRCm39) V425A possibly damaging Het
Gm7168 A T 17: 14,169,846 (GRCm39) R404S probably benign Het
Gpd1 T G 15: 99,621,083 (GRCm39) F299C probably damaging Het
Gpr137 C T 19: 6,919,425 (GRCm39) probably benign Het
Grin3b T C 10: 79,809,242 (GRCm39) S331P probably benign Het
Grk3 T A 5: 113,089,584 (GRCm39) I281F probably damaging Het
Hoxb7 T A 11: 96,177,607 (GRCm39) S18R probably damaging Het
Igf1r C T 7: 67,864,681 (GRCm39) R1160* probably null Het
Itfg1 A G 8: 86,452,141 (GRCm39) probably null Het
Itgb8 T C 12: 119,166,190 (GRCm39) I114V probably benign Het
Kcnk1 A G 8: 126,752,123 (GRCm39) E243G possibly damaging Het
Kif2c T A 4: 117,024,558 (GRCm39) Q279L probably benign Het
Kmt2d A T 15: 98,749,955 (GRCm39) probably benign Het
L3mbtl1 A G 2: 162,816,422 (GRCm39) T821A probably benign Het
Lrrc24 A T 15: 76,606,778 (GRCm39) M206K probably benign Het
Mamdc4 T G 2: 25,457,634 (GRCm39) K460Q possibly damaging Het
Maml2 C G 9: 13,608,641 (GRCm39) L30V probably damaging Het
Mc5r C G 18: 68,471,741 (GRCm39) probably null Het
Myo10 T G 15: 25,726,611 (GRCm39) probably null Het
Myo1e T A 9: 70,246,066 (GRCm39) L419Q probably damaging Het
Myo6 C A 9: 80,207,854 (GRCm39) H1115Q probably damaging Het
Myo7a A G 7: 97,756,302 (GRCm39) V10A probably damaging Het
Myoz2 C T 3: 122,819,776 (GRCm39) R61H probably damaging Het
Ncdn G A 4: 126,645,796 (GRCm39) R38C probably damaging Het
Nckap1 T A 2: 80,350,900 (GRCm39) T736S probably benign Het
Ncor2 G A 5: 125,096,954 (GRCm39) A2325V probably damaging Het
Nid2 T A 14: 19,802,499 (GRCm39) V140E possibly damaging Het
Nlrp9c C A 7: 26,079,915 (GRCm39) D704Y probably benign Het
Notch3 T A 17: 32,377,699 (GRCm39) S126C probably damaging Het
Or2g7 T C 17: 38,378,839 (GRCm39) I259T probably damaging Het
Or5p60 A G 7: 107,724,122 (GRCm39) F116S probably benign Het
Or5w10 A T 2: 87,375,327 (GRCm39) L187H probably damaging Het
Or6c219 A T 10: 129,781,451 (GRCm39) L160* probably null Het
Or6c6c T C 10: 129,541,476 (GRCm39) M243T possibly damaging Het
Or6d15 A C 6: 116,559,658 (GRCm39) F83C probably damaging Het
Pdzd7 A G 19: 45,027,667 (GRCm39) I269T probably damaging Het
Phf3 A T 1: 30,845,287 (GRCm39) D1299E probably damaging Het
Pitx2 T A 3: 129,012,403 (GRCm39) Y271N probably damaging Het
Polk T C 13: 96,633,140 (GRCm39) E301G probably damaging Het
Prkdc C A 16: 15,557,388 (GRCm39) N2230K probably damaging Het
Prlr A G 15: 10,322,622 (GRCm39) E170G probably benign Het
Prss55 A G 14: 64,313,179 (GRCm39) I235T probably damaging Het
Psd3 T C 8: 68,413,217 (GRCm39) I724V probably benign Het
Rabep2 A G 7: 126,037,971 (GRCm39) T248A possibly damaging Het
Rbm26 T A 14: 105,354,509 (GRCm39) K949N probably benign Het
Rnf213 T A 11: 119,331,047 (GRCm39) D2085E probably damaging Het
Serpinb7 A T 1: 107,378,003 (GRCm39) H232L possibly damaging Het
Slu7 A G 11: 43,336,069 (GRCm39) Q484R probably benign Het
Smg1 A G 7: 117,745,021 (GRCm39) S3044P possibly damaging Het
Snrnp48 A G 13: 38,405,336 (GRCm39) D248G possibly damaging Het
Snrpc C A 17: 28,064,193 (GRCm39) P66Q unknown Het
Snrpn T A 7: 59,633,207 (GRCm39) probably benign Het
Spag17 T A 3: 99,846,672 (GRCm39) S65R possibly damaging Het
Srsf6 C A 2: 162,776,408 (GRCm39) probably benign Het
Stil T A 4: 114,898,979 (GRCm39) M1203K probably benign Het
Syt17 T C 7: 118,036,061 (GRCm39) T106A probably benign Het
Tbx15 C T 3: 99,259,562 (GRCm39) Q478* probably null Het
Tg A T 15: 66,609,397 (GRCm39) Q319L probably benign Het
Thada A G 17: 84,755,461 (GRCm39) L243P probably damaging Het
Thada G T 17: 84,755,462 (GRCm39) L243I probably damaging Het
Tnnt3 A G 7: 142,066,101 (GRCm39) R211G probably damaging Het
Togaram1 A T 12: 65,049,409 (GRCm39) Q1282L possibly damaging Het
Tpm3-rs7 T G 14: 113,552,379 (GRCm39) M91R probably damaging Het
Trappc9 G A 15: 72,897,816 (GRCm39) R377W probably damaging Het
Ttll7 T G 3: 146,621,535 (GRCm39) L378R probably damaging Het
Tyw1 T G 5: 130,287,834 (GRCm39) I22R probably damaging Het
Ubr3 T C 2: 69,846,711 (GRCm39) S1645P possibly damaging Het
Ubr4 T C 4: 139,120,364 (GRCm39) L263P probably damaging Het
Unc13c T C 9: 73,663,621 (GRCm39) E1071G possibly damaging Het
Vmn2r44 G T 7: 8,383,122 (GRCm39) D157E possibly damaging Het
Vps16 C T 2: 130,285,520 (GRCm39) T821I probably benign Het
Washc4 T C 10: 83,415,389 (GRCm39) V793A possibly damaging Het
Wdr35 G T 12: 9,027,435 (GRCm39) probably null Het
Zfp277 A G 12: 40,414,084 (GRCm39) F254L probably benign Het
Other mutations in Kif27
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00264:Kif27 APN 13 58,485,418 (GRCm39) missense probably benign
IGL00421:Kif27 APN 13 58,491,703 (GRCm39) missense probably damaging 1.00
IGL00903:Kif27 APN 13 58,492,486 (GRCm39) missense possibly damaging 0.69
IGL01024:Kif27 APN 13 58,436,015 (GRCm39) missense possibly damaging 0.71
IGL01070:Kif27 APN 13 58,491,907 (GRCm39) missense probably damaging 1.00
IGL01761:Kif27 APN 13 58,485,459 (GRCm39) missense probably benign
IGL02160:Kif27 APN 13 58,473,812 (GRCm39) missense probably damaging 1.00
IGL03162:Kif27 APN 13 58,459,021 (GRCm39) missense probably benign 0.03
P0016:Kif27 UTSW 13 58,451,266 (GRCm39) nonsense probably null
R0016:Kif27 UTSW 13 58,502,528 (GRCm39) missense probably damaging 1.00
R0016:Kif27 UTSW 13 58,502,528 (GRCm39) missense probably damaging 1.00
R0018:Kif27 UTSW 13 58,435,867 (GRCm39) missense probably benign
R0018:Kif27 UTSW 13 58,435,867 (GRCm39) missense probably benign
R0049:Kif27 UTSW 13 58,451,378 (GRCm39) missense probably damaging 1.00
R0049:Kif27 UTSW 13 58,451,378 (GRCm39) missense probably damaging 1.00
R0481:Kif27 UTSW 13 58,459,078 (GRCm39) splice site probably benign
R0960:Kif27 UTSW 13 58,471,781 (GRCm39) missense probably damaging 0.99
R1015:Kif27 UTSW 13 58,468,029 (GRCm39) missense probably damaging 1.00
R1205:Kif27 UTSW 13 58,492,019 (GRCm39) missense probably benign 0.00
R1478:Kif27 UTSW 13 58,451,359 (GRCm39) missense probably damaging 0.98
R1959:Kif27 UTSW 13 58,440,937 (GRCm39) missense probably benign 0.00
R1961:Kif27 UTSW 13 58,440,937 (GRCm39) missense probably benign 0.00
R3508:Kif27 UTSW 13 58,461,026 (GRCm39) missense possibly damaging 0.88
R4168:Kif27 UTSW 13 58,493,562 (GRCm39) missense probably benign 0.01
R4247:Kif27 UTSW 13 58,435,731 (GRCm39) missense probably damaging 0.98
R4307:Kif27 UTSW 13 58,491,937 (GRCm39) missense probably benign 0.00
R4621:Kif27 UTSW 13 58,478,827 (GRCm39) missense probably benign 0.13
R4660:Kif27 UTSW 13 58,471,730 (GRCm39) missense probably damaging 0.99
R4661:Kif27 UTSW 13 58,471,730 (GRCm39) missense probably damaging 0.99
R4736:Kif27 UTSW 13 58,476,785 (GRCm39) missense probably benign 0.04
R4770:Kif27 UTSW 13 58,492,191 (GRCm39) missense probably damaging 1.00
R4853:Kif27 UTSW 13 58,459,072 (GRCm39) missense probably benign 0.06
R4963:Kif27 UTSW 13 58,476,808 (GRCm39) missense possibly damaging 0.85
R4998:Kif27 UTSW 13 58,440,957 (GRCm39) missense probably damaging 0.98
R5134:Kif27 UTSW 13 58,438,904 (GRCm39) missense possibly damaging 0.80
R5225:Kif27 UTSW 13 58,440,915 (GRCm39) missense possibly damaging 0.88
R5835:Kif27 UTSW 13 58,460,960 (GRCm39) critical splice donor site probably null
R5875:Kif27 UTSW 13 58,458,918 (GRCm39) missense probably benign 0.01
R5929:Kif27 UTSW 13 58,491,784 (GRCm39) missense probably benign 0.01
R6175:Kif27 UTSW 13 58,459,051 (GRCm39) missense probably damaging 1.00
R6446:Kif27 UTSW 13 58,493,530 (GRCm39) missense probably damaging 1.00
R6628:Kif27 UTSW 13 58,502,611 (GRCm39) missense probably damaging 1.00
R7480:Kif27 UTSW 13 58,436,025 (GRCm39) missense probably benign 0.34
R8381:Kif27 UTSW 13 58,438,991 (GRCm39) missense probably benign 0.00
R8815:Kif27 UTSW 13 58,476,818 (GRCm39) missense probably damaging 0.97
R8993:Kif27 UTSW 13 58,473,912 (GRCm39) missense possibly damaging 0.93
R9181:Kif27 UTSW 13 58,492,543 (GRCm39) missense probably damaging 1.00
R9486:Kif27 UTSW 13 58,492,348 (GRCm39) missense probably damaging 1.00
Z1088:Kif27 UTSW 13 58,435,847 (GRCm39) missense probably benign
Predicted Primers PCR Primer
(F):5'- GTCCTTAAACAAGTCCTATCTGTG -3'
(R):5'- CCAGGCATCTTCAGAGAATGTTCC -3'

Sequencing Primer
(F):5'- TCCCATTGTCAACAGAGTGG -3'
(R):5'- CTTCAGAGAATGTTCCTGACCAG -3'
Posted On 2014-06-23