Incidental Mutation 'R1860:Zscan21'
ID 203784
Institutional Source Beutler Lab
Gene Symbol Zscan21
Ensembl Gene ENSMUSG00000037017
Gene Name zinc finger and SCAN domain containing 21
Synonyms RU49, Zfp-38, Zfp38, Zipro1, CTfin51
MMRRC Submission 039883-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R1860 (G1)
Quality Score 225
Status Not validated
Chromosome 5
Chromosomal Location 138115165-138132527 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 138124892 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Aspartic acid to Glutamic Acid at position 269 (D269E)
Ref Sequence ENSEMBL: ENSMUSP00000106586 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000062350] [ENSMUST00000080732] [ENSMUST00000110959] [ENSMUST00000110960] [ENSMUST00000110961] [ENSMUST00000136425]
AlphaFold Q07231
Predicted Effect probably benign
Transcript: ENSMUST00000062350
AA Change: D269E

PolyPhen 2 Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)
SMART Domains Protein: ENSMUSP00000053430
Gene: ENSMUSG00000037017
AA Change: D269E

DomainStartEndE-ValueType
low complexity region 28 37 N/A INTRINSIC
SCAN 118 230 1.7e-80 SMART
ZnF_C2H2 359 381 3.95e-4 SMART
ZnF_C2H2 387 409 4.87e-4 SMART
ZnF_C2H2 415 436 1.26e1 SMART
ZnF_C2H2 442 464 4.3e-5 SMART
ZnF_C2H2 470 492 3.95e-4 SMART
ZnF_C2H2 498 520 1.38e-3 SMART
ZnF_C2H2 526 548 2.2e-2 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000080732
AA Change: D269E

PolyPhen 2 Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)
SMART Domains Protein: ENSMUSP00000079557
Gene: ENSMUSG00000037017
AA Change: D269E

DomainStartEndE-ValueType
low complexity region 28 37 N/A INTRINSIC
SCAN 118 230 1.7e-80 SMART
ZnF_C2H2 359 381 3.95e-4 SMART
ZnF_C2H2 387 409 4.87e-4 SMART
ZnF_C2H2 415 436 1.26e1 SMART
ZnF_C2H2 442 464 4.3e-5 SMART
ZnF_C2H2 470 492 3.95e-4 SMART
ZnF_C2H2 498 520 1.38e-3 SMART
ZnF_C2H2 526 548 2.2e-2 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000110959
AA Change: D269E

PolyPhen 2 Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)
SMART Domains Protein: ENSMUSP00000106584
Gene: ENSMUSG00000037017
AA Change: D269E

DomainStartEndE-ValueType
low complexity region 28 37 N/A INTRINSIC
SCAN 118 230 1.7e-80 SMART
ZnF_C2H2 359 381 3.95e-4 SMART
ZnF_C2H2 387 409 4.87e-4 SMART
ZnF_C2H2 415 436 1.26e1 SMART
ZnF_C2H2 442 464 4.3e-5 SMART
ZnF_C2H2 470 492 3.95e-4 SMART
ZnF_C2H2 498 520 1.38e-3 SMART
ZnF_C2H2 526 548 2.2e-2 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000110960
AA Change: D269E

PolyPhen 2 Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)
SMART Domains Protein: ENSMUSP00000106585
Gene: ENSMUSG00000037017
AA Change: D269E

DomainStartEndE-ValueType
low complexity region 28 37 N/A INTRINSIC
SCAN 118 230 1.7e-80 SMART
ZnF_C2H2 359 381 3.95e-4 SMART
ZnF_C2H2 387 409 4.87e-4 SMART
ZnF_C2H2 415 436 1.26e1 SMART
ZnF_C2H2 442 464 4.3e-5 SMART
ZnF_C2H2 470 492 3.95e-4 SMART
ZnF_C2H2 498 520 1.38e-3 SMART
ZnF_C2H2 526 548 2.2e-2 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000110961
AA Change: D269E

PolyPhen 2 Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)
SMART Domains Protein: ENSMUSP00000106586
Gene: ENSMUSG00000037017
AA Change: D269E

DomainStartEndE-ValueType
low complexity region 28 37 N/A INTRINSIC
SCAN 118 230 1.7e-80 SMART
ZnF_C2H2 359 381 3.95e-4 SMART
ZnF_C2H2 387 409 4.87e-4 SMART
ZnF_C2H2 415 436 1.26e1 SMART
ZnF_C2H2 442 464 4.3e-5 SMART
ZnF_C2H2 470 492 3.95e-4 SMART
ZnF_C2H2 498 520 1.38e-3 SMART
ZnF_C2H2 526 548 2.2e-2 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000136425
SMART Domains Protein: ENSMUSP00000119570
Gene: ENSMUSG00000037017

DomainStartEndE-ValueType
internal_repeat_1 18 58 3.16e-6 PROSPERO
Pfam:SCAN 116 160 2.5e-20 PFAM
Predicted Effect unknown
Transcript: ENSMUST00000142185
AA Change: D90E
Coding Region Coverage
  • 1x: 97.4%
  • 3x: 96.8%
  • 10x: 95.1%
  • 20x: 91.7%
Validation Efficiency
MGI Phenotype PHENOTYPE: Homozygotes for a targeted null mutation appear to be phenotypically normal. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 83 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930522L14Rik A G 5: 109,884,098 (GRCm39) C587R probably damaging Het
Abca16 T A 7: 120,133,986 (GRCm39) S1320T probably benign Het
Abra C A 15: 41,732,430 (GRCm39) R212L probably damaging Het
Acadsb T A 7: 131,045,958 (GRCm39) probably null Het
Adam26a A G 8: 44,022,578 (GRCm39) V304A possibly damaging Het
Adgre1 T C 17: 57,748,363 (GRCm39) V521A probably benign Het
Adh5 G A 3: 138,159,539 (GRCm39) V288I probably benign Het
Astn1 A C 1: 158,429,515 (GRCm39) N753T probably damaging Het
Atad2 A T 15: 57,960,114 (GRCm39) probably null Het
Best3 A G 10: 116,829,178 (GRCm39) T153A probably damaging Het
Ccdc122 G A 14: 77,348,847 (GRCm39) V226I probably damaging Het
Ccdc175 T C 12: 72,152,700 (GRCm39) Q735R probably benign Het
Cd19 T A 7: 126,008,813 (GRCm39) I499F probably damaging Het
Cftr T A 6: 18,268,288 (GRCm39) L749H probably benign Het
Clec2h G T 6: 128,652,790 (GRCm39) G186W probably damaging Het
Cpsf3 T A 12: 21,346,733 (GRCm39) I202N probably damaging Het
Crebbp G T 16: 3,905,600 (GRCm39) T1669N possibly damaging Het
Csmd3 A T 15: 47,522,588 (GRCm39) C2694S probably damaging Het
Cul4a G A 8: 13,173,565 (GRCm39) R204Q probably damaging Het
Derl2 A G 11: 70,909,169 (GRCm39) F43S probably damaging Het
Dnah14 T A 1: 181,591,525 (GRCm39) N3348K probably damaging Het
Dnhd1 T C 7: 105,353,412 (GRCm39) V2855A probably benign Het
Dpysl4 G T 7: 138,670,215 (GRCm39) C27F probably benign Het
Fam228b G A 12: 4,798,314 (GRCm39) A163V probably damaging Het
Fscn1 T C 5: 142,955,818 (GRCm39) probably null Het
Fzd5 C A 1: 64,774,153 (GRCm39) R536L probably damaging Het
Gm8180 T A 14: 44,021,196 (GRCm39) H4L probably benign Het
Gpr176 T A 2: 118,203,659 (GRCm39) N4Y probably damaging Het
Grin3a T C 4: 49,665,309 (GRCm39) I1109V possibly damaging Het
Hcar1 T A 5: 124,017,092 (GRCm39) I200F probably damaging Het
Heatr4 G A 12: 84,026,502 (GRCm39) Q252* probably null Het
Hps1 G A 19: 42,750,888 (GRCm39) H371Y probably damaging Het
Ikzf2 T C 1: 69,609,661 (GRCm39) T195A probably damaging Het
Kdm1b G A 13: 47,202,666 (GRCm39) A34T probably benign Het
Lef1 A G 3: 130,905,290 (GRCm39) N57S probably damaging Het
Ltn1 A T 16: 87,213,231 (GRCm39) D443E probably benign Het
Macroh2a1 A G 13: 56,231,017 (GRCm39) L287P probably damaging Het
Mamdc2 T C 19: 23,336,517 (GRCm39) T331A probably damaging Het
Marchf10 A T 11: 105,287,904 (GRCm39) S133T probably damaging Het
Mb A G 15: 76,901,784 (GRCm39) Y104H probably damaging Het
Mrc1 C A 2: 14,333,390 (GRCm39) P1357Q probably benign Het
Nfib C T 4: 82,241,917 (GRCm39) V425M probably damaging Het
Or12j2 G A 7: 139,916,132 (GRCm39) R119H possibly damaging Het
Or4a27 T G 2: 88,559,674 (GRCm39) I90L probably damaging Het
Or4b1b C A 2: 90,112,502 (GRCm39) C139F probably damaging Het
Or4c127 G A 2: 89,833,490 (GRCm39) V247I probably benign Het
Or4n4 A T 14: 50,518,848 (GRCm39) Y287* probably null Het
Or52u1 T C 7: 104,237,112 (GRCm39) S34P probably damaging Het
Or5b113 T A 19: 13,342,705 (GRCm39) S238T possibly damaging Het
Or5p53 A G 7: 107,533,597 (GRCm39) Y290C probably damaging Het
Or6c208 T C 10: 129,223,955 (GRCm39) F151S probably damaging Het
Or8b51 A T 9: 38,569,661 (GRCm39) V9E probably damaging Het
Phaf1 A G 8: 105,966,703 (GRCm39) E150G probably null Het
Piezo1 T C 8: 123,222,489 (GRCm39) N919S possibly damaging Het
Prkaca T C 8: 84,707,852 (GRCm39) S46P probably benign Het
Prkcb T G 7: 122,167,424 (GRCm39) V378G probably damaging Het
Ptprf A T 4: 118,081,129 (GRCm39) L576Q probably damaging Het
Rapgef4 T C 2: 72,065,064 (GRCm39) V687A probably benign Het
Rsad2 C T 12: 26,500,616 (GRCm39) V224I probably damaging Het
Ryr1 A T 7: 28,708,977 (GRCm39) D4796E unknown Het
Scn1a C T 2: 66,148,326 (GRCm39) S1073N probably damaging Het
Slc26a3 A G 12: 31,515,845 (GRCm39) M582V probably benign Het
Tbc1d32 A T 10: 55,999,633 (GRCm39) Y846* probably null Het
Tbk1 A T 10: 121,383,076 (GRCm39) M719K probably benign Het
Timeless A G 10: 128,081,983 (GRCm39) K536R probably benign Het
Tle6 G T 10: 81,430,163 (GRCm39) Q330K probably damaging Het
Tmem208 A G 8: 106,061,438 (GRCm39) K155E possibly damaging Het
Toe1 T C 4: 116,662,426 (GRCm39) Y273C probably damaging Het
Tppp2 A C 14: 52,158,062 (GRCm39) N169T probably benign Het
Ttll6 T A 11: 96,029,700 (GRCm39) Y204* probably null Het
Ubxn11 G A 4: 133,852,149 (GRCm39) S32N probably damaging Het
Usp8 G A 2: 126,597,960 (GRCm39) C961Y probably damaging Het
Vdac3 A T 8: 23,070,515 (GRCm39) I132K possibly damaging Het
Vmn2r124 G T 17: 18,269,759 (GRCm39) W5L probably benign Het
Vmn2r71 A T 7: 85,264,782 (GRCm39) D38V probably damaging Het
Vmn2r87 C T 10: 130,315,755 (GRCm39) V104I probably benign Het
Vmn2r97 C T 17: 19,167,648 (GRCm39) T634I probably benign Het
Vps50 T C 6: 3,520,279 (GRCm39) probably null Het
Wwc2 T C 8: 48,443,137 (GRCm39) N32S possibly damaging Het
Ythdc2 T A 18: 45,006,023 (GRCm39) I1172K possibly damaging Het
Zfp14 C T 7: 29,738,116 (GRCm39) V290M probably damaging Het
Zfp317 G A 9: 19,553,280 (GRCm39) A18T possibly damaging Het
Zfp354b A T 11: 50,814,369 (GRCm39) N185K probably benign Het
Other mutations in Zscan21
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00775:Zscan21 APN 5 138,131,310 (GRCm39) nonsense probably null
IGL02348:Zscan21 APN 5 138,131,645 (GRCm39) missense probably damaging 0.99
IGL03295:Zscan21 APN 5 138,123,540 (GRCm39) missense possibly damaging 0.85
R0454:Zscan21 UTSW 5 138,131,865 (GRCm39) missense possibly damaging 0.77
R0471:Zscan21 UTSW 5 138,123,402 (GRCm39) missense probably benign 0.33
R1465:Zscan21 UTSW 5 138,123,470 (GRCm39) missense probably benign 0.18
R1465:Zscan21 UTSW 5 138,123,470 (GRCm39) missense probably benign 0.18
R5498:Zscan21 UTSW 5 138,131,522 (GRCm39) missense probably benign
R5851:Zscan21 UTSW 5 138,124,740 (GRCm39) missense probably benign 0.39
R6213:Zscan21 UTSW 5 138,123,359 (GRCm39) missense probably benign 0.09
R7079:Zscan21 UTSW 5 138,124,728 (GRCm39) missense probably benign 0.11
R7448:Zscan21 UTSW 5 138,116,110 (GRCm39) start gained probably benign
R8436:Zscan21 UTSW 5 138,116,178 (GRCm39) missense unknown
R9116:Zscan21 UTSW 5 138,123,937 (GRCm39) missense probably damaging 0.99
Predicted Primers PCR Primer
(F):5'- GTGCACACACCTAGCCATTTC -3'
(R):5'- TTCCAGTCAACCCTCTGCAAG -3'

Sequencing Primer
(F):5'- GCACACACCTAGCCATTTCTTATTG -3'
(R):5'- CTCTGCAAGCACGCTGC -3'
Posted On 2014-06-23