Mutagenetix > Incidental Mutation

Incidental Mutation 'R1833:Or4c10'

204921

Institutional Source

Beutler Lab

Gene Symbol

Or4c10

Ensembl Gene

ENSMUSG00000049149

Gene Name

olfactory receptor family 4 subfamily C member 10

Synonyms

GA_x6K02T2Q125-51361752-51362687, MOR232-3, Olfr1258

MMRRC Submission

039860-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.054) question?

Stock #

R1833 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

89752288-89761090 bp(+) (GRCm39)

Type of Mutation

nonsense

DNA Base Change (assembly)

T to A at 89760645 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Leucine to Stop codon at position 164 (L164*)

Ref Sequence

ENSEMBL: ENSMUSP00000149547 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000102609] [ENSMUST00000111516] [ENSMUST00000213720]

AlphaFold

Q8VGN6

Predicted Effect

probably null
Transcript: ENSMUST00000102609
AA Change: L164*

SMART Domains

Protein: ENSMUSP00000099669
Gene: ENSMUSG00000049149
AA Change: L164*

Domain	Start	End	E-Value	Type
Pfam:7tm_4	29	303	2.6e-52	PFAM
Pfam:7TM_GPCR_Srsx	33	299	3.4e-5	PFAM
Pfam:7tm_1	39	285	6.4e-20	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000111516
AA Change: L164*

SMART Domains

Protein: ENSMUSP00000107141
Gene: ENSMUSG00000049149
AA Change: L164*

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srsx	33	299	3.4e-5	PFAM
Pfam:7tm_1	39	285	4.9e-32	PFAM
Pfam:7tm_4	137	278	2.7e-43	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000213720
AA Change: L164*

Meta Mutation Damage Score

0.9755

Coding Region Coverage

1x: 97.4%
3x: 96.8%
10x: 95.1%
20x: 91.9%

Validation Efficiency

99% (83/84)

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 79 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700003H04Rik	T	A	3: 124,350,509 (GRCm39)	D143V	unknown	Het
4930438A08Rik	C	T	11: 58,179,214 (GRCm39)	Q183*	probably null	Het
9230009I02Rik	A	G	11: 50,982,293 (GRCm39)		noncoding transcript	Het
Abhd12	T	A	2: 150,690,338 (GRCm39)	D119V	probably damaging	Het
Adam1b	A	G	5: 121,641,000 (GRCm39)	I15T	possibly damaging	Het
Agtpbp1	A	T	13: 59,613,797 (GRCm39)		probably null	Het
Arfgef1	G	C	1: 10,275,115 (GRCm39)	I312M	probably benign	Het
Arid4a	C	T	12: 71,122,240 (GRCm39)	L874F	possibly damaging	Het
Bcas3	G	A	11: 85,474,775 (GRCm39)	V317I	probably benign	Het
Ccr1	T	A	9: 123,764,126 (GRCm39)	I135F	probably damaging	Het
Ces2h	A	G	8: 105,747,005 (GRCm39)	E547G	possibly damaging	Het
Ces3b	T	A	8: 105,812,271 (GRCm39)	D173E	probably damaging	Het
Chd3	A	G	11: 69,244,949 (GRCm39)	L1197S	probably damaging	Het
Cngb1	A	G	8: 95,968,983 (GRCm39)	L1175P	probably damaging	Het
Cyp4f17	T	C	17: 32,743,184 (GRCm39)	F286L	probably benign	Het
Dclre1a	C	T	19: 56,529,932 (GRCm39)		probably null	Het
Dennd6a	T	A	14: 26,328,109 (GRCm39)	L44H	probably damaging	Het
Dhx16	A	G	17: 36,196,511 (GRCm39)	T560A	probably benign	Het
Dusp12	T	C	1: 170,702,022 (GRCm39)	M326V	probably benign	Het
Eif3k	T	C	7: 28,670,852 (GRCm39)	I180V	probably benign	Het
Erc1	A	G	6: 119,720,390 (GRCm39)	I437T	possibly damaging	Het
Farp2	T	A	1: 93,504,086 (GRCm39)		probably benign	Het
Foxa3	A	G	7: 18,748,499 (GRCm39)	L209P	probably damaging	Het
Garin2	G	A	12: 78,762,280 (GRCm39)		probably benign	Het
Gen1	A	T	12: 11,298,352 (GRCm39)		probably benign	Het
Gm10305	A	G	4: 99,161,363 (GRCm39)	T91A	unknown	Het
Gm14412	T	C	2: 177,007,583 (GRCm39)	D104G	probably benign	Het
Gm6900	T	C	7: 10,390,515 (GRCm39)		noncoding transcript	Het
Gpx1	A	T	9: 108,216,555 (GRCm39)	Y15F	possibly damaging	Het
H2-M10.3	T	C	17: 36,678,387 (GRCm39)	Y146C	probably damaging	Het
H2-Q7	C	A	17: 35,658,675 (GRCm39)	S104R	probably benign	Het
Hephl1	T	C	9: 14,988,224 (GRCm39)	Y628C	probably damaging	Het
Hspa5	T	A	2: 34,666,065 (GRCm39)	Y636*	probably null	Het
Htt	A	G	5: 35,063,092 (GRCm39)		probably benign	Het
Idh1	T	C	1: 65,200,273 (GRCm39)	I364V	probably benign	Het
Itgae	G	T	11: 73,007,988 (GRCm39)	A423S	possibly damaging	Het
Kng2	T	C	16: 22,830,802 (GRCm39)	N169S	possibly damaging	Het
Larp4b	C	T	13: 9,201,235 (GRCm39)	T369I	possibly damaging	Het
Lcor	T	C	19: 41,573,387 (GRCm39)	I714T	probably benign	Het
Lhfpl7	A	G	5: 113,382,435 (GRCm39)		probably benign	Het
Lonrf2	G	A	1: 38,852,357 (GRCm39)	P165S	probably benign	Het
Magi2	G	T	5: 19,432,455 (GRCm39)	G57C	probably damaging	Het
Mdn1	T	A	4: 32,720,761 (GRCm39)	H2291Q	probably damaging	Het
Mgam	T	C	6: 40,631,652 (GRCm39)		probably null	Het
Micall2	A	G	5: 139,702,508 (GRCm39)	V245A	probably benign	Het
Mipep	T	G	14: 61,109,512 (GRCm39)	Y630D	probably damaging	Het
Msx2	A	T	13: 53,622,221 (GRCm39)	M263K	probably damaging	Het
Nectin2	G	T	7: 19,451,633 (GRCm39)	P467H	probably damaging	Het
Nek10	A	T	14: 14,842,789 (GRCm38)	M165L	probably benign	Het
Nlrp4b	A	T	7: 10,459,863 (GRCm39)	M455L	probably benign	Het
Oaz3	TGGAGGCAGGAGCACGGGAGGCAGGAGCACGGGAGGCAG	TGGAGGCAGGAGCACGGGAGGCAG	3: 94,343,349 (GRCm39)		probably benign	Het
Or10ad1b	T	A	15: 98,124,846 (GRCm39)	I227F	probably damaging	Het
Pcx	T	A	19: 4,669,132 (GRCm39)	V710E	probably damaging	Het
Pkn2	C	T	3: 142,527,408 (GRCm39)	R347Q	probably damaging	Het
Pramel51	T	C	12: 88,145,218 (GRCm39)	E44G	possibly damaging	Het
Qsox1	C	T	1: 155,666,791 (GRCm39)	G233S	probably benign	Het
Rbl1	T	A	2: 157,037,475 (GRCm39)	N224I	probably damaging	Het
Rspry1	A	G	8: 95,362,116 (GRCm39)	T132A	probably damaging	Het
Sclt1	A	G	3: 41,681,546 (GRCm39)	V91A	probably damaging	Het
Sema4f	A	T	6: 82,895,540 (GRCm39)	L331H	probably benign	Het
Sf3b3	T	A	8: 111,544,198 (GRCm39)	Q814L	probably benign	Het
Slc19a2	T	G	1: 164,089,753 (GRCm39)	Y190D	probably damaging	Het
Smarcc1	T	A	9: 109,982,879 (GRCm39)	H204Q	possibly damaging	Het
Sox6	T	C	7: 115,376,328 (GRCm39)	K135E	probably damaging	Het
Tecpr1	T	C	5: 144,145,426 (GRCm39)	Q607R	probably damaging	Het
Tgfb1i1	A	G	7: 127,848,670 (GRCm39)		probably benign	Het
Tirap	T	G	9: 35,099,999 (GRCm39)	R228S	probably benign	Het
Trp53bp2	T	A	1: 182,256,581 (GRCm39)	H50Q	probably damaging	Het
Try4	A	G	6: 41,280,365 (GRCm39)	H63R	probably damaging	Het
Vmn2r25	G	A	6: 123,816,643 (GRCm39)	P313S	probably benign	Het
Vps26a	A	C	10: 62,294,825 (GRCm39)	L250V	probably benign	Het
Vwf	A	G	6: 125,619,000 (GRCm39)	H1226R	probably benign	Het
Wdtc1	TCC	TC	4: 133,036,053 (GRCm39)		probably benign	Het
Zc3hav1l	A	T	6: 38,274,881 (GRCm39)		probably benign	Het
Zfp119b	T	G	17: 56,246,271 (GRCm39)	H305P	probably damaging	Het
Zfp326	C	T	5: 106,039,035 (GRCm39)	Q134*	probably null	Het
Zfp975	C	T	7: 42,311,263 (GRCm39)	R450Q	probably benign	Het
Zfyve26	A	T	12: 79,333,032 (GRCm39)	M313K	probably benign	Het
Zscan5b	T	C	7: 6,241,965 (GRCm39)	S395P	possibly damaging	Het

Other mutations in Or4c10

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02386:Or4c10	APN	2	89,760,888 (GRCm39)	missense	probably damaging	0.96
IGL02552:Or4c10	APN	2	89,760,903 (GRCm39)	missense	probably benign	0.01
IGL03300:Or4c10	APN	2	89,760,571 (GRCm39)	nonsense	probably null
R0081:Or4c10	UTSW	2	89,760,423 (GRCm39)	missense	possibly damaging	0.90
R0197:Or4c10	UTSW	2	89,760,545 (GRCm39)	missense	probably benign	0.00
R0701:Or4c10	UTSW	2	89,760,545 (GRCm39)	missense	probably benign	0.00
R0883:Or4c10	UTSW	2	89,760,545 (GRCm39)	missense	probably benign	0.00
R1163:Or4c10	UTSW	2	89,760,449 (GRCm39)	missense	possibly damaging	0.78
R1846:Or4c10	UTSW	2	89,761,010 (GRCm39)	missense	possibly damaging	0.45
R4504:Or4c10	UTSW	2	89,760,695 (GRCm39)	missense	possibly damaging	0.89
R4507:Or4c10	UTSW	2	89,760,695 (GRCm39)	missense	possibly damaging	0.89
R4679:Or4c10	UTSW	2	89,761,008 (GRCm39)	missense	possibly damaging	0.63
R4908:Or4c10	UTSW	2	89,760,923 (GRCm39)	missense	probably benign	0.00
R5430:Or4c10	UTSW	2	89,760,257 (GRCm39)	missense	probably benign	0.00
R6836:Or4c10	UTSW	2	89,760,683 (GRCm39)	missense	probably damaging	1.00
R7552:Or4c10	UTSW	2	89,761,064 (GRCm39)	missense	probably benign	0.06
R7709:Or4c10	UTSW	2	89,760,225 (GRCm39)	missense	probably benign	0.00
R8060:Or4c10	UTSW	2	89,760,693 (GRCm39)	missense	probably benign	0.04
R8349:Or4c10	UTSW	2	89,760,878 (GRCm39)	missense	possibly damaging	0.48
R8449:Or4c10	UTSW	2	89,760,878 (GRCm39)	missense	possibly damaging	0.48
Z1177:Or4c10	UTSW	2	89,760,942 (GRCm39)	nonsense	probably null

Predicted Primers

PCR Primer
(F):5'- TGCATGACCCAGGTCTTTGG -3'
(R):5'- GCACTGTGGTTTCTTAATGAACGTAG -3'

Sequencing Primer
(F):5'- CCAGGTCTTTGGGGAGCATTTC -3'
(R):5'- GGTTTCTTAATGAACGTAGAATGACC -3'

Posted On

2014-06-23