Incidental Mutation 'R1835:Trpm1'
ID |
205170 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Trpm1
|
Ensembl Gene |
ENSMUSG00000030523 |
Gene Name |
transient receptor potential cation channel, subfamily M, member 1 |
Synonyms |
Mlsn1, melastatin, 4732499L03Rik, LTRPC1 |
MMRRC Submission |
039862-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R1835 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
7 |
Chromosomal Location |
63803583-63919523 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to G
at 63880016 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Lysine to Glutamic Acid
at position 790
(K790E)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000146226
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000085222]
[ENSMUST00000205348]
[ENSMUST00000206263]
[ENSMUST00000206277]
[ENSMUST00000206314]
|
AlphaFold |
Q2TV84 |
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000085222
AA Change: K790E
PolyPhen 2
Score 0.834 (Sensitivity: 0.84; Specificity: 0.93)
|
SMART Domains |
Protein: ENSMUSP00000082318 Gene: ENSMUSG00000030523 AA Change: K790E
Domain | Start | End | E-Value | Type |
low complexity region
|
8 |
28 |
N/A |
INTRINSIC |
low complexity region
|
183 |
195 |
N/A |
INTRINSIC |
low complexity region
|
289 |
307 |
N/A |
INTRINSIC |
low complexity region
|
456 |
491 |
N/A |
INTRINSIC |
Blast:ANK
|
505 |
533 |
1e-5 |
BLAST |
low complexity region
|
621 |
650 |
N/A |
INTRINSIC |
low complexity region
|
823 |
835 |
N/A |
INTRINSIC |
transmembrane domain
|
876 |
895 |
N/A |
INTRINSIC |
Pfam:Ion_trans
|
907 |
1120 |
6e-16 |
PFAM |
transmembrane domain
|
1150 |
1167 |
N/A |
INTRINSIC |
low complexity region
|
1216 |
1225 |
N/A |
INTRINSIC |
PDB:3E7K|H
|
1228 |
1279 |
1e-7 |
PDB |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000107525
AA Change: K790E
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000103149 Gene: ENSMUSG00000030523 AA Change: K790E
Domain | Start | End | E-Value | Type |
low complexity region
|
8 |
28 |
N/A |
INTRINSIC |
low complexity region
|
183 |
195 |
N/A |
INTRINSIC |
low complexity region
|
289 |
307 |
N/A |
INTRINSIC |
low complexity region
|
456 |
491 |
N/A |
INTRINSIC |
Blast:ANK
|
505 |
533 |
1e-5 |
BLAST |
low complexity region
|
621 |
650 |
N/A |
INTRINSIC |
low complexity region
|
823 |
835 |
N/A |
INTRINSIC |
Pfam:Ion_trans
|
876 |
1138 |
7.6e-22 |
PFAM |
transmembrane domain
|
1156 |
1173 |
N/A |
INTRINSIC |
Pfam:TRPM_tetra
|
1230 |
1285 |
9.4e-28 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000205348
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000205939
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000206000
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000206263
AA Change: K674E
PolyPhen 2
Score 0.675 (Sensitivity: 0.86; Specificity: 0.92)
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000206277
AA Change: K790E
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000206314
|
Coding Region Coverage |
- 1x: 97.4%
- 3x: 96.8%
- 10x: 94.9%
- 20x: 91.0%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the transient receptor potential melastatin subfamily of transient receptor potential ion channels. The encoded protein is a calcium permeable cation channel that is expressed in melanocytes and may play a role in melanin synthesis. Specific mutations in this gene are the cause autosomal recessive complete congenital stationary night blindness-1C. The expression of this protein is inversely correlated with melanoma aggressiveness and as such it is used as a prognostic marker for melanoma metastasis. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Oct 2011] PHENOTYPE: Homozygous mutants have defects in rod and cone electrophysiology affecting the photoresponses. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 97 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Acss2 |
T |
A |
2: 155,400,550 (GRCm39) |
Y530N |
probably damaging |
Het |
Adam4 |
T |
C |
12: 81,466,333 (GRCm39) |
I763V |
probably benign |
Het |
Aipl1 |
T |
G |
11: 71,921,325 (GRCm39) |
K190T |
possibly damaging |
Het |
Alms1 |
T |
A |
6: 85,655,485 (GRCm39) |
S3344T |
possibly damaging |
Het |
Alpi |
A |
G |
1: 87,027,136 (GRCm39) |
V381A |
possibly damaging |
Het |
Ankfn1 |
A |
T |
11: 89,338,444 (GRCm39) |
S365R |
probably benign |
Het |
Aox1 |
G |
A |
1: 58,348,150 (GRCm39) |
A623T |
probably benign |
Het |
Apc |
T |
A |
18: 34,450,130 (GRCm39) |
L2308Q |
probably damaging |
Het |
Atp9b |
C |
T |
18: 80,822,098 (GRCm39) |
V501I |
probably benign |
Het |
Baz2b |
T |
C |
2: 59,732,163 (GRCm39) |
E1994G |
probably benign |
Het |
Bltp2 |
G |
T |
11: 78,178,576 (GRCm39) |
V1993F |
probably damaging |
Het |
Cacna1a |
T |
C |
8: 85,307,986 (GRCm39) |
|
probably null |
Het |
Cacna1h |
C |
A |
17: 25,611,050 (GRCm39) |
V583L |
probably benign |
Het |
Cd55 |
T |
C |
1: 130,375,346 (GRCm39) |
|
probably benign |
Het |
Cep192 |
T |
A |
18: 67,937,494 (GRCm39) |
S75T |
possibly damaging |
Het |
Cfap54 |
T |
A |
10: 92,798,237 (GRCm39) |
D1674V |
probably benign |
Het |
Churc1 |
T |
C |
12: 76,820,071 (GRCm39) |
F27L |
possibly damaging |
Het |
Coro1c |
A |
G |
5: 113,986,604 (GRCm39) |
I280T |
probably benign |
Het |
Creb1 |
C |
T |
1: 64,590,109 (GRCm39) |
Q32* |
probably null |
Het |
Cyp2b9 |
A |
G |
7: 25,900,208 (GRCm39) |
T339A |
probably benign |
Het |
Dctn3 |
T |
C |
4: 41,720,813 (GRCm39) |
R51G |
probably damaging |
Het |
Ddb1 |
T |
C |
19: 10,603,957 (GRCm39) |
V888A |
probably damaging |
Het |
Disp1 |
A |
G |
1: 182,870,564 (GRCm39) |
Y619H |
probably damaging |
Het |
Dnajc9 |
T |
C |
14: 20,438,402 (GRCm39) |
D96G |
possibly damaging |
Het |
Eepd1 |
A |
G |
9: 25,394,164 (GRCm39) |
T143A |
possibly damaging |
Het |
Eps8 |
T |
A |
6: 137,499,277 (GRCm39) |
K204* |
probably null |
Het |
Ercc5 |
T |
A |
1: 44,220,035 (GRCm39) |
S1102R |
probably benign |
Het |
Ergic2 |
T |
A |
6: 148,091,079 (GRCm39) |
Y211F |
possibly damaging |
Het |
Fam135b |
G |
T |
15: 71,362,560 (GRCm39) |
L274M |
probably damaging |
Het |
Fat3 |
G |
A |
9: 15,909,384 (GRCm39) |
T2206I |
probably damaging |
Het |
Fat4 |
A |
G |
3: 39,037,720 (GRCm39) |
I3791V |
probably benign |
Het |
Gemin4 |
A |
G |
11: 76,104,122 (GRCm39) |
M213T |
possibly damaging |
Het |
Gnai3 |
T |
C |
3: 108,025,723 (GRCm39) |
M119V |
probably benign |
Het |
Heatr5b |
A |
T |
17: 79,080,992 (GRCm39) |
L1420Q |
probably damaging |
Het |
Herc2 |
G |
T |
7: 55,856,513 (GRCm39) |
G3918* |
probably null |
Het |
Ints9 |
A |
G |
14: 65,269,705 (GRCm39) |
Y465C |
probably damaging |
Het |
Ist1 |
A |
G |
8: 110,405,515 (GRCm39) |
V175A |
probably damaging |
Het |
Kcnj12 |
T |
C |
11: 60,960,383 (GRCm39) |
L227P |
possibly damaging |
Het |
Kcnq5 |
T |
C |
1: 21,536,611 (GRCm39) |
S416G |
probably benign |
Het |
Kdm3a |
T |
A |
6: 71,590,940 (GRCm39) |
T295S |
probably benign |
Het |
Kif1c |
T |
A |
11: 70,599,797 (GRCm39) |
M479K |
probably damaging |
Het |
Kif20b |
T |
C |
19: 34,933,438 (GRCm39) |
L83P |
probably damaging |
Het |
Kndc1 |
A |
G |
7: 139,507,624 (GRCm39) |
E1194G |
probably damaging |
Het |
Llgl1 |
A |
G |
11: 60,595,556 (GRCm39) |
M81V |
probably benign |
Het |
Map4k5 |
C |
A |
12: 69,871,436 (GRCm39) |
M495I |
probably damaging |
Het |
Mest |
C |
T |
6: 30,742,790 (GRCm39) |
R146C |
probably benign |
Het |
Mettl24 |
T |
A |
10: 40,613,812 (GRCm39) |
|
probably null |
Het |
Mical1 |
T |
C |
10: 41,359,531 (GRCm39) |
S586P |
probably benign |
Het |
Mrgpra3 |
G |
T |
7: 47,239,694 (GRCm39) |
Y77* |
probably null |
Het |
Mss51 |
A |
T |
14: 20,533,246 (GRCm39) |
C408* |
probably null |
Het |
Myh6 |
T |
C |
14: 55,194,858 (GRCm39) |
T666A |
probably benign |
Het |
Myo10 |
T |
C |
15: 25,805,673 (GRCm39) |
C1685R |
possibly damaging |
Het |
Naip5 |
A |
T |
13: 100,359,726 (GRCm39) |
Y503* |
probably null |
Het |
Neil1 |
A |
C |
9: 57,053,888 (GRCm39) |
F144C |
probably damaging |
Het |
Nipbl |
T |
A |
15: 8,373,001 (GRCm39) |
I1082F |
possibly damaging |
Het |
Nkiras1 |
T |
C |
14: 18,276,732 (GRCm38) |
V7A |
probably damaging |
Het |
Nt5el |
C |
A |
13: 105,218,702 (GRCm39) |
A12E |
unknown |
Het |
Ntng2 |
G |
A |
2: 29,087,069 (GRCm39) |
Q384* |
probably null |
Het |
Ocrl |
T |
A |
X: 47,050,993 (GRCm39) |
I74N |
probably damaging |
Het |
Or10j27 |
A |
G |
1: 172,958,382 (GRCm39) |
V134A |
probably benign |
Het |
Or13a22 |
A |
G |
7: 140,072,622 (GRCm39) |
S24G |
probably benign |
Het |
Or14j8 |
C |
T |
17: 38,263,276 (GRCm39) |
G213E |
possibly damaging |
Het |
Or1e22 |
A |
C |
11: 73,377,200 (GRCm39) |
V150G |
probably benign |
Het |
Or2j3 |
A |
T |
17: 38,616,203 (GRCm39) |
S50T |
probably benign |
Het |
Or2y1 |
A |
T |
11: 49,385,497 (GRCm39) |
I46F |
probably damaging |
Het |
Patj |
A |
G |
4: 98,379,827 (GRCm39) |
D151G |
probably benign |
Het |
Plpbp |
T |
C |
8: 27,539,259 (GRCm39) |
V126A |
probably damaging |
Het |
Pold2 |
A |
G |
11: 5,823,454 (GRCm39) |
L325P |
possibly damaging |
Het |
Ppp1r12c |
A |
C |
7: 4,486,650 (GRCm39) |
S480A |
probably damaging |
Het |
Pum1 |
T |
C |
4: 130,428,359 (GRCm39) |
S124P |
possibly damaging |
Het |
Pwp2 |
C |
G |
10: 78,014,925 (GRCm39) |
G353A |
probably damaging |
Het |
Reln |
C |
A |
5: 22,184,000 (GRCm39) |
Q1666H |
probably damaging |
Het |
Rnf19a |
T |
C |
15: 36,266,071 (GRCm39) |
I9V |
probably benign |
Het |
Ryr2 |
T |
C |
13: 11,784,764 (GRCm39) |
H1063R |
probably benign |
Het |
Samd14 |
C |
G |
11: 94,914,426 (GRCm39) |
D361E |
probably damaging |
Het |
Samd15 |
A |
T |
12: 87,248,617 (GRCm39) |
N365I |
probably damaging |
Het |
Sec16b |
A |
G |
1: 157,358,882 (GRCm39) |
H105R |
probably benign |
Het |
Sez6 |
T |
C |
11: 77,844,329 (GRCm39) |
S51P |
probably benign |
Het |
Sh3bp1 |
T |
A |
15: 78,789,350 (GRCm39) |
L236Q |
probably damaging |
Het |
Sspo |
C |
T |
6: 48,434,274 (GRCm39) |
T991I |
probably damaging |
Het |
Suco |
A |
T |
1: 161,687,069 (GRCm39) |
L97* |
probably null |
Het |
Tab1 |
C |
A |
15: 80,032,497 (GRCm39) |
R35S |
probably benign |
Het |
Tet3 |
C |
A |
6: 83,381,145 (GRCm39) |
S341I |
possibly damaging |
Het |
Tlr1 |
A |
T |
5: 65,083,043 (GRCm39) |
D511E |
probably benign |
Het |
Tmem132b |
A |
C |
5: 125,862,963 (GRCm39) |
D656A |
probably damaging |
Het |
Tmtc4 |
T |
A |
14: 123,179,400 (GRCm39) |
|
probably null |
Het |
Trmo |
T |
C |
4: 46,380,158 (GRCm39) |
T404A |
probably damaging |
Het |
Ulk4 |
C |
A |
9: 120,997,250 (GRCm39) |
R774M |
probably null |
Het |
Ush2a |
C |
T |
1: 188,184,015 (GRCm39) |
L1440F |
probably benign |
Het |
Usp16 |
A |
G |
16: 87,277,795 (GRCm39) |
K682E |
probably damaging |
Het |
Virma |
T |
C |
4: 11,540,511 (GRCm39) |
S1471P |
probably benign |
Het |
Vmn1r177 |
A |
T |
7: 23,565,111 (GRCm39) |
I255N |
probably damaging |
Het |
Vmn2r61 |
A |
T |
7: 41,916,076 (GRCm39) |
R230* |
probably null |
Het |
Vps13c |
T |
A |
9: 67,900,295 (GRCm39) |
F3671L |
probably benign |
Het |
Washc5 |
T |
C |
15: 59,231,189 (GRCm39) |
N358S |
possibly damaging |
Het |
Wdr72 |
A |
G |
9: 74,058,899 (GRCm39) |
K331E |
probably damaging |
Het |
Zfp986 |
A |
T |
4: 145,625,805 (GRCm39) |
K155I |
probably benign |
Het |
|
Other mutations in Trpm1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00093:Trpm1
|
APN |
7 |
63,893,198 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00465:Trpm1
|
APN |
7 |
63,897,215 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL01118:Trpm1
|
APN |
7 |
63,885,572 (GRCm39) |
missense |
probably benign |
0.24 |
IGL01148:Trpm1
|
APN |
7 |
63,893,312 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01303:Trpm1
|
APN |
7 |
63,860,578 (GRCm39) |
critical splice acceptor site |
probably benign |
0.00 |
IGL01432:Trpm1
|
APN |
7 |
63,884,767 (GRCm39) |
missense |
probably benign |
0.18 |
IGL01433:Trpm1
|
APN |
7 |
63,854,276 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01506:Trpm1
|
APN |
7 |
63,893,329 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01626:Trpm1
|
APN |
7 |
63,918,637 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01640:Trpm1
|
APN |
7 |
63,876,645 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01899:Trpm1
|
APN |
7 |
63,884,742 (GRCm39) |
missense |
probably benign |
0.24 |
IGL01959:Trpm1
|
APN |
7 |
63,858,723 (GRCm39) |
missense |
possibly damaging |
0.81 |
IGL02210:Trpm1
|
APN |
7 |
63,860,613 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02268:Trpm1
|
APN |
7 |
63,867,362 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL02331:Trpm1
|
APN |
7 |
63,884,800 (GRCm39) |
missense |
probably benign |
0.30 |
IGL02334:Trpm1
|
APN |
7 |
63,895,690 (GRCm39) |
critical splice acceptor site |
probably null |
|
IGL02407:Trpm1
|
APN |
7 |
63,868,869 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02425:Trpm1
|
APN |
7 |
63,890,175 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL02485:Trpm1
|
APN |
7 |
63,918,862 (GRCm39) |
missense |
possibly damaging |
0.52 |
IGL02635:Trpm1
|
APN |
7 |
63,848,972 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02640:Trpm1
|
APN |
7 |
63,868,881 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL02827:Trpm1
|
APN |
7 |
63,868,908 (GRCm39) |
missense |
probably null |
1.00 |
PIT4458001:Trpm1
|
UTSW |
7 |
63,918,309 (GRCm39) |
missense |
possibly damaging |
0.94 |
PIT4544001:Trpm1
|
UTSW |
7 |
63,848,998 (GRCm39) |
intron |
probably benign |
|
R0012:Trpm1
|
UTSW |
7 |
63,918,339 (GRCm39) |
missense |
possibly damaging |
0.88 |
R0014:Trpm1
|
UTSW |
7 |
63,897,970 (GRCm39) |
missense |
probably damaging |
1.00 |
R0056:Trpm1
|
UTSW |
7 |
63,893,334 (GRCm39) |
missense |
probably damaging |
1.00 |
R0445:Trpm1
|
UTSW |
7 |
63,894,590 (GRCm39) |
unclassified |
probably benign |
|
R0463:Trpm1
|
UTSW |
7 |
63,870,002 (GRCm39) |
missense |
probably benign |
0.05 |
R0469:Trpm1
|
UTSW |
7 |
63,873,506 (GRCm39) |
missense |
probably damaging |
1.00 |
R0510:Trpm1
|
UTSW |
7 |
63,873,506 (GRCm39) |
missense |
probably damaging |
1.00 |
R1301:Trpm1
|
UTSW |
7 |
63,852,801 (GRCm39) |
splice site |
probably null |
|
R1397:Trpm1
|
UTSW |
7 |
63,867,406 (GRCm39) |
missense |
probably damaging |
1.00 |
R1588:Trpm1
|
UTSW |
7 |
63,873,565 (GRCm39) |
missense |
possibly damaging |
0.93 |
R1618:Trpm1
|
UTSW |
7 |
63,890,283 (GRCm39) |
missense |
probably damaging |
1.00 |
R1724:Trpm1
|
UTSW |
7 |
63,885,569 (GRCm39) |
nonsense |
probably null |
|
R1827:Trpm1
|
UTSW |
7 |
63,884,755 (GRCm39) |
missense |
probably damaging |
1.00 |
R1829:Trpm1
|
UTSW |
7 |
63,876,530 (GRCm39) |
missense |
probably damaging |
1.00 |
R1864:Trpm1
|
UTSW |
7 |
63,917,764 (GRCm39) |
missense |
probably damaging |
1.00 |
R1895:Trpm1
|
UTSW |
7 |
63,873,556 (GRCm39) |
missense |
probably damaging |
1.00 |
R1946:Trpm1
|
UTSW |
7 |
63,873,556 (GRCm39) |
missense |
probably damaging |
1.00 |
R1959:Trpm1
|
UTSW |
7 |
63,879,978 (GRCm39) |
missense |
probably damaging |
1.00 |
R1960:Trpm1
|
UTSW |
7 |
63,879,978 (GRCm39) |
missense |
probably damaging |
1.00 |
R1980:Trpm1
|
UTSW |
7 |
63,858,182 (GRCm39) |
missense |
possibly damaging |
0.83 |
R1989:Trpm1
|
UTSW |
7 |
63,858,780 (GRCm39) |
intron |
probably null |
|
R2054:Trpm1
|
UTSW |
7 |
63,890,303 (GRCm39) |
missense |
possibly damaging |
0.69 |
R2156:Trpm1
|
UTSW |
7 |
63,884,736 (GRCm39) |
missense |
probably damaging |
1.00 |
R2251:Trpm1
|
UTSW |
7 |
63,859,724 (GRCm39) |
missense |
probably damaging |
1.00 |
R3051:Trpm1
|
UTSW |
7 |
63,918,849 (GRCm39) |
missense |
probably damaging |
1.00 |
R3148:Trpm1
|
UTSW |
7 |
63,884,760 (GRCm39) |
missense |
probably benign |
0.00 |
R3195:Trpm1
|
UTSW |
7 |
63,849,061 (GRCm39) |
nonsense |
probably null |
|
R3615:Trpm1
|
UTSW |
7 |
63,893,318 (GRCm39) |
missense |
probably damaging |
1.00 |
R3616:Trpm1
|
UTSW |
7 |
63,893,318 (GRCm39) |
missense |
probably damaging |
1.00 |
R3623:Trpm1
|
UTSW |
7 |
63,894,601 (GRCm39) |
missense |
probably damaging |
1.00 |
R3624:Trpm1
|
UTSW |
7 |
63,894,601 (GRCm39) |
missense |
probably damaging |
1.00 |
R3721:Trpm1
|
UTSW |
7 |
63,867,475 (GRCm39) |
intron |
probably benign |
|
R3822:Trpm1
|
UTSW |
7 |
63,867,451 (GRCm39) |
intron |
probably benign |
|
R4441:Trpm1
|
UTSW |
7 |
63,851,666 (GRCm39) |
missense |
probably damaging |
1.00 |
R4490:Trpm1
|
UTSW |
7 |
63,858,660 (GRCm39) |
nonsense |
probably null |
|
R4666:Trpm1
|
UTSW |
7 |
63,852,782 (GRCm39) |
missense |
probably damaging |
1.00 |
R4701:Trpm1
|
UTSW |
7 |
63,893,248 (GRCm39) |
missense |
probably damaging |
1.00 |
R4781:Trpm1
|
UTSW |
7 |
63,884,800 (GRCm39) |
missense |
probably benign |
0.30 |
R4811:Trpm1
|
UTSW |
7 |
63,858,054 (GRCm39) |
missense |
probably damaging |
1.00 |
R5017:Trpm1
|
UTSW |
7 |
63,894,580 (GRCm39) |
unclassified |
probably benign |
|
R5030:Trpm1
|
UTSW |
7 |
63,885,579 (GRCm39) |
missense |
probably damaging |
1.00 |
R5195:Trpm1
|
UTSW |
7 |
63,887,441 (GRCm39) |
missense |
possibly damaging |
0.84 |
R5238:Trpm1
|
UTSW |
7 |
63,918,702 (GRCm39) |
missense |
probably damaging |
1.00 |
R5304:Trpm1
|
UTSW |
7 |
63,858,694 (GRCm39) |
missense |
probably benign |
0.00 |
R5575:Trpm1
|
UTSW |
7 |
63,870,018 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5613:Trpm1
|
UTSW |
7 |
63,858,159 (GRCm39) |
missense |
probably damaging |
1.00 |
R5855:Trpm1
|
UTSW |
7 |
63,918,710 (GRCm39) |
nonsense |
probably null |
|
R5947:Trpm1
|
UTSW |
7 |
63,873,547 (GRCm39) |
missense |
probably benign |
0.07 |
R5988:Trpm1
|
UTSW |
7 |
63,876,553 (GRCm39) |
missense |
probably benign |
0.16 |
R6054:Trpm1
|
UTSW |
7 |
63,918,450 (GRCm39) |
missense |
probably benign |
0.00 |
R6088:Trpm1
|
UTSW |
7 |
63,917,724 (GRCm39) |
missense |
probably damaging |
0.98 |
R6259:Trpm1
|
UTSW |
7 |
63,918,226 (GRCm39) |
missense |
possibly damaging |
0.47 |
R6379:Trpm1
|
UTSW |
7 |
63,848,942 (GRCm39) |
missense |
probably benign |
0.00 |
R6380:Trpm1
|
UTSW |
7 |
63,918,045 (GRCm39) |
missense |
probably benign |
0.24 |
R6429:Trpm1
|
UTSW |
7 |
63,918,252 (GRCm39) |
missense |
probably benign |
0.00 |
R6600:Trpm1
|
UTSW |
7 |
63,803,781 (GRCm39) |
start codon destroyed |
probably null |
0.56 |
R6622:Trpm1
|
UTSW |
7 |
63,890,343 (GRCm39) |
missense |
probably damaging |
0.96 |
R6939:Trpm1
|
UTSW |
7 |
63,918,045 (GRCm39) |
missense |
probably benign |
0.03 |
R6944:Trpm1
|
UTSW |
7 |
63,893,181 (GRCm39) |
missense |
probably damaging |
1.00 |
R7025:Trpm1
|
UTSW |
7 |
63,876,462 (GRCm39) |
critical splice acceptor site |
probably null |
|
R7112:Trpm1
|
UTSW |
7 |
63,885,593 (GRCm39) |
missense |
probably damaging |
0.97 |
R7168:Trpm1
|
UTSW |
7 |
63,918,445 (GRCm39) |
missense |
probably benign |
0.01 |
R7219:Trpm1
|
UTSW |
7 |
63,854,333 (GRCm39) |
missense |
possibly damaging |
0.68 |
R7224:Trpm1
|
UTSW |
7 |
63,868,854 (GRCm39) |
critical splice acceptor site |
probably null |
|
R7285:Trpm1
|
UTSW |
7 |
63,859,729 (GRCm39) |
nonsense |
probably null |
|
R7367:Trpm1
|
UTSW |
7 |
63,918,549 (GRCm39) |
missense |
probably benign |
0.06 |
R7449:Trpm1
|
UTSW |
7 |
63,858,723 (GRCm39) |
missense |
probably benign |
0.14 |
R7466:Trpm1
|
UTSW |
7 |
63,890,330 (GRCm39) |
missense |
probably damaging |
0.99 |
R7498:Trpm1
|
UTSW |
7 |
63,858,657 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7581:Trpm1
|
UTSW |
7 |
63,854,303 (GRCm39) |
missense |
probably benign |
0.00 |
R7776:Trpm1
|
UTSW |
7 |
63,897,939 (GRCm39) |
missense |
probably benign |
0.04 |
R8062:Trpm1
|
UTSW |
7 |
63,851,689 (GRCm39) |
missense |
probably benign |
0.18 |
R8069:Trpm1
|
UTSW |
7 |
63,858,718 (GRCm39) |
missense |
possibly damaging |
0.55 |
R8157:Trpm1
|
UTSW |
7 |
63,849,017 (GRCm39) |
missense |
probably damaging |
1.00 |
R8219:Trpm1
|
UTSW |
7 |
63,851,699 (GRCm39) |
missense |
probably benign |
0.35 |
R8258:Trpm1
|
UTSW |
7 |
63,918,777 (GRCm39) |
missense |
probably benign |
0.10 |
R8259:Trpm1
|
UTSW |
7 |
63,918,777 (GRCm39) |
missense |
probably benign |
0.10 |
R8320:Trpm1
|
UTSW |
7 |
63,918,541 (GRCm39) |
missense |
possibly damaging |
0.56 |
R8536:Trpm1
|
UTSW |
7 |
63,897,155 (GRCm39) |
missense |
probably damaging |
1.00 |
R8544:Trpm1
|
UTSW |
7 |
63,874,356 (GRCm39) |
splice site |
probably null |
|
R8813:Trpm1
|
UTSW |
7 |
63,851,756 (GRCm39) |
missense |
possibly damaging |
0.68 |
R8912:Trpm1
|
UTSW |
7 |
63,918,628 (GRCm39) |
missense |
probably benign |
0.06 |
R8954:Trpm1
|
UTSW |
7 |
63,858,089 (GRCm39) |
missense |
probably damaging |
0.98 |
R9139:Trpm1
|
UTSW |
7 |
63,848,943 (GRCm39) |
missense |
probably benign |
0.00 |
R9205:Trpm1
|
UTSW |
7 |
63,890,319 (GRCm39) |
missense |
possibly damaging |
0.66 |
R9258:Trpm1
|
UTSW |
7 |
63,884,713 (GRCm39) |
missense |
probably benign |
0.01 |
R9283:Trpm1
|
UTSW |
7 |
63,873,623 (GRCm39) |
missense |
probably benign |
0.18 |
R9394:Trpm1
|
UTSW |
7 |
63,918,480 (GRCm39) |
missense |
probably benign |
0.00 |
R9430:Trpm1
|
UTSW |
7 |
63,873,446 (GRCm39) |
missense |
probably benign |
0.38 |
R9537:Trpm1
|
UTSW |
7 |
63,803,616 (GRCm39) |
unclassified |
probably benign |
|
R9616:Trpm1
|
UTSW |
7 |
63,858,132 (GRCm39) |
missense |
probably damaging |
0.99 |
R9774:Trpm1
|
UTSW |
7 |
63,898,041 (GRCm39) |
missense |
possibly damaging |
0.90 |
X0026:Trpm1
|
UTSW |
7 |
63,918,658 (GRCm39) |
missense |
probably benign |
0.05 |
Z1176:Trpm1
|
UTSW |
7 |
63,854,342 (GRCm39) |
critical splice donor site |
probably null |
|
Z1176:Trpm1
|
UTSW |
7 |
63,852,879 (GRCm39) |
critical splice donor site |
probably null |
|
Z1177:Trpm1
|
UTSW |
7 |
63,867,439 (GRCm39) |
missense |
unknown |
|
|
Predicted Primers |
PCR Primer
(F):5'- CTGTGGAGCTGTTAGACCAGTC -3'
(R):5'- AGACTTCACTGTGCTGCTCAG -3'
Sequencing Primer
(F):5'- GAGCTGTTAGACCAGTCTTACAAGC -3'
(R):5'- ACTGTGCTGCTCAGAATGC -3'
|
Posted On |
2014-06-23 |