Incidental Mutation 'R1839:Ifi213'
ID 205564
Institutional Source Beutler Lab
Gene Symbol Ifi213
Ensembl Gene ENSMUSG00000073491
Gene Name interferon activated gene 213
Synonyms Pyr-A, Pydc4, E030037K03Rik
MMRRC Submission 045015-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.060) question?
Stock # R1839 (G1)
Quality Score 225
Status Validated
Chromosome 1
Chromosomal Location 173393849-173426840 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 173417166 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Isoleucine to Methionine at position 415 (I415M)
Ref Sequence ENSEMBL: ENSMUSP00000117222 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000097462] [ENSMUST00000150649] [ENSMUST00000180215]
AlphaFold D3Z5G0
Predicted Effect probably benign
Transcript: ENSMUST00000097462
SMART Domains Protein: ENSMUSP00000095070
Gene: ENSMUSG00000073491

DomainStartEndE-ValueType
PYRIN 10 88 3.71e-20 SMART
low complexity region 101 112 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000150649
AA Change: I415M

PolyPhen 2 Score 0.976 (Sensitivity: 0.76; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000117222
Gene: ENSMUSG00000073491
AA Change: I415M

DomainStartEndE-ValueType
PYRIN 10 88 3.71e-20 SMART
low complexity region 101 112 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000180215
SMART Domains Protein: ENSMUSP00000136238
Gene: ENSMUSG00000073491

DomainStartEndE-ValueType
PYRIN 10 88 3.71e-20 SMART
low complexity region 101 112 N/A INTRINSIC
Meta Mutation Damage Score 0.6467 question?
Coding Region Coverage
  • 1x: 97.4%
  • 3x: 96.7%
  • 10x: 94.7%
  • 20x: 90.6%
Validation Efficiency 98% (90/92)
Allele List at MGI
Other mutations in this stock
Total: 84 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700006A11Rik T C 3: 124,203,369 (GRCm39) T403A probably damaging Het
Acat3 T A 17: 13,147,493 (GRCm39) R175* probably null Het
Adam1b C A 5: 121,639,104 (GRCm39) C647F probably damaging Het
Adam28 T C 14: 68,876,659 (GRCm39) N197S possibly damaging Het
Adcy2 C T 13: 68,837,380 (GRCm39) probably null Het
Adcy5 A T 16: 35,069,310 (GRCm39) N426I probably damaging Het
Adgre1 T C 17: 57,748,299 (GRCm39) S500P probably benign Het
Aloxe3 A G 11: 69,020,911 (GRCm39) Y212C probably damaging Het
Ap3d1 A G 10: 80,562,942 (GRCm39) S180P probably damaging Het
Arhgap20 C T 9: 51,760,626 (GRCm39) R790W probably damaging Het
Atp8b4 C A 2: 126,203,702 (GRCm39) A757S possibly damaging Het
Begain G A 12: 109,001,249 (GRCm39) probably benign Het
Ccdc141 T C 2: 76,842,009 (GRCm39) E1474G probably benign Het
Ccdc88b A G 19: 6,831,477 (GRCm39) probably benign Het
Ccnk A G 12: 108,161,333 (GRCm39) T195A probably damaging Het
Cd55b C A 1: 130,341,842 (GRCm39) C265F probably damaging Het
Celsr3 A G 9: 108,707,105 (GRCm39) H1196R probably benign Het
Cenpt T C 8: 106,575,646 (GRCm39) S190G possibly damaging Het
Chd8 T C 14: 52,442,340 (GRCm39) S2077G probably benign Het
Col6a5 G A 9: 105,742,032 (GRCm39) H2296Y probably benign Het
Cxxc4 C A 3: 133,946,414 (GRCm39) H332N probably damaging Het
Cyp24a1 T C 2: 170,338,661 (GRCm39) I12V probably benign Het
Cyp3a57 T A 5: 145,318,111 (GRCm39) L364Q probably damaging Het
Ddi2 T C 4: 141,440,837 (GRCm39) I47V probably benign Het
Ddx5 A T 11: 106,675,723 (GRCm39) D322E probably benign Het
Dhx40 A G 11: 86,680,123 (GRCm39) C405R possibly damaging Het
Emc1 T C 4: 139,087,796 (GRCm39) F100S probably damaging Het
Exoc2 T C 13: 31,090,480 (GRCm39) probably benign Het
Gm10110 A T 14: 90,135,272 (GRCm39) noncoding transcript Het
Gm17332 T C 11: 31,132,386 (GRCm39) H26R possibly damaging Het
Gna12 T C 5: 140,748,367 (GRCm39) N183S probably benign Het
Gpx6 A G 13: 21,496,497 (GRCm39) N24D probably benign Het
Gsdma3 C T 11: 98,520,684 (GRCm39) A105V probably benign Het
Hsd3b5 T C 3: 98,527,044 (GRCm39) Y134C probably benign Het
Ints9 C A 14: 65,253,979 (GRCm39) P278T probably damaging Het
Krt79 C T 15: 101,846,373 (GRCm39) E192K possibly damaging Het
Lrrk2 A G 15: 91,567,337 (GRCm39) N132S probably benign Het
Ltn1 T A 16: 87,213,152 (GRCm39) K470* probably null Het
Magi2 A T 5: 20,670,825 (GRCm39) T163S probably damaging Het
Mcm9 A G 10: 53,417,649 (GRCm39) M18T probably damaging Het
Med12l A G 3: 58,975,740 (GRCm39) T212A probably benign Het
Mfhas1 T C 8: 36,058,012 (GRCm39) L829P possibly damaging Het
Mgme1 T A 2: 144,121,407 (GRCm39) C288S probably benign Het
Muc4 G C 16: 32,753,919 (GRCm38) R1265P probably benign Het
Myh7 T C 14: 55,210,637 (GRCm39) N1725S possibly damaging Het
Naa80 G A 9: 107,460,216 (GRCm39) R37H possibly damaging Het
Nme4 A T 17: 26,311,071 (GRCm39) W165R probably damaging Het
Nup205 T A 6: 35,196,649 (GRCm39) D1128E probably benign Het
Or2t48 A T 11: 58,420,199 (GRCm39) Y204* probably null Het
Or5ae2 T C 7: 84,505,756 (GRCm39) Y60H probably damaging Het
Pcdh1 T C 18: 38,332,538 (GRCm39) D155G possibly damaging Het
Pex12 A T 11: 83,188,648 (GRCm39) S116T probably damaging Het
Plekhh1 C T 12: 79,125,731 (GRCm39) probably benign Het
Plekhh3 A G 11: 101,054,426 (GRCm39) probably benign Het
Pnpt1 T C 11: 29,104,342 (GRCm39) M572T possibly damaging Het
Ppp1r12b T C 1: 134,765,719 (GRCm39) R667G probably benign Het
Rbpms2 ACTGCTGCTGCTGCTGC ACTGCTGCTGCTGCTGCTGC 9: 65,558,948 (GRCm39) probably benign Het
Rgs14 T C 13: 55,530,651 (GRCm39) probably benign Het
Rhbdf2 A T 11: 116,491,017 (GRCm39) V645E possibly damaging Het
Robo3 A G 9: 37,333,623 (GRCm39) V696A probably benign Het
Sall1 A G 8: 89,755,344 (GRCm39) F1212L possibly damaging Het
Sdc4 T C 2: 164,270,932 (GRCm39) E109G probably benign Het
Serpind1 G T 16: 17,160,856 (GRCm39) R462L probably damaging Het
Smad9 CTTT CTT 3: 54,696,600 (GRCm39) probably benign Het
Sstr4 C A 2: 148,237,453 (GRCm39) N21K probably benign Het
Tap1 C T 17: 34,407,083 (GRCm39) A77V possibly damaging Het
Thap4 T C 1: 93,678,009 (GRCm39) E259G probably benign Het
Thra A G 11: 98,646,969 (GRCm39) N30S probably benign Het
Tmem207 A T 16: 26,343,571 (GRCm39) V27E possibly damaging Het
Top3a A G 11: 60,644,714 (GRCm39) V305A probably damaging Het
Trim59 A T 3: 68,944,971 (GRCm39) I123K probably damaging Het
Ttn T C 2: 76,691,839 (GRCm39) probably benign Het
Ubac1 T A 2: 25,897,750 (GRCm39) E290V possibly damaging Het
Unc13b T C 4: 43,258,308 (GRCm39) probably benign Het
Uri1 A T 7: 37,666,814 (GRCm39) D206E probably benign Het
Utp4 A G 8: 107,640,086 (GRCm39) H465R probably benign Het
Uvssa T C 5: 33,547,096 (GRCm39) S221P probably benign Het
Vmn1r39 T C 6: 66,782,217 (GRCm39) probably null Het
Vps39 A T 2: 120,155,878 (GRCm39) L514H probably damaging Het
Vps72 G A 3: 95,026,529 (GRCm39) R158Q possibly damaging Het
Wdr59 T C 8: 112,211,972 (GRCm39) D366G probably benign Het
Zfp366 C A 13: 99,365,000 (GRCm39) Q54K probably damaging Het
Zfp523 T A 17: 28,413,967 (GRCm39) I34N probably damaging Het
Zfp974 G A 7: 27,609,781 (GRCm39) P648L possibly damaging Het
Other mutations in Ifi213
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00678:Ifi213 APN 1 173,421,619 (GRCm39) splice site probably benign
IGL00908:Ifi213 APN 1 173,422,649 (GRCm39) missense probably damaging 1.00
IGL00964:Ifi213 APN 1 173,421,518 (GRCm39) missense possibly damaging 0.91
IGL02217:Ifi213 APN 1 173,422,598 (GRCm39) missense possibly damaging 0.91
R0709:Ifi213 UTSW 1 173,417,366 (GRCm39) missense possibly damaging 0.70
R1518:Ifi213 UTSW 1 173,417,229 (GRCm39) missense probably damaging 0.99
R1559:Ifi213 UTSW 1 173,394,784 (GRCm39) missense probably benign 0.18
R1822:Ifi213 UTSW 1 173,417,408 (GRCm39) missense probably damaging 0.99
R1989:Ifi213 UTSW 1 173,396,374 (GRCm39) critical splice donor site probably null
R2108:Ifi213 UTSW 1 173,396,668 (GRCm39) critical splice acceptor site probably null
R2696:Ifi213 UTSW 1 173,417,590 (GRCm39) missense probably benign
R3890:Ifi213 UTSW 1 173,394,822 (GRCm39) missense probably benign 0.33
R4544:Ifi213 UTSW 1 173,409,693 (GRCm39) splice site probably null
R4611:Ifi213 UTSW 1 173,417,480 (GRCm39) missense possibly damaging 0.91
R4689:Ifi213 UTSW 1 173,417,986 (GRCm39) missense possibly damaging 0.92
R4710:Ifi213 UTSW 1 173,394,738 (GRCm39) utr 3 prime probably benign
R5126:Ifi213 UTSW 1 173,417,581 (GRCm39) missense possibly damaging 0.85
R5472:Ifi213 UTSW 1 173,394,838 (GRCm39) splice site probably null
R5625:Ifi213 UTSW 1 173,396,629 (GRCm39) missense possibly damaging 0.73
R5789:Ifi213 UTSW 1 173,396,360 (GRCm39) splice site probably benign
R5898:Ifi213 UTSW 1 173,396,545 (GRCm39) missense probably benign 0.01
R6025:Ifi213 UTSW 1 173,422,800 (GRCm39) missense probably damaging 0.99
R6149:Ifi213 UTSW 1 173,421,581 (GRCm39) missense probably benign 0.18
R6348:Ifi213 UTSW 1 173,417,848 (GRCm39) missense possibly damaging 0.46
R6564:Ifi213 UTSW 1 173,422,862 (GRCm39) start codon destroyed probably null 0.06
R7254:Ifi213 UTSW 1 173,421,529 (GRCm39) missense probably damaging 0.98
R7292:Ifi213 UTSW 1 173,422,691 (GRCm39) missense probably damaging 0.99
R7752:Ifi213 UTSW 1 173,394,784 (GRCm39) missense probably benign 0.18
R7901:Ifi213 UTSW 1 173,394,784 (GRCm39) missense probably benign 0.18
R8100:Ifi213 UTSW 1 173,422,748 (GRCm39) missense probably damaging 1.00
R8352:Ifi213 UTSW 1 173,422,835 (GRCm39) missense possibly damaging 0.92
R8425:Ifi213 UTSW 1 173,417,426 (GRCm39) missense probably benign
R8452:Ifi213 UTSW 1 173,422,835 (GRCm39) missense possibly damaging 0.92
R9357:Ifi213 UTSW 1 173,396,392 (GRCm39) missense probably benign 0.01
RF010:Ifi213 UTSW 1 173,409,719 (GRCm39) missense probably damaging 0.98
Predicted Primers PCR Primer
(F):5'- TTTAGGAAGGACCGCAAATCATATG -3'
(R):5'- TGAACCTAGCAGCAATGACC -3'

Sequencing Primer
(F):5'- GCCAGTCATTACCTTGAGT -3'
(R):5'- CCTAGCAGCAATGACCATTGG -3'
Posted On 2014-06-23