Incidental Mutation 'R1851:Rapgef6'
ID |
208110 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Rapgef6
|
Ensembl Gene |
ENSMUSG00000037533 |
Gene Name |
Rap guanine nucleotide exchange factor (GEF) 6 |
Synonyms |
PDZ-GEF2, C030018K18Rik, Pdzgef2, RA-GEF-2 |
MMRRC Submission |
039875-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R1851 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
11 |
Chromosomal Location |
54413673-54590111 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to A
at 54533637 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Aspartic acid to Glutamic Acid
at position 362
(D362E)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000104522
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000094536]
[ENSMUST00000101206]
[ENSMUST00000102743]
[ENSMUST00000108894]
[ENSMUST00000207429]
[ENSMUST00000218995]
|
AlphaFold |
Q5NCJ1 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000094536
AA Change: D362E
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
SMART Domains |
Protein: ENSMUSP00000092114 Gene: ENSMUSG00000037533 AA Change: D362E
Domain | Start | End | E-Value | Type |
cNMP
|
1 |
113 |
6.64e-7 |
SMART |
RasGEFN
|
127 |
240 |
4.35e-33 |
SMART |
PDZ
|
255 |
327 |
8.86e-16 |
SMART |
low complexity region
|
409 |
420 |
N/A |
INTRINSIC |
RA
|
464 |
550 |
1.47e-20 |
SMART |
RasGEF
|
571 |
853 |
3.88e-84 |
SMART |
low complexity region
|
944 |
957 |
N/A |
INTRINSIC |
low complexity region
|
972 |
989 |
N/A |
INTRINSIC |
low complexity region
|
1016 |
1061 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000101206
AA Change: D647E
PolyPhen 2
Score 0.003 (Sensitivity: 0.98; Specificity: 0.44)
|
SMART Domains |
Protein: ENSMUSP00000098766 Gene: ENSMUSG00000037533 AA Change: D647E
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
10 |
82 |
1.45e-5 |
PROSPERO |
low complexity region
|
187 |
205 |
N/A |
INTRINSIC |
low complexity region
|
231 |
239 |
N/A |
INTRINSIC |
cNMP
|
280 |
398 |
4.8e-13 |
SMART |
RasGEFN
|
412 |
525 |
4.35e-33 |
SMART |
PDZ
|
540 |
612 |
8.86e-16 |
SMART |
low complexity region
|
694 |
705 |
N/A |
INTRINSIC |
RA
|
749 |
835 |
1.47e-20 |
SMART |
RasGEF
|
856 |
1095 |
5.35e-87 |
SMART |
low complexity region
|
1237 |
1250 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1293 |
N/A |
INTRINSIC |
low complexity region
|
1345 |
1364 |
N/A |
INTRINSIC |
low complexity region
|
1368 |
1380 |
N/A |
INTRINSIC |
low complexity region
|
1444 |
1452 |
N/A |
INTRINSIC |
low complexity region
|
1555 |
1568 |
N/A |
INTRINSIC |
low complexity region
|
1591 |
1604 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000102743
AA Change: D647E
PolyPhen 2
Score 0.003 (Sensitivity: 0.98; Specificity: 0.44)
|
SMART Domains |
Protein: ENSMUSP00000099804 Gene: ENSMUSG00000037533 AA Change: D647E
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
10 |
82 |
1.42e-5 |
PROSPERO |
low complexity region
|
187 |
205 |
N/A |
INTRINSIC |
low complexity region
|
231 |
239 |
N/A |
INTRINSIC |
cNMP
|
280 |
398 |
4.8e-13 |
SMART |
RasGEFN
|
412 |
525 |
4.35e-33 |
SMART |
PDZ
|
540 |
612 |
8.86e-16 |
SMART |
low complexity region
|
694 |
705 |
N/A |
INTRINSIC |
RA
|
749 |
835 |
1.47e-20 |
SMART |
RasGEF
|
856 |
1138 |
3.88e-84 |
SMART |
low complexity region
|
1229 |
1242 |
N/A |
INTRINSIC |
low complexity region
|
1262 |
1285 |
N/A |
INTRINSIC |
low complexity region
|
1337 |
1356 |
N/A |
INTRINSIC |
low complexity region
|
1360 |
1372 |
N/A |
INTRINSIC |
low complexity region
|
1436 |
1444 |
N/A |
INTRINSIC |
low complexity region
|
1547 |
1560 |
N/A |
INTRINSIC |
low complexity region
|
1583 |
1596 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000108894
AA Change: D362E
PolyPhen 2
Score 0.008 (Sensitivity: 0.96; Specificity: 0.76)
|
SMART Domains |
Protein: ENSMUSP00000104522 Gene: ENSMUSG00000037533 AA Change: D362E
Domain | Start | End | E-Value | Type |
cNMP
|
1 |
113 |
6.64e-7 |
SMART |
RasGEFN
|
127 |
240 |
4.35e-33 |
SMART |
PDZ
|
255 |
327 |
8.86e-16 |
SMART |
low complexity region
|
409 |
420 |
N/A |
INTRINSIC |
RA
|
464 |
550 |
1.47e-20 |
SMART |
RasGEF
|
571 |
810 |
5.35e-87 |
SMART |
low complexity region
|
952 |
965 |
N/A |
INTRINSIC |
low complexity region
|
980 |
997 |
N/A |
INTRINSIC |
low complexity region
|
1024 |
1069 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000149372
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000207429
AA Change: D647E
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000218995
AA Change: D500E
PolyPhen 2
Score 0.006 (Sensitivity: 0.97; Specificity: 0.75)
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000220269
|
Coding Region Coverage |
- 1x: 97.4%
- 3x: 96.8%
- 10x: 94.9%
- 20x: 91.3%
|
Validation Efficiency |
|
MGI Phenotype |
PHENOTYPE: Mice homozygous for a null allele exhibit an inlarged spleen, increased IgE and IgG levels and altered cytokine production. [provided by MGI curators]
|
Allele List at MGI |
All alleles(16) : Targeted, knock-out(1) Targeted, other(2) Gene trapped(13) |
Other mutations in this stock |
Total: 95 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
5730507C01Rik |
A |
G |
12: 18,583,687 (GRCm39) |
E225G |
possibly damaging |
Het |
Abcb7 |
T |
C |
X: 103,349,005 (GRCm39) |
M153V |
probably benign |
Het |
Abi1 |
A |
T |
2: 22,840,276 (GRCm39) |
V329D |
possibly damaging |
Het |
Ablim3 |
G |
A |
18: 61,982,466 (GRCm39) |
H160Y |
probably benign |
Het |
Acox3 |
A |
T |
5: 35,766,406 (GRCm39) |
D624V |
possibly damaging |
Het |
Adam6b |
A |
G |
12: 113,455,442 (GRCm39) |
D753G |
probably benign |
Het |
Ago1 |
C |
A |
4: 126,333,788 (GRCm39) |
R771L |
probably benign |
Het |
Aktip |
A |
G |
8: 91,852,505 (GRCm39) |
V217A |
possibly damaging |
Het |
Ankk1 |
A |
C |
9: 49,327,150 (GRCm39) |
H676Q |
probably benign |
Het |
Arl1 |
G |
C |
10: 88,569,408 (GRCm39) |
|
probably benign |
Het |
Asxl3 |
T |
A |
18: 22,650,796 (GRCm39) |
D928E |
probably damaging |
Het |
AW209491 |
T |
C |
13: 14,811,318 (GRCm39) |
V57A |
possibly damaging |
Het |
B3galt4 |
G |
T |
17: 34,169,885 (GRCm39) |
Q118K |
probably benign |
Het |
Ccdc187 |
A |
T |
2: 26,166,080 (GRCm39) |
M783K |
probably benign |
Het |
Cdon |
T |
G |
9: 35,394,454 (GRCm39) |
M900R |
probably damaging |
Het |
Ceacam5 |
G |
A |
7: 17,448,835 (GRCm39) |
W67* |
probably null |
Het |
Chd5 |
A |
G |
4: 152,462,727 (GRCm39) |
S1356G |
probably damaging |
Het |
Chil3 |
C |
T |
3: 106,056,117 (GRCm39) |
|
probably null |
Het |
Chmp7 |
C |
T |
14: 69,956,899 (GRCm39) |
M336I |
probably benign |
Het |
Cntn1 |
C |
T |
15: 92,203,021 (GRCm39) |
R768C |
probably damaging |
Het |
Col6a3 |
T |
A |
1: 90,735,256 (GRCm39) |
I798F |
possibly damaging |
Het |
Cpxcr1 |
T |
A |
X: 115,387,758 (GRCm39) |
L223* |
probably null |
Het |
Cpz |
C |
A |
5: 35,659,902 (GRCm39) |
R581L |
possibly damaging |
Het |
Cxcr2 |
A |
G |
1: 74,198,438 (GRCm39) |
I311V |
probably benign |
Het |
Cym |
T |
A |
3: 107,126,030 (GRCm39) |
I78F |
probably benign |
Het |
Defb8 |
A |
T |
8: 19,495,899 (GRCm39) |
S54T |
probably benign |
Het |
Dennd4a |
A |
G |
9: 64,769,312 (GRCm39) |
T433A |
probably damaging |
Het |
Dhx29 |
A |
G |
13: 113,084,815 (GRCm39) |
T678A |
probably damaging |
Het |
Dspp |
T |
C |
5: 104,321,951 (GRCm39) |
|
probably null |
Het |
Enkur |
G |
T |
2: 21,193,988 (GRCm39) |
A195E |
probably benign |
Het |
Ero1b |
T |
A |
13: 12,619,292 (GRCm39) |
S429T |
possibly damaging |
Het |
Fh1 |
A |
G |
1: 175,435,452 (GRCm39) |
S344P |
probably damaging |
Het |
Flnc |
G |
T |
6: 29,443,478 (GRCm39) |
G553V |
probably damaging |
Het |
Fmo1 |
A |
T |
1: 162,657,554 (GRCm39) |
L529* |
probably null |
Het |
Frem1 |
C |
A |
4: 82,868,737 (GRCm39) |
V1415F |
probably damaging |
Het |
Gatb |
T |
G |
3: 85,526,184 (GRCm39) |
L354R |
probably damaging |
Het |
Gdpgp1 |
A |
T |
7: 79,888,349 (GRCm39) |
N127Y |
probably damaging |
Het |
Gpat2 |
A |
G |
2: 127,276,739 (GRCm39) |
T648A |
possibly damaging |
Het |
Grk6 |
C |
T |
13: 55,599,591 (GRCm39) |
R225* |
probably null |
Het |
Hells |
A |
T |
19: 38,948,120 (GRCm39) |
Q682L |
probably null |
Het |
Hspa5 |
T |
A |
2: 34,664,690 (GRCm39) |
N381K |
possibly damaging |
Het |
Ighmbp2 |
T |
C |
19: 3,312,075 (GRCm39) |
N893S |
probably benign |
Het |
Ipo11 |
A |
T |
13: 106,948,765 (GRCm39) |
V914E |
possibly damaging |
Het |
Lars1 |
T |
C |
18: 42,345,673 (GRCm39) |
N1001S |
probably benign |
Het |
Lats2 |
A |
G |
14: 57,934,912 (GRCm39) |
L606P |
probably damaging |
Het |
Map4k1 |
T |
C |
7: 28,699,209 (GRCm39) |
Y521H |
probably benign |
Het |
Marchf11 |
T |
A |
15: 26,387,916 (GRCm39) |
V257E |
probably damaging |
Het |
Med23 |
G |
A |
10: 24,786,768 (GRCm39) |
|
probably null |
Het |
Meltf |
A |
G |
16: 31,715,395 (GRCm39) |
D696G |
probably benign |
Het |
Ms4a7 |
T |
A |
19: 11,301,788 (GRCm39) |
M212L |
probably benign |
Het |
Mx1 |
A |
T |
16: 97,249,403 (GRCm39) |
L608Q |
probably damaging |
Het |
Myh1 |
T |
C |
11: 67,095,224 (GRCm39) |
Y195H |
probably damaging |
Het |
Napb |
G |
T |
2: 148,548,909 (GRCm39) |
H110Q |
probably benign |
Het |
Ngly1 |
C |
T |
14: 16,260,585 (GRCm38) |
P90S |
probably damaging |
Het |
Nlrp1b |
T |
A |
11: 71,073,442 (GRCm39) |
I134L |
possibly damaging |
Het |
Nup210 |
A |
G |
6: 90,993,036 (GRCm39) |
L1017P |
probably damaging |
Het |
Nup85 |
T |
A |
11: 115,472,643 (GRCm39) |
I233N |
probably damaging |
Het |
Obsl1 |
A |
G |
1: 75,469,537 (GRCm39) |
V965A |
probably damaging |
Het |
Or4c12 |
A |
C |
2: 89,774,158 (GRCm39) |
Y100* |
probably null |
Het |
Or4f6 |
T |
C |
2: 111,839,036 (GRCm39) |
D165G |
probably benign |
Het |
Or6c5c |
T |
C |
10: 129,299,370 (GRCm39) |
L275P |
probably damaging |
Het |
Pak1ip1 |
A |
G |
13: 41,164,708 (GRCm39) |
T264A |
possibly damaging |
Het |
Pard6g |
C |
T |
18: 80,160,357 (GRCm39) |
R157C |
probably damaging |
Het |
Pcdhb7 |
A |
T |
18: 37,475,631 (GRCm39) |
T256S |
possibly damaging |
Het |
Phrf1 |
T |
C |
7: 140,820,831 (GRCm39) |
F153L |
probably damaging |
Het |
Pigw |
A |
T |
11: 84,768,874 (GRCm39) |
F152I |
probably damaging |
Het |
Pip4k2c |
A |
G |
10: 127,036,744 (GRCm39) |
S222P |
probably damaging |
Het |
Pjvk |
A |
G |
2: 76,487,775 (GRCm39) |
|
probably null |
Het |
Plxnd1 |
C |
T |
6: 115,940,875 (GRCm39) |
V1355M |
probably damaging |
Het |
Pramel26 |
T |
C |
4: 143,539,396 (GRCm39) |
I32M |
probably benign |
Het |
Prss22 |
G |
A |
17: 24,215,288 (GRCm39) |
P163S |
probably damaging |
Het |
Prune2 |
A |
G |
19: 17,176,503 (GRCm39) |
I154V |
probably damaging |
Het |
Retreg2 |
A |
G |
1: 75,123,319 (GRCm39) |
K416E |
probably benign |
Het |
Scn7a |
T |
C |
2: 66,510,635 (GRCm39) |
I1256V |
probably benign |
Het |
Sema4d |
A |
G |
13: 51,865,258 (GRCm39) |
V362A |
possibly damaging |
Het |
Septin4 |
T |
A |
11: 87,459,741 (GRCm39) |
D496E |
probably damaging |
Het |
Slc25a34 |
G |
A |
4: 141,349,579 (GRCm39) |
T192I |
probably benign |
Het |
Tacc3 |
G |
T |
5: 33,825,544 (GRCm39) |
V425L |
probably benign |
Het |
Tfdp2 |
A |
T |
9: 96,179,762 (GRCm39) |
K125I |
probably damaging |
Het |
Tjp2 |
C |
T |
19: 24,076,899 (GRCm39) |
R952Q |
possibly damaging |
Het |
Tk2 |
G |
T |
8: 104,975,077 (GRCm39) |
S30* |
probably null |
Het |
Tmem74 |
A |
T |
15: 43,730,559 (GRCm39) |
D161E |
probably benign |
Het |
Tmprss9 |
G |
A |
10: 80,728,119 (GRCm39) |
V570M |
probably damaging |
Het |
Tnk2 |
C |
A |
16: 32,498,280 (GRCm39) |
P26Q |
probably damaging |
Het |
Tnpo2 |
T |
G |
8: 85,778,401 (GRCm39) |
V610G |
probably damaging |
Het |
Trim37 |
T |
C |
11: 87,109,132 (GRCm39) |
F953S |
probably damaging |
Het |
U2surp |
T |
A |
9: 95,364,150 (GRCm39) |
K589* |
probably null |
Het |
Usp2 |
G |
A |
9: 43,987,263 (GRCm39) |
R187H |
probably benign |
Het |
Vmn2r1 |
C |
T |
3: 64,008,926 (GRCm39) |
T535I |
probably benign |
Het |
Wdr20rt |
T |
A |
12: 65,273,925 (GRCm39) |
S463T |
possibly damaging |
Het |
Zbtb25 |
C |
A |
12: 76,396,488 (GRCm39) |
G245W |
probably damaging |
Het |
Zc3h14 |
T |
A |
12: 98,726,613 (GRCm39) |
L27* |
probably null |
Het |
Zfp2 |
T |
C |
11: 50,791,915 (GRCm39) |
K43E |
probably benign |
Het |
Zfp268 |
T |
G |
4: 145,350,820 (GRCm39) |
|
probably benign |
Het |
Zfp654 |
A |
G |
16: 64,605,491 (GRCm39) |
Y904H |
probably benign |
Het |
|
Other mutations in Rapgef6 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00436:Rapgef6
|
APN |
11 |
54,570,091 (GRCm39) |
missense |
probably benign |
0.00 |
IGL00507:Rapgef6
|
APN |
11 |
54,554,935 (GRCm39) |
nonsense |
probably null |
|
IGL00809:Rapgef6
|
APN |
11 |
54,540,126 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00843:Rapgef6
|
APN |
11 |
54,582,099 (GRCm39) |
missense |
probably benign |
0.03 |
IGL00899:Rapgef6
|
APN |
11 |
54,510,844 (GRCm39) |
nonsense |
probably null |
|
IGL01372:Rapgef6
|
APN |
11 |
54,559,437 (GRCm39) |
splice site |
probably benign |
|
IGL01604:Rapgef6
|
APN |
11 |
54,585,389 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01935:Rapgef6
|
APN |
11 |
54,501,668 (GRCm39) |
missense |
possibly damaging |
0.78 |
IGL01991:Rapgef6
|
APN |
11 |
54,443,695 (GRCm39) |
missense |
probably benign |
0.37 |
IGL02243:Rapgef6
|
APN |
11 |
54,567,226 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02407:Rapgef6
|
APN |
11 |
54,567,181 (GRCm39) |
missense |
possibly damaging |
0.91 |
IGL02676:Rapgef6
|
APN |
11 |
54,540,172 (GRCm39) |
unclassified |
probably benign |
|
IGL02934:Rapgef6
|
APN |
11 |
54,516,690 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03076:Rapgef6
|
APN |
11 |
54,516,793 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03110:Rapgef6
|
APN |
11 |
54,586,915 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL03256:Rapgef6
|
APN |
11 |
54,548,255 (GRCm39) |
missense |
probably damaging |
1.00 |
shocker
|
UTSW |
11 |
54,510,842 (GRCm39) |
missense |
probably damaging |
1.00 |
D4216:Rapgef6
|
UTSW |
11 |
54,559,572 (GRCm39) |
splice site |
probably benign |
|
PIT4305001:Rapgef6
|
UTSW |
11 |
54,570,203 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4366001:Rapgef6
|
UTSW |
11 |
54,582,446 (GRCm39) |
missense |
probably damaging |
0.98 |
R0047:Rapgef6
|
UTSW |
11 |
54,437,204 (GRCm39) |
missense |
possibly damaging |
0.65 |
R0047:Rapgef6
|
UTSW |
11 |
54,437,204 (GRCm39) |
missense |
possibly damaging |
0.65 |
R0125:Rapgef6
|
UTSW |
11 |
54,516,701 (GRCm39) |
nonsense |
probably null |
|
R0189:Rapgef6
|
UTSW |
11 |
54,582,075 (GRCm39) |
missense |
probably benign |
|
R0201:Rapgef6
|
UTSW |
11 |
54,510,767 (GRCm39) |
missense |
probably damaging |
1.00 |
R0505:Rapgef6
|
UTSW |
11 |
54,516,789 (GRCm39) |
missense |
probably benign |
0.00 |
R0524:Rapgef6
|
UTSW |
11 |
54,581,110 (GRCm39) |
missense |
probably benign |
0.32 |
R0853:Rapgef6
|
UTSW |
11 |
54,559,503 (GRCm39) |
missense |
probably damaging |
1.00 |
R1203:Rapgef6
|
UTSW |
11 |
54,582,525 (GRCm39) |
missense |
probably benign |
0.09 |
R1440:Rapgef6
|
UTSW |
11 |
54,517,534 (GRCm39) |
missense |
probably damaging |
1.00 |
R1453:Rapgef6
|
UTSW |
11 |
54,530,553 (GRCm39) |
splice site |
probably null |
|
R1530:Rapgef6
|
UTSW |
11 |
54,552,009 (GRCm39) |
missense |
probably damaging |
1.00 |
R1593:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1620:Rapgef6
|
UTSW |
11 |
54,517,420 (GRCm39) |
missense |
possibly damaging |
0.88 |
R1628:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1629:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1630:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1634:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1640:Rapgef6
|
UTSW |
11 |
54,548,231 (GRCm39) |
missense |
probably damaging |
1.00 |
R1686:Rapgef6
|
UTSW |
11 |
54,582,458 (GRCm39) |
missense |
possibly damaging |
0.81 |
R1722:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1743:Rapgef6
|
UTSW |
11 |
54,567,110 (GRCm39) |
missense |
probably damaging |
1.00 |
R1816:Rapgef6
|
UTSW |
11 |
54,585,314 (GRCm39) |
missense |
probably benign |
|
R1852:Rapgef6
|
UTSW |
11 |
54,533,637 (GRCm39) |
missense |
probably benign |
0.01 |
R1868:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1888:Rapgef6
|
UTSW |
11 |
54,551,654 (GRCm39) |
missense |
probably damaging |
1.00 |
R1888:Rapgef6
|
UTSW |
11 |
54,551,654 (GRCm39) |
missense |
probably damaging |
1.00 |
R1942:Rapgef6
|
UTSW |
11 |
54,548,089 (GRCm39) |
missense |
possibly damaging |
0.95 |
R1943:Rapgef6
|
UTSW |
11 |
54,548,089 (GRCm39) |
missense |
possibly damaging |
0.95 |
R2031:Rapgef6
|
UTSW |
11 |
54,443,684 (GRCm39) |
missense |
probably benign |
0.30 |
R2087:Rapgef6
|
UTSW |
11 |
54,522,075 (GRCm39) |
missense |
probably damaging |
1.00 |
R2106:Rapgef6
|
UTSW |
11 |
54,559,512 (GRCm39) |
missense |
probably benign |
0.17 |
R2362:Rapgef6
|
UTSW |
11 |
54,585,098 (GRCm39) |
missense |
probably damaging |
1.00 |
R2484:Rapgef6
|
UTSW |
11 |
54,533,582 (GRCm39) |
missense |
possibly damaging |
0.48 |
R2566:Rapgef6
|
UTSW |
11 |
54,578,537 (GRCm39) |
missense |
possibly damaging |
0.66 |
R2872:Rapgef6
|
UTSW |
11 |
54,552,001 (GRCm39) |
missense |
probably damaging |
1.00 |
R2872:Rapgef6
|
UTSW |
11 |
54,552,001 (GRCm39) |
missense |
probably damaging |
1.00 |
R3744:Rapgef6
|
UTSW |
11 |
54,516,760 (GRCm39) |
missense |
probably benign |
0.40 |
R3848:Rapgef6
|
UTSW |
11 |
54,582,134 (GRCm39) |
missense |
probably damaging |
0.97 |
R4823:Rapgef6
|
UTSW |
11 |
54,585,326 (GRCm39) |
missense |
probably benign |
0.08 |
R4859:Rapgef6
|
UTSW |
11 |
54,526,989 (GRCm39) |
missense |
probably benign |
|
R4906:Rapgef6
|
UTSW |
11 |
54,443,662 (GRCm39) |
missense |
probably damaging |
1.00 |
R4911:Rapgef6
|
UTSW |
11 |
54,513,143 (GRCm39) |
missense |
probably damaging |
0.97 |
R4937:Rapgef6
|
UTSW |
11 |
54,548,143 (GRCm39) |
missense |
probably damaging |
1.00 |
R5033:Rapgef6
|
UTSW |
11 |
54,582,207 (GRCm39) |
missense |
possibly damaging |
0.92 |
R5249:Rapgef6
|
UTSW |
11 |
54,413,943 (GRCm39) |
missense |
probably benign |
0.19 |
R5304:Rapgef6
|
UTSW |
11 |
54,548,200 (GRCm39) |
missense |
probably benign |
0.01 |
R5656:Rapgef6
|
UTSW |
11 |
54,526,962 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5701:Rapgef6
|
UTSW |
11 |
54,567,220 (GRCm39) |
missense |
possibly damaging |
0.76 |
R5758:Rapgef6
|
UTSW |
11 |
54,559,470 (GRCm39) |
missense |
probably damaging |
1.00 |
R5973:Rapgef6
|
UTSW |
11 |
54,530,609 (GRCm39) |
missense |
probably damaging |
1.00 |
R6177:Rapgef6
|
UTSW |
11 |
54,510,842 (GRCm39) |
missense |
probably damaging |
1.00 |
R6268:Rapgef6
|
UTSW |
11 |
54,540,073 (GRCm39) |
missense |
probably damaging |
1.00 |
R6287:Rapgef6
|
UTSW |
11 |
54,517,164 (GRCm39) |
splice site |
probably null |
|
R6293:Rapgef6
|
UTSW |
11 |
54,525,607 (GRCm39) |
missense |
probably damaging |
1.00 |
R6471:Rapgef6
|
UTSW |
11 |
54,582,563 (GRCm39) |
missense |
probably damaging |
0.99 |
R6863:Rapgef6
|
UTSW |
11 |
54,437,206 (GRCm39) |
missense |
probably benign |
0.00 |
R6950:Rapgef6
|
UTSW |
11 |
54,567,206 (GRCm39) |
missense |
probably benign |
0.09 |
R7144:Rapgef6
|
UTSW |
11 |
54,548,191 (GRCm39) |
missense |
possibly damaging |
0.78 |
R7171:Rapgef6
|
UTSW |
11 |
54,567,189 (GRCm39) |
missense |
possibly damaging |
0.94 |
R7199:Rapgef6
|
UTSW |
11 |
54,437,252 (GRCm39) |
missense |
probably benign |
0.00 |
R7291:Rapgef6
|
UTSW |
11 |
54,582,065 (GRCm39) |
missense |
probably benign |
0.05 |
R7436:Rapgef6
|
UTSW |
11 |
54,501,747 (GRCm39) |
critical splice donor site |
probably null |
|
R7498:Rapgef6
|
UTSW |
11 |
54,510,830 (GRCm39) |
missense |
probably damaging |
1.00 |
R7506:Rapgef6
|
UTSW |
11 |
54,526,997 (GRCm39) |
missense |
probably benign |
0.00 |
R7527:Rapgef6
|
UTSW |
11 |
54,525,787 (GRCm39) |
missense |
unknown |
|
R7646:Rapgef6
|
UTSW |
11 |
54,516,780 (GRCm39) |
missense |
probably benign |
0.00 |
R7655:Rapgef6
|
UTSW |
11 |
54,585,279 (GRCm39) |
missense |
probably benign |
0.10 |
R7656:Rapgef6
|
UTSW |
11 |
54,585,279 (GRCm39) |
missense |
probably benign |
0.10 |
R7687:Rapgef6
|
UTSW |
11 |
54,551,901 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7768:Rapgef6
|
UTSW |
11 |
54,517,414 (GRCm39) |
missense |
probably damaging |
1.00 |
R7788:Rapgef6
|
UTSW |
11 |
54,585,225 (GRCm39) |
missense |
probably damaging |
1.00 |
R7890:Rapgef6
|
UTSW |
11 |
54,517,549 (GRCm39) |
missense |
probably damaging |
1.00 |
R8113:Rapgef6
|
UTSW |
11 |
54,516,784 (GRCm39) |
missense |
probably benign |
0.03 |
R8337:Rapgef6
|
UTSW |
11 |
54,522,127 (GRCm39) |
nonsense |
probably null |
|
R8393:Rapgef6
|
UTSW |
11 |
54,578,487 (GRCm39) |
missense |
probably benign |
|
R8465:Rapgef6
|
UTSW |
11 |
54,582,308 (GRCm39) |
missense |
probably benign |
0.00 |
R8492:Rapgef6
|
UTSW |
11 |
54,581,063 (GRCm39) |
missense |
probably damaging |
0.99 |
R8791:Rapgef6
|
UTSW |
11 |
54,459,295 (GRCm39) |
missense |
probably benign |
0.15 |
R8866:Rapgef6
|
UTSW |
11 |
54,443,700 (GRCm39) |
critical splice donor site |
probably null |
|
R8917:Rapgef6
|
UTSW |
11 |
54,582,392 (GRCm39) |
nonsense |
probably null |
|
R8921:Rapgef6
|
UTSW |
11 |
54,570,065 (GRCm39) |
missense |
probably benign |
0.09 |
R9031:Rapgef6
|
UTSW |
11 |
54,578,667 (GRCm39) |
missense |
probably benign |
0.00 |
R9093:Rapgef6
|
UTSW |
11 |
54,487,912 (GRCm39) |
nonsense |
probably null |
|
R9354:Rapgef6
|
UTSW |
11 |
54,510,749 (GRCm39) |
missense |
possibly damaging |
0.66 |
R9514:Rapgef6
|
UTSW |
11 |
54,443,684 (GRCm39) |
missense |
probably benign |
0.14 |
R9516:Rapgef6
|
UTSW |
11 |
54,582,169 (GRCm39) |
missense |
probably damaging |
1.00 |
R9739:Rapgef6
|
UTSW |
11 |
54,513,189 (GRCm39) |
missense |
probably benign |
0.03 |
R9789:Rapgef6
|
UTSW |
11 |
54,540,097 (GRCm39) |
missense |
probably benign |
0.03 |
|
Predicted Primers |
PCR Primer
(F):5'- TTAGCCTGAGAAAGTGACGATTG -3'
(R):5'- GACTCAGCTCTCTTTCCTACAATAAAC -3'
Sequencing Primer
(F):5'- ATTTCTGAGTTCCAGGACAGCCAG -3'
(R):5'- CAATAAACATTAAAATCCCCACATGG -3'
|
Posted On |
2014-06-23 |