Incidental Mutation 'R1852:Siglec1'
| ID |
208170 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Siglec1
|
| Ensembl Gene |
ENSMUSG00000027322 |
| Gene Name |
sialic acid binding Ig-like lectin 1, sialoadhesin |
| Synonyms |
Sn, CD169, Siglec-1 |
| MMRRC Submission |
039876-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.076)
|
| Stock # |
R1852 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
2 |
| Chromosomal Location |
130911140-130928685 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
C to A
at 130923420 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Valine to Leucine
at position 442
(V442L)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000105856
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000028794]
[ENSMUST00000110226]
[ENSMUST00000110227]
|
| AlphaFold |
no structure available at present |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000028794
AA Change: V442L
PolyPhen 2
Score 0.886 (Sensitivity: 0.82; Specificity: 0.94)
|
| SMART Domains |
Protein: ENSMUSP00000028794
Gene: ENSMUSG00000027322
AA Change: V442L
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
23 |
N/A |
INTRINSIC |
|
IG
|
32 |
142 |
2.92e-5 |
SMART |
|
Pfam:C2-set_2
|
148 |
235 |
9.4e-18 |
PFAM |
|
IGc2
|
260 |
319 |
8.78e-9 |
SMART |
|
IGc2
|
344 |
404 |
4.07e-4 |
SMART |
|
IGc2
|
431 |
505 |
3.3e-4 |
SMART |
|
IGc2
|
529 |
589 |
5.75e-4 |
SMART |
|
IGc2
|
622 |
698 |
3.54e-4 |
SMART |
|
low complexity region
|
700 |
705 |
N/A |
INTRINSIC |
|
IG
|
716 |
795 |
3.35e-5 |
SMART |
|
IG
|
804 |
896 |
6.51e-3 |
SMART |
|
IGc2
|
909 |
969 |
4.13e-5 |
SMART |
|
IG_like
|
1001 |
1076 |
6.78e-2 |
SMART |
|
low complexity region
|
1077 |
1088 |
N/A |
INTRINSIC |
|
IG
|
1094 |
1171 |
4.32e-8 |
SMART |
|
IG_like
|
1185 |
1250 |
1.94e-2 |
SMART |
|
IG
|
1268 |
1345 |
1.36e-5 |
SMART |
|
IG_like
|
1354 |
1447 |
1.45e1 |
SMART |
|
IG_like
|
1365 |
1435 |
4.51e-2 |
SMART |
|
IG
|
1454 |
1534 |
4.56e-7 |
SMART |
|
IG_like
|
1549 |
1624 |
1.21e-1 |
SMART |
|
transmembrane domain
|
1647 |
1669 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000110226
|
| SMART Domains |
Protein: ENSMUSP00000105855
Gene: ENSMUSG00000027322
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
23 |
N/A |
INTRINSIC |
|
IG
|
32 |
142 |
2.92e-5 |
SMART |
|
Pfam:C2-set_2
|
148 |
235 |
7.7e-18 |
PFAM |
|
IGc2
|
260 |
319 |
8.78e-9 |
SMART |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000110227
AA Change: V442L
PolyPhen 2
Score 0.979 (Sensitivity: 0.75; Specificity: 0.96)
|
| SMART Domains |
Protein: ENSMUSP00000105856
Gene: ENSMUSG00000027322
AA Change: V442L
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
23 |
N/A |
INTRINSIC |
|
IG
|
32 |
142 |
2.92e-5 |
SMART |
|
Pfam:C2-set_2
|
148 |
235 |
7e-17 |
PFAM |
|
IGc2
|
260 |
319 |
8.78e-9 |
SMART |
|
IGc2
|
344 |
404 |
4.07e-4 |
SMART |
|
IGc2
|
431 |
505 |
3.3e-4 |
SMART |
|
IGc2
|
529 |
589 |
5.75e-4 |
SMART |
|
IGc2
|
622 |
698 |
3.54e-4 |
SMART |
|
low complexity region
|
700 |
705 |
N/A |
INTRINSIC |
|
IG
|
716 |
795 |
3.35e-5 |
SMART |
|
IG
|
804 |
896 |
6.51e-3 |
SMART |
|
IGc2
|
909 |
969 |
4.13e-5 |
SMART |
|
IG_like
|
1001 |
1076 |
6.78e-2 |
SMART |
|
low complexity region
|
1077 |
1088 |
N/A |
INTRINSIC |
|
IG
|
1094 |
1171 |
4.32e-8 |
SMART |
|
IG_like
|
1185 |
1250 |
1.94e-2 |
SMART |
|
IG
|
1268 |
1345 |
1.36e-5 |
SMART |
|
IG_like
|
1354 |
1447 |
1.45e1 |
SMART |
|
IG_like
|
1365 |
1435 |
4.51e-2 |
SMART |
|
IG
|
1454 |
1534 |
4.56e-7 |
SMART |
|
| Coding Region Coverage |
- 1x: 97.4%
- 3x: 96.8%
- 10x: 95.0%
- 20x: 91.6%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the immunoglobulin superfamily. The encoded protein is a lectin-like adhesion molecule that binds glycoconjugate ligands on cell surfaces in a sialic acid-dependent manner. It is a type I transmembrane protein expressed only by a subpopulation of macrophages and is involved in mediating cell-cell interactions. Alternative splicing produces a transcript variant encoding an isoform that is soluble rather than membrane-bound; however, the full-length nature of this variant has not been determined. [provided by RefSeq, Jul 2008]
PHENOTYPE: Mice homozygous for a disruption in this gene display subtle changes in B- and T-cell populations and decreased IgM levels. Mice homozygous for a knock-out or knock-in allele exhibit impaired phagocytosis of sialylated C. jejuni. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 106 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 2900092C05Rik |
A |
G |
7: 12,246,629 (GRCm39) |
|
probably null |
Het |
| 4930433I11Rik |
T |
A |
7: 40,643,037 (GRCm39) |
D326E |
probably benign |
Het |
| Abca8a |
T |
C |
11: 109,960,212 (GRCm39) |
D676G |
probably damaging |
Het |
| Abcb7 |
T |
C |
X: 103,349,005 (GRCm39) |
M153V |
probably benign |
Het |
| Ablim3 |
G |
A |
18: 61,982,466 (GRCm39) |
H160Y |
probably benign |
Het |
| Acsl6 |
T |
C |
11: 54,251,902 (GRCm39) |
I683T |
probably damaging |
Het |
| Adgrg5 |
A |
T |
8: 95,664,428 (GRCm39) |
Y345F |
probably damaging |
Het |
| Alg6 |
T |
G |
4: 99,634,599 (GRCm39) |
F114V |
probably benign |
Het |
| Ank2 |
A |
C |
3: 126,791,500 (GRCm39) |
|
probably null |
Het |
| Ankrd24 |
A |
T |
10: 81,478,775 (GRCm39) |
|
probably benign |
Het |
| Ano8 |
T |
C |
8: 71,936,131 (GRCm39) |
K222E |
probably damaging |
Het |
| Arhgef5 |
T |
C |
6: 43,252,119 (GRCm39) |
S957P |
probably benign |
Het |
| Bltp2 |
A |
G |
11: 78,159,299 (GRCm39) |
D499G |
probably damaging |
Het |
| Bmpr1b |
A |
T |
3: 141,563,163 (GRCm39) |
|
probably null |
Het |
| C3 |
A |
G |
17: 57,529,823 (GRCm39) |
V2A |
probably damaging |
Het |
| Capn1 |
A |
G |
19: 6,059,133 (GRCm39) |
V276A |
possibly damaging |
Het |
| Ccdc57 |
T |
C |
11: 120,812,499 (GRCm39) |
E85G |
probably damaging |
Het |
| Chil3 |
C |
T |
3: 106,056,117 (GRCm39) |
|
probably null |
Het |
| Chl1 |
A |
T |
6: 103,676,120 (GRCm39) |
|
probably null |
Het |
| Chodl |
C |
T |
16: 78,738,146 (GRCm39) |
P38L |
probably benign |
Het |
| Clec4a2 |
G |
T |
6: 123,116,084 (GRCm39) |
E124* |
probably null |
Het |
| Cmtr1 |
T |
C |
17: 29,921,229 (GRCm39) |
V825A |
probably benign |
Het |
| Cnksr3 |
T |
C |
10: 7,070,539 (GRCm39) |
I232V |
probably benign |
Het |
| Cntn1 |
C |
T |
15: 92,203,021 (GRCm39) |
R768C |
probably damaging |
Het |
| Col15a1 |
G |
T |
4: 47,299,278 (GRCm39) |
|
probably null |
Het |
| Col6a3 |
T |
A |
1: 90,735,256 (GRCm39) |
I798F |
possibly damaging |
Het |
| Cpxcr1 |
T |
A |
X: 115,387,758 (GRCm39) |
L223* |
probably null |
Het |
| Cul1 |
A |
G |
6: 47,497,764 (GRCm39) |
N615S |
probably damaging |
Het |
| Cxcr2 |
A |
G |
1: 74,198,438 (GRCm39) |
I311V |
probably benign |
Het |
| Cyp2c67 |
C |
T |
19: 39,605,811 (GRCm39) |
G362S |
probably benign |
Het |
| D930048N14Rik |
T |
A |
11: 51,544,692 (GRCm39) |
|
probably benign |
Het |
| Ddx49 |
T |
C |
8: 70,753,633 (GRCm39) |
T79A |
probably damaging |
Het |
| Defb46 |
T |
A |
8: 19,289,991 (GRCm39) |
|
probably null |
Het |
| Dnah17 |
T |
A |
11: 118,012,742 (GRCm39) |
I145F |
probably damaging |
Het |
| Dock8 |
A |
T |
19: 25,104,492 (GRCm39) |
I725F |
probably benign |
Het |
| Dppa4 |
G |
A |
16: 48,108,247 (GRCm39) |
A11T |
probably damaging |
Het |
| Enam |
T |
A |
5: 88,652,324 (GRCm39) |
S1278T |
possibly damaging |
Het |
| Fndc3a |
A |
G |
14: 72,794,283 (GRCm39) |
V829A |
probably damaging |
Het |
| Gatb |
T |
G |
3: 85,526,184 (GRCm39) |
L354R |
probably damaging |
Het |
| Gm10787 |
A |
T |
10: 76,857,711 (GRCm39) |
|
noncoding transcript |
Het |
| Gsap |
T |
A |
5: 21,495,543 (GRCm39) |
|
probably null |
Het |
| Gtf2ird1 |
T |
C |
5: 134,411,434 (GRCm39) |
|
probably null |
Het |
| Has3 |
A |
T |
8: 107,600,711 (GRCm39) |
I58F |
probably damaging |
Het |
| Haus5 |
A |
T |
7: 30,357,926 (GRCm39) |
|
probably null |
Het |
| Hip1r |
T |
C |
5: 124,129,568 (GRCm39) |
V169A |
probably benign |
Het |
| Hnf1a |
T |
A |
5: 115,108,770 (GRCm39) |
D45V |
probably damaging |
Het |
| Il20ra |
T |
A |
10: 19,618,767 (GRCm39) |
Y72N |
probably damaging |
Het |
| Ipo11 |
A |
T |
13: 106,948,765 (GRCm39) |
V914E |
possibly damaging |
Het |
| Itpr1 |
T |
C |
6: 108,363,667 (GRCm39) |
L763P |
probably damaging |
Het |
| Katnal2 |
C |
A |
18: 77,103,719 (GRCm39) |
R104L |
probably benign |
Het |
| Kcng4 |
G |
T |
8: 120,352,947 (GRCm39) |
P321Q |
probably benign |
Het |
| Larp4b |
T |
C |
13: 9,187,339 (GRCm39) |
|
probably null |
Het |
| Lars1 |
T |
C |
18: 42,345,673 (GRCm39) |
N1001S |
probably benign |
Het |
| Lhcgr |
T |
A |
17: 89,072,604 (GRCm39) |
I148F |
probably damaging |
Het |
| Lsm10 |
T |
A |
4: 125,991,756 (GRCm39) |
S37R |
possibly damaging |
Het |
| Mfsd13a |
A |
G |
19: 46,360,619 (GRCm39) |
|
probably null |
Het |
| Mipep |
T |
A |
14: 61,080,689 (GRCm39) |
C560* |
probably null |
Het |
| Mme |
G |
A |
3: 63,235,467 (GRCm39) |
D172N |
probably benign |
Het |
| Mme |
A |
G |
3: 63,235,404 (GRCm39) |
S97G |
probably benign |
Het |
| Mtrex |
A |
T |
13: 113,009,461 (GRCm39) |
H979Q |
probably benign |
Het |
| Mx1 |
A |
T |
16: 97,249,403 (GRCm39) |
L608Q |
probably damaging |
Het |
| Myt1l |
T |
C |
12: 29,901,660 (GRCm39) |
M208T |
probably benign |
Het |
| Neb |
T |
C |
2: 52,118,554 (GRCm39) |
I3987V |
probably damaging |
Het |
| Nelfcd |
A |
G |
2: 174,265,771 (GRCm39) |
|
probably null |
Het |
| Neto1 |
T |
C |
18: 86,414,009 (GRCm39) |
M1T |
probably null |
Het |
| Nom1 |
T |
C |
5: 29,651,876 (GRCm39) |
F738S |
possibly damaging |
Het |
| Or10v1 |
C |
A |
19: 11,874,249 (GRCm39) |
P288H |
probably damaging |
Het |
| Or4f61 |
C |
A |
2: 111,922,192 (GRCm39) |
V285L |
probably benign |
Het |
| Or51h5 |
C |
T |
7: 102,577,648 (GRCm39) |
S271L |
probably damaging |
Het |
| Or5b123 |
C |
T |
19: 13,596,967 (GRCm39) |
S147F |
probably damaging |
Het |
| Or5w14 |
T |
C |
2: 87,541,317 (GRCm39) |
|
probably null |
Het |
| Or6c203 |
T |
C |
10: 129,010,197 (GRCm39) |
K231R |
probably benign |
Het |
| Or6f2 |
T |
A |
7: 139,756,474 (GRCm39) |
L147* |
probably null |
Het |
| Or9m1b |
T |
G |
2: 87,836,865 (GRCm39) |
I86L |
probably damaging |
Het |
| Pak1ip1 |
A |
G |
13: 41,164,708 (GRCm39) |
T264A |
possibly damaging |
Het |
| Palb2 |
G |
T |
7: 121,713,537 (GRCm39) |
D915E |
possibly damaging |
Het |
| Pank4 |
T |
C |
4: 155,060,816 (GRCm39) |
L491P |
probably damaging |
Het |
| Paqr7 |
T |
C |
4: 134,234,980 (GRCm39) |
V279A |
probably benign |
Het |
| Pcif1 |
G |
A |
2: 164,730,386 (GRCm39) |
R373Q |
probably damaging |
Het |
| Pdgfa |
T |
A |
5: 138,964,927 (GRCm39) |
N185I |
probably benign |
Het |
| Plcd4 |
T |
C |
1: 74,588,520 (GRCm39) |
V123A |
possibly damaging |
Het |
| Pramel26 |
T |
C |
4: 143,539,396 (GRCm39) |
I32M |
probably benign |
Het |
| Prune2 |
A |
G |
19: 17,176,503 (GRCm39) |
I154V |
probably damaging |
Het |
| Rac3 |
T |
G |
11: 120,614,320 (GRCm39) |
L148R |
possibly damaging |
Het |
| Rapgef6 |
T |
A |
11: 54,533,637 (GRCm39) |
D362E |
probably benign |
Het |
| Rbl1 |
A |
G |
2: 157,016,823 (GRCm39) |
I592T |
probably benign |
Het |
| Rbl2 |
A |
C |
8: 91,822,191 (GRCm39) |
D408A |
possibly damaging |
Het |
| Retreg2 |
A |
G |
1: 75,123,319 (GRCm39) |
K416E |
probably benign |
Het |
| Rorb |
A |
T |
19: 18,939,447 (GRCm39) |
L234H |
probably damaging |
Het |
| Rpp40 |
T |
G |
13: 36,080,897 (GRCm39) |
D279A |
probably benign |
Het |
| Sik3 |
C |
G |
9: 46,132,387 (GRCm39) |
H1276Q |
probably benign |
Het |
| Slc25a34 |
G |
A |
4: 141,349,579 (GRCm39) |
T192I |
probably benign |
Het |
| Sp140l1 |
G |
A |
1: 85,062,852 (GRCm39) |
|
probably benign |
Het |
| Sptbn5 |
T |
C |
2: 119,902,125 (GRCm39) |
I126M |
possibly damaging |
Het |
| Strada |
A |
G |
11: 106,062,047 (GRCm39) |
V94A |
possibly damaging |
Het |
| Stxbp5 |
C |
A |
10: 9,688,042 (GRCm39) |
V420F |
possibly damaging |
Het |
| Tgm1 |
T |
C |
14: 55,942,398 (GRCm39) |
Y651C |
probably damaging |
Het |
| Tmem200c |
T |
A |
17: 69,147,612 (GRCm39) |
V65E |
probably damaging |
Het |
| Tmem74 |
A |
T |
15: 43,730,559 (GRCm39) |
D161E |
probably benign |
Het |
| Trgc3 |
A |
T |
13: 19,445,261 (GRCm39) |
M70L |
probably damaging |
Het |
| Vcan |
T |
G |
13: 89,853,511 (GRCm39) |
E483A |
probably damaging |
Het |
| Vmn2r124 |
A |
G |
17: 18,283,436 (GRCm39) |
T377A |
probably benign |
Het |
| Vmn2r3 |
A |
C |
3: 64,166,815 (GRCm39) |
I772S |
probably damaging |
Het |
| Wdfy3 |
A |
G |
5: 102,063,242 (GRCm39) |
V1342A |
probably benign |
Het |
| Zfp507 |
T |
C |
7: 35,487,176 (GRCm39) |
H764R |
probably damaging |
Het |
| Znrf3 |
A |
G |
11: 5,237,455 (GRCm39) |
I218T |
possibly damaging |
Het |
|
| Other mutations in Siglec1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00482:Siglec1
|
APN |
2 |
130,921,245 (GRCm39) |
missense |
probably benign |
0.03 |
|
IGL01092:Siglec1
|
APN |
2 |
130,921,137 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01115:Siglec1
|
APN |
2 |
130,916,422 (GRCm39) |
missense |
probably benign |
0.01 |
|
IGL01324:Siglec1
|
APN |
2 |
130,927,461 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01330:Siglec1
|
APN |
2 |
130,916,925 (GRCm39) |
nonsense |
probably null |
|
|
IGL01330:Siglec1
|
APN |
2 |
130,925,456 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01558:Siglec1
|
APN |
2 |
130,920,419 (GRCm39) |
missense |
probably damaging |
0.96 |
|
IGL01632:Siglec1
|
APN |
2 |
130,925,740 (GRCm39) |
missense |
probably benign |
0.03 |
|
IGL01768:Siglec1
|
APN |
2 |
130,916,314 (GRCm39) |
missense |
probably benign |
|
|
IGL02399:Siglec1
|
APN |
2 |
130,913,098 (GRCm39) |
missense |
probably benign |
0.16 |
|
IGL02558:Siglec1
|
APN |
2 |
130,916,915 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
IGL02794:Siglec1
|
APN |
2 |
130,917,889 (GRCm39) |
missense |
possibly damaging |
0.86 |
|
IGL02839:Siglec1
|
APN |
2 |
130,926,852 (GRCm39) |
missense |
possibly damaging |
0.82 |
|
aggressor
|
UTSW |
2 |
130,925,861 (GRCm39) |
nonsense |
probably null |
|
|
boris
|
UTSW |
2 |
130,921,297 (GRCm39) |
nonsense |
probably null |
|
|
espia
|
UTSW |
2 |
130,914,664 (GRCm39) |
missense |
probably damaging |
0.98 |
|
hoodlum
|
UTSW |
2 |
130,914,667 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
microfische
|
UTSW |
2 |
130,928,015 (GRCm39) |
missense |
possibly damaging |
0.73 |
|
K3955:Siglec1
|
UTSW |
2 |
130,923,359 (GRCm39) |
missense |
probably benign |
0.00 |
|
P0038:Siglec1
|
UTSW |
2 |
130,923,359 (GRCm39) |
missense |
probably benign |
0.00 |
|
PIT4576001:Siglec1
|
UTSW |
2 |
130,920,081 (GRCm39) |
missense |
probably damaging |
1.00 |
|
PIT4677001:Siglec1
|
UTSW |
2 |
130,914,677 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0003:Siglec1
|
UTSW |
2 |
130,916,980 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0048:Siglec1
|
UTSW |
2 |
130,915,317 (GRCm39) |
missense |
possibly damaging |
0.65 |
|
R0048:Siglec1
|
UTSW |
2 |
130,915,317 (GRCm39) |
missense |
possibly damaging |
0.65 |
|
R0243:Siglec1
|
UTSW |
2 |
130,927,396 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0276:Siglec1
|
UTSW |
2 |
130,925,861 (GRCm39) |
nonsense |
probably null |
|
|
R0379:Siglec1
|
UTSW |
2 |
130,916,445 (GRCm39) |
splice site |
probably benign |
|
|
R0464:Siglec1
|
UTSW |
2 |
130,921,279 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0507:Siglec1
|
UTSW |
2 |
130,916,445 (GRCm39) |
splice site |
probably benign |
|
|
R0560:Siglec1
|
UTSW |
2 |
130,912,266 (GRCm39) |
missense |
probably benign |
0.02 |
|
R0620:Siglec1
|
UTSW |
2 |
130,916,188 (GRCm39) |
missense |
probably benign |
0.30 |
|
R0621:Siglec1
|
UTSW |
2 |
130,916,188 (GRCm39) |
missense |
probably benign |
0.30 |
|
R0853:Siglec1
|
UTSW |
2 |
130,926,942 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R1079:Siglec1
|
UTSW |
2 |
130,921,297 (GRCm39) |
nonsense |
probably null |
|
|
R1169:Siglec1
|
UTSW |
2 |
130,916,747 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R1205:Siglec1
|
UTSW |
2 |
130,922,384 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R1293:Siglec1
|
UTSW |
2 |
130,915,451 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1470:Siglec1
|
UTSW |
2 |
130,912,307 (GRCm39) |
missense |
probably benign |
0.19 |
|
R1470:Siglec1
|
UTSW |
2 |
130,912,307 (GRCm39) |
missense |
probably benign |
0.19 |
|
R1533:Siglec1
|
UTSW |
2 |
130,918,078 (GRCm39) |
missense |
probably benign |
|
|
R1717:Siglec1
|
UTSW |
2 |
130,925,932 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1717:Siglec1
|
UTSW |
2 |
130,915,876 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R1744:Siglec1
|
UTSW |
2 |
130,923,219 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1941:Siglec1
|
UTSW |
2 |
130,920,051 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R2011:Siglec1
|
UTSW |
2 |
130,925,277 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2012:Siglec1
|
UTSW |
2 |
130,925,277 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2128:Siglec1
|
UTSW |
2 |
130,922,417 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2278:Siglec1
|
UTSW |
2 |
130,913,257 (GRCm39) |
missense |
probably benign |
0.28 |
|
R2403:Siglec1
|
UTSW |
2 |
130,916,395 (GRCm39) |
missense |
possibly damaging |
0.65 |
|
R2449:Siglec1
|
UTSW |
2 |
130,920,645 (GRCm39) |
missense |
probably benign |
0.44 |
|
R2885:Siglec1
|
UTSW |
2 |
130,914,667 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
R4213:Siglec1
|
UTSW |
2 |
130,916,038 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4274:Siglec1
|
UTSW |
2 |
130,927,734 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4679:Siglec1
|
UTSW |
2 |
130,915,331 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
R4715:Siglec1
|
UTSW |
2 |
130,916,356 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4782:Siglec1
|
UTSW |
2 |
130,917,843 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4896:Siglec1
|
UTSW |
2 |
130,911,789 (GRCm39) |
missense |
probably benign |
0.21 |
|
R4993:Siglec1
|
UTSW |
2 |
130,915,281 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R5004:Siglec1
|
UTSW |
2 |
130,915,331 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
R5004:Siglec1
|
UTSW |
2 |
130,911,789 (GRCm39) |
missense |
probably benign |
0.21 |
|
R5105:Siglec1
|
UTSW |
2 |
130,922,320 (GRCm39) |
missense |
possibly damaging |
0.69 |
|
R5137:Siglec1
|
UTSW |
2 |
130,923,264 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5153:Siglec1
|
UTSW |
2 |
130,927,497 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5311:Siglec1
|
UTSW |
2 |
130,921,236 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5600:Siglec1
|
UTSW |
2 |
130,927,503 (GRCm39) |
missense |
probably benign |
0.01 |
|
R5682:Siglec1
|
UTSW |
2 |
130,925,930 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5732:Siglec1
|
UTSW |
2 |
130,916,188 (GRCm39) |
missense |
probably benign |
0.30 |
|
R5870:Siglec1
|
UTSW |
2 |
130,914,767 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5898:Siglec1
|
UTSW |
2 |
130,915,553 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5909:Siglec1
|
UTSW |
2 |
130,919,884 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6488:Siglec1
|
UTSW |
2 |
130,923,227 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R6920:Siglec1
|
UTSW |
2 |
130,919,997 (GRCm39) |
nonsense |
probably null |
|
|
R7064:Siglec1
|
UTSW |
2 |
130,925,834 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7270:Siglec1
|
UTSW |
2 |
130,923,471 (GRCm39) |
missense |
possibly damaging |
0.67 |
|
R7355:Siglec1
|
UTSW |
2 |
130,922,371 (GRCm39) |
missense |
probably benign |
0.02 |
|
R7400:Siglec1
|
UTSW |
2 |
130,928,015 (GRCm39) |
missense |
possibly damaging |
0.73 |
|
R7470:Siglec1
|
UTSW |
2 |
130,917,744 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7568:Siglec1
|
UTSW |
2 |
130,914,602 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7781:Siglec1
|
UTSW |
2 |
130,923,258 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7853:Siglec1
|
UTSW |
2 |
130,923,212 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7999:Siglec1
|
UTSW |
2 |
130,913,083 (GRCm39) |
missense |
probably benign |
0.28 |
|
R8191:Siglec1
|
UTSW |
2 |
130,927,599 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8274:Siglec1
|
UTSW |
2 |
130,925,830 (GRCm39) |
missense |
probably benign |
|
|
R8345:Siglec1
|
UTSW |
2 |
130,920,498 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R8670:Siglec1
|
UTSW |
2 |
130,923,387 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8814:Siglec1
|
UTSW |
2 |
130,914,664 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R9102:Siglec1
|
UTSW |
2 |
130,915,389 (GRCm39) |
missense |
probably benign |
0.01 |
|
R9311:Siglec1
|
UTSW |
2 |
130,916,013 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9416:Siglec1
|
UTSW |
2 |
130,925,390 (GRCm39) |
missense |
probably benign |
0.01 |
|
R9462:Siglec1
|
UTSW |
2 |
130,916,404 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9521:Siglec1
|
UTSW |
2 |
130,915,246 (GRCm39) |
critical splice donor site |
probably null |
|
|
R9683:Siglec1
|
UTSW |
2 |
130,921,236 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9799:Siglec1
|
UTSW |
2 |
130,915,941 (GRCm39) |
missense |
probably damaging |
0.99 |
|
X0024:Siglec1
|
UTSW |
2 |
130,922,411 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1176:Siglec1
|
UTSW |
2 |
130,922,444 (GRCm39) |
missense |
possibly damaging |
0.83 |
|
Z1176:Siglec1
|
UTSW |
2 |
130,920,665 (GRCm39) |
missense |
probably damaging |
0.99 |
|
| Predicted Primers |
PCR Primer
(F):5'- AAGTCTAGGCTGGACGTTGAG -3'
(R):5'- AGATCGCCATGTTCTAGGGTG -3'
Sequencing Primer
(F):5'- GAGTTGACAGCTAAGCATGTGTACTC -3'
(R):5'- CCATGTTCTAGGGTGCTGCAG -3'
|
| Posted On |
2014-06-23 |
Incidental Mutation