Mutagenetix > Incidental Mutation

Incidental Mutation 'R1866:Or4c35'

208694

Institutional Source

Beutler Lab

Gene Symbol

Or4c35

Ensembl Gene

ENSMUSG00000042894

Gene Name

olfactory receptor family 4 subfamily C member 35

Synonyms

GA_x6K02T2Q125-51409740-51410672, Olfr1260, MOR232-2

MMRRC Submission

039889-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.135) question?

Stock #

R1866 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

89808124-89809056 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 89808671 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Leucine to Serine at position 183 (L183S)

Ref Sequence

ENSEMBL: ENSMUSP00000151110 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000061830] [ENSMUST00000111512] [ENSMUST00000144710] [ENSMUST00000214630] [ENSMUST00000216678]

AlphaFold

Q8VGN9

Predicted Effect

possibly damaging
Transcript: ENSMUST00000061830
AA Change: L183S

PolyPhen 2 Score 0.798 (Sensitivity: 0.84; Specificity: 0.93)

SMART Domains

Protein: ENSMUSP00000053523
Gene: ENSMUSG00000042894
AA Change: L183S

Domain	Start	End	E-Value	Type
Pfam:7tm_4	29	303	2.7e-45	PFAM
Pfam:7tm_1	39	285	1.7e-15	PFAM

Predicted Effect

possibly damaging
Transcript: ENSMUST00000111512
AA Change: L183S

PolyPhen 2 Score 0.798 (Sensitivity: 0.84; Specificity: 0.93)

SMART Domains

Protein: ENSMUSP00000107137
Gene: ENSMUSG00000042894
AA Change: L183S

Domain	Start	End	E-Value	Type
Pfam:7tm_1	39	285	7.4e-27	PFAM
Pfam:7tm_4	137	278	2.4e-38	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000141685

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000144613

Predicted Effect

probably benign
Transcript: ENSMUST00000144710

SMART Domains

Protein: ENSMUSP00000119512
Gene: ENSMUSG00000042894

Domain	Start	End	E-Value	Type
Pfam:7tm_1	39	121	4.2e-14	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000213162

Predicted Effect

probably damaging
Transcript: ENSMUST00000214630
AA Change: L183S

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000216744

Predicted Effect

probably benign
Transcript: ENSMUST00000216678

Coding Region Coverage

1x: 97.4%
3x: 96.8%
10x: 95.3%
20x: 92.6%

Validation Efficiency

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 92 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Apba1	A	T	19: 23,870,195 (GRCm39)	E9V	probably benign	Het
Armc8	T	A	9: 99,418,333 (GRCm39)	T32S	probably benign	Het
Atr	T	A	9: 95,752,658 (GRCm39)		probably null	Het
Blm	A	G	7: 80,143,862 (GRCm39)	L859P	probably benign	Het
Cacna2d3	A	T	14: 28,691,171 (GRCm39)	F51L	probably damaging	Het
Cdcp2	A	G	4: 106,964,197 (GRCm39)	N349S	probably damaging	Het
Cfap57	G	A	4: 118,457,124 (GRCm39)	H442Y	possibly damaging	Het
Chrm3	A	G	13: 9,928,517 (GRCm39)	L173P	probably damaging	Het
Cpb1	C	G	3: 20,317,920 (GRCm39)	M201I	probably benign	Het
Dgcr8	A	T	16: 18,076,178 (GRCm39)	N2K	probably damaging	Het
Dnah3	A	T	7: 119,528,079 (GRCm39)		probably null	Het
Dnah6	T	A	6: 73,077,071 (GRCm39)	Q2398L	probably benign	Het
Dpep2	A	T	8: 106,716,080 (GRCm39)		probably null	Het
Eif2ak4	C	A	2: 118,303,142 (GRCm39)	T1504K	probably damaging	Het
Exoc6b	A	G	6: 84,828,896 (GRCm39)	V496A	probably damaging	Het
Fam174a	A	C	1: 95,241,620 (GRCm39)	S27R	probably benign	Het
Fat2	T	A	11: 55,182,840 (GRCm39)	Q1339L	probably benign	Het
Fkbpl	T	A	17: 34,864,797 (GRCm39)	D188E	possibly damaging	Het
Focad	A	G	4: 88,325,402 (GRCm39)	D89G	possibly damaging	Het
Fstl4	C	A	11: 53,077,225 (GRCm39)	Q661K	probably benign	Het
Gck	T	C	11: 5,853,253 (GRCm39)	Y289C	probably benign	Het
Gm16181	T	A	17: 35,442,913 (GRCm39)		probably benign	Het
Herc1	G	A	9: 66,358,073 (GRCm39)	G2385S	probably damaging	Het
Igfn1	T	C	1: 135,902,606 (GRCm39)		probably null	Het
Il12b	T	C	11: 44,299,353 (GRCm39)	W141R	probably damaging	Het
Itga6	T	A	2: 71,664,414 (GRCm39)	S517T	probably benign	Het
Kank1	A	G	19: 25,388,813 (GRCm39)	S801G	probably benign	Het
Klrh1	A	G	6: 129,752,343 (GRCm39)		probably null	Het
Lctl	A	G	9: 64,039,003 (GRCm39)	D205G	probably damaging	Het
Lhx3	A	C	2: 26,093,986 (GRCm39)	V79G	probably damaging	Het
Lrrc9	T	C	12: 72,543,912 (GRCm39)	I1127T	probably damaging	Het
Ltbp3	A	T	19: 5,797,877 (GRCm39)	E505D	probably benign	Het
Man1c1	G	C	4: 134,430,749 (GRCm39)	P11R	probably damaging	Het
Map6	A	G	7: 98,965,083 (GRCm39)	S291G	probably damaging	Het
Mapk7	A	G	11: 61,380,239 (GRCm39)	F671L	probably benign	Het
Mau2	A	G	8: 70,484,142 (GRCm39)	W149R	probably damaging	Het
Mb21d2	C	T	16: 28,647,267 (GRCm39)	V236I	possibly damaging	Het
Mc5r	C	G	18: 68,471,741 (GRCm39)		probably null	Het
Mical1	C	A	10: 41,361,466 (GRCm39)	P797Q	probably benign	Het
Mnx1	G	A	5: 29,679,043 (GRCm39)	R347C	unknown	Het
Mslnl	G	A	17: 25,961,908 (GRCm39)	V128M	probably damaging	Het
Nlrp2	G	T	7: 5,330,715 (GRCm39)	C560*	probably null	Het
Npat	T	A	9: 53,474,416 (GRCm39)	L736H	probably damaging	Het
Nup155	T	A	15: 8,145,010 (GRCm39)	V147E	probably damaging	Het
Nxpe2	A	G	9: 48,238,121 (GRCm39)	F45L	probably benign	Het
Obscn	T	C	11: 58,951,741 (GRCm39)	D4370G	probably benign	Het
Or2d3b	A	G	7: 106,514,273 (GRCm39)	I289M	probably damaging	Het
Or4a79	T	C	2: 89,551,550 (GRCm39)	K302E	probably benign	Het
Or4d10	A	G	19: 12,051,183 (GRCm39)	V271A	probably benign	Het
Or52n4	A	G	7: 104,294,004 (GRCm39)	S190P	probably benign	Het
Or5g23	T	A	2: 85,439,188 (GRCm39)	H22L	probably benign	Het
Or8k3	A	C	2: 86,059,072 (GRCm39)	M81R	probably damaging	Het
Pcx	T	C	19: 4,671,249 (GRCm39)	I1157T	possibly damaging	Het
Pias2	T	A	18: 77,240,412 (GRCm39)	S589R	probably benign	Het
Plcb1	T	C	2: 135,186,093 (GRCm39)	F687L	probably benign	Het
Plk5	G	T	10: 80,196,403 (GRCm39)		probably null	Het
Pnpla2	T	A	7: 141,035,329 (GRCm39)	Y44N	probably damaging	Het
Ppp1r12a	T	A	10: 108,098,292 (GRCm39)	D337E	possibly damaging	Het
Prl2c5	G	T	13: 13,365,358 (GRCm39)		probably null	Het
Prom2	T	C	2: 127,378,514 (GRCm39)	D460G	probably damaging	Het
Pros1	A	G	16: 62,748,498 (GRCm39)	H657R	possibly damaging	Het
Prune2	A	G	19: 17,100,856 (GRCm39)	E2120G	probably damaging	Het
Rap2a	T	A	14: 120,716,347 (GRCm39)	L70Q	probably damaging	Het
Rbl2	A	T	8: 91,839,157 (GRCm39)	E858D	probably benign	Het
Rbm48	T	C	5: 3,645,997 (GRCm39)	Y69C	probably damaging	Het
Rgs12	T	A	5: 35,123,018 (GRCm39)	I267N	probably damaging	Het
Rpusd2	G	T	2: 118,865,728 (GRCm39)	A142S	probably benign	Het
Rspo2	A	T	15: 42,939,332 (GRCm39)	W153R	probably damaging	Het
Sdk2	C	T	11: 113,729,472 (GRCm39)		silent	Het
Serinc5	T	A	13: 92,842,771 (GRCm39)	M407K	probably damaging	Het
Slain2	T	C	5: 73,114,665 (GRCm39)	S299P	probably damaging	Het
Slc17a4	A	G	13: 24,084,528 (GRCm39)	Y419H	possibly damaging	Het
Slc1a6	T	A	10: 78,627,183 (GRCm39)	D173E	probably damaging	Het
Slc22a19	A	T	19: 7,688,506 (GRCm39)	I18N	probably damaging	Het
Slc37a3	A	T	6: 39,336,902 (GRCm39)	F91L	probably damaging	Het
Spag5	C	A	11: 78,195,281 (GRCm39)	T196K	possibly damaging	Het
Susd2	G	T	10: 75,475,566 (GRCm39)	A326D	probably damaging	Het
Syna	G	T	5: 134,588,769 (GRCm39)	A60D	probably damaging	Het
Tchh	A	T	3: 93,355,067 (GRCm39)	E1502D	unknown	Het
Tecta	T	C	9: 42,303,320 (GRCm39)	H104R	probably damaging	Het
Tmed1	T	C	9: 21,420,387 (GRCm39)	D102G	probably damaging	Het
Trip12	T	C	1: 84,722,781 (GRCm39)	D128G	probably damaging	Het
Uroc1	A	G	6: 90,338,506 (GRCm39)	M656V	probably benign	Het
Usp47	T	A	7: 111,701,077 (GRCm39)	V1096D	possibly damaging	Het
Utp20	T	A	10: 88,598,632 (GRCm39)	K115*	probably null	Het
Vmn2r19	G	T	6: 123,308,597 (GRCm39)		probably null	Het
Vmn2r86	A	T	10: 130,282,255 (GRCm39)	V787D	probably damaging	Het
Vmn2r87	A	T	10: 130,308,441 (GRCm39)	I599N	possibly damaging	Het
Vwf	A	G	6: 125,644,492 (GRCm39)	D2449G	possibly damaging	Het
Zbtb7c	T	A	18: 76,269,977 (GRCm39)	C22S	probably benign	Het
Zc3h7a	A	G	16: 10,965,168 (GRCm39)	I655T	possibly damaging	Het
Zfp764l1	A	G	7: 126,992,503 (GRCm39)	W36R	probably damaging	Het

Other mutations in Or4c35

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01548:Or4c35	APN	2	89,808,883 (GRCm39)	missense	possibly damaging	0.69
IGL01657:Or4c35	APN	2	89,808,221 (GRCm39)	missense	probably damaging	1.00
IGL01942:Or4c35	APN	2	89,808,322 (GRCm39)	missense	probably benign	0.03
IGL02139:Or4c35	APN	2	89,808,773 (GRCm39)	missense	possibly damaging	0.80
IGL02926:Or4c35	APN	2	89,808,506 (GRCm39)	missense	probably damaging	1.00
IGL03110:Or4c35	APN	2	89,808,493 (GRCm39)	missense	probably damaging	1.00
IGL03368:Or4c35	APN	2	89,808,133 (GRCm39)	missense	probably benign
R0046:Or4c35	UTSW	2	89,808,851 (GRCm39)	missense	probably damaging	1.00
R0046:Or4c35	UTSW	2	89,808,851 (GRCm39)	missense	probably damaging	1.00
R0087:Or4c35	UTSW	2	89,808,475 (GRCm39)	missense	probably damaging	1.00
R0599:Or4c35	UTSW	2	89,808,545 (GRCm39)	missense	probably benign	0.01
R1208:Or4c35	UTSW	2	89,808,836 (GRCm39)	missense	probably damaging	0.99
R1208:Or4c35	UTSW	2	89,808,836 (GRCm39)	missense	probably damaging	0.99
R1424:Or4c35	UTSW	2	89,808,415 (GRCm39)	nonsense	probably null
R1503:Or4c35	UTSW	2	89,808,872 (GRCm39)	missense	probably damaging	0.99
R1708:Or4c35	UTSW	2	89,808,382 (GRCm39)	missense	probably benign	0.00
R1863:Or4c35	UTSW	2	89,808,754 (GRCm39)	missense	probably benign	0.02
R2072:Or4c35	UTSW	2	89,808,557 (GRCm39)	missense	probably benign	0.04
R2219:Or4c35	UTSW	2	89,808,256 (GRCm39)	missense	possibly damaging	0.62
R4606:Or4c35	UTSW	2	89,808,350 (GRCm39)	missense	possibly damaging	0.79
R4674:Or4c35	UTSW	2	89,808,250 (GRCm39)	missense	possibly damaging	0.52
R4825:Or4c35	UTSW	2	89,808,497 (GRCm39)	missense	probably damaging	1.00
R5822:Or4c35	UTSW	2	89,808,787 (GRCm39)	missense	probably damaging	1.00
R6487:Or4c35	UTSW	2	89,808,182 (GRCm39)	missense	probably benign	0.31
R6706:Or4c35	UTSW	2	89,808,929 (GRCm39)	missense	probably damaging	0.96
R7961:Or4c35	UTSW	2	89,808,131 (GRCm39)	missense	probably benign
R8812:Or4c35	UTSW	2	89,808,715 (GRCm39)	missense	possibly damaging	0.94
R9504:Or4c35	UTSW	2	89,808,497 (GRCm39)	missense	probably damaging	1.00
R9618:Or4c35	UTSW	2	89,808,343 (GRCm39)	missense	probably benign	0.00
X0050:Or4c35	UTSW	2	89,808,360 (GRCm39)	missense	possibly damaging	0.94

Predicted Primers

PCR Primer
(F):5'- GAGATCATCCTGCTCACAGC -3'
(R):5'- GGACCACTGTAATATGGGAGGC -3'

Sequencing Primer
(F):5'- ACCGCTATGTGGCCATCTGTAAG -3'
(R):5'- CACAGGTGGAGAGAGCCTTC -3'

Posted On

2014-06-30