Incidental Mutation 'R1908:Slco1a4'
ID 210046
Institutional Source Beutler Lab
Gene Symbol Slco1a4
Ensembl Gene ENSMUSG00000030237
Gene Name solute carrier organic anion transporter family, member 1a4
Synonyms Oatp2, Oatp1a4, Slc21a5
MMRRC Submission 039927-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.091) question?
Stock # R1908 (G1)
Quality Score 225
Status Not validated
Chromosome 6
Chromosomal Location 141751166-141801925 bp(-) (GRCm39)
Type of Mutation critical splice donor site (2 bp from exon)
DNA Base Change (assembly) A to G at 141761173 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000130746 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000032364] [ENSMUST00000032364] [ENSMUST00000165990] [ENSMUST00000165990]
AlphaFold Q9EP96
Predicted Effect probably null
Transcript: ENSMUST00000032364
SMART Domains Protein: ENSMUSP00000032364
Gene: ENSMUSG00000030237

DomainStartEndE-ValueType
Pfam:OATP 19 598 3.2e-196 PFAM
Pfam:MFS_1 22 421 9.2e-27 PFAM
Pfam:Kazal_2 445 486 5e-10 PFAM
transmembrane domain 600 622 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000032364
SMART Domains Protein: ENSMUSP00000032364
Gene: ENSMUSG00000030237

DomainStartEndE-ValueType
Pfam:OATP 19 598 3.2e-196 PFAM
Pfam:MFS_1 22 421 9.2e-27 PFAM
Pfam:Kazal_2 445 486 5e-10 PFAM
transmembrane domain 600 622 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000165990
SMART Domains Protein: ENSMUSP00000130746
Gene: ENSMUSG00000030237

DomainStartEndE-ValueType
Pfam:OATP 21 597 3.2e-164 PFAM
Pfam:MFS_1 22 421 7.2e-27 PFAM
Pfam:Kazal_2 445 486 6.8e-11 PFAM
transmembrane domain 600 622 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000165990
SMART Domains Protein: ENSMUSP00000130746
Gene: ENSMUSG00000030237

DomainStartEndE-ValueType
Pfam:OATP 21 597 3.2e-164 PFAM
Pfam:MFS_1 22 421 7.2e-27 PFAM
Pfam:Kazal_2 445 486 6.8e-11 PFAM
transmembrane domain 600 622 N/A INTRINSIC
Coding Region Coverage
  • 1x: 97.3%
  • 3x: 96.8%
  • 10x: 95.4%
  • 20x: 93.0%
Validation Efficiency
MGI Phenotype PHENOTYPE: Mice homozygous for a knock-out allele exhibit impaired organic anion transporter activity and urinary metabolomic profiles. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 83 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca8b C A 11: 109,847,924 (GRCm39) L852F possibly damaging Het
Abcc6 T C 7: 45,669,558 (GRCm39) probably null Het
Alg11 T G 8: 22,555,584 (GRCm39) C240G probably damaging Het
Aox1 A G 1: 58,141,783 (GRCm39) I1190V probably damaging Het
Apc2 T G 10: 80,150,678 (GRCm39) S1911A probably benign Het
Arfgef3 T C 10: 18,528,511 (GRCm39) D292G possibly damaging Het
Arhgef4 C A 1: 34,763,340 (GRCm39) S865R probably benign Het
Ass1 T A 2: 31,383,160 (GRCm39) Y190* probably null Het
B4galnt3 A T 6: 120,187,051 (GRCm39) probably null Het
Btnl10 C A 11: 58,811,367 (GRCm39) P230Q possibly damaging Het
C3 A G 17: 57,516,489 (GRCm39) Y1348H probably damaging Het
Ccdc198 G T 14: 49,464,032 (GRCm39) D292E probably damaging Het
Cebpz A T 17: 79,242,336 (GRCm39) Y439* probably null Het
Cic C A 7: 24,986,265 (GRCm39) T1229K probably damaging Het
Clip4 T C 17: 72,144,744 (GRCm39) S524P probably damaging Het
Col6a3 A C 1: 90,739,421 (GRCm39) I269R probably damaging Het
Dbh C T 2: 27,071,506 (GRCm39) T533I possibly damaging Het
Dcaf17 A T 2: 70,890,713 (GRCm39) R83* probably null Het
Dennd2b G A 7: 109,124,533 (GRCm39) Q686* probably null Het
Dnah1 A G 14: 30,984,515 (GRCm39) L3923P probably damaging Het
Dnah7a A T 1: 53,670,721 (GRCm39) D510E probably benign Het
Dock6 A G 9: 21,752,925 (GRCm39) F296S probably damaging Het
Eif4enif1 T C 11: 3,177,455 (GRCm39) S341P probably damaging Het
Epb41l1 G T 2: 156,352,737 (GRCm39) G461V possibly damaging Het
Epg5 T A 18: 78,002,247 (GRCm39) D555E probably benign Het
Fes T C 7: 80,036,609 (GRCm39) R113G probably damaging Het
Garre1 T A 7: 33,957,461 (GRCm39) I59L probably benign Het
Gm10684 A G 9: 45,021,511 (GRCm39) probably benign Het
Gm12185 T C 11: 48,806,231 (GRCm39) E320G probably benign Het
Gm14412 G T 2: 177,007,269 (GRCm39) H209N probably damaging Het
Gm14412 A C 2: 177,007,630 (GRCm39) S88R probably benign Het
Grhl1 T A 12: 24,658,555 (GRCm39) L400Q probably damaging Het
Havcr1 T A 11: 46,664,511 (GRCm39) Y216* probably null Het
Hephl1 A C 9: 14,985,420 (GRCm39) Y745* probably null Het
Hmcn2 T G 2: 31,301,922 (GRCm39) probably null Het
Hs3st6 A G 17: 24,977,110 (GRCm39) K197E possibly damaging Het
Ifi214 C T 1: 173,357,077 (GRCm39) V9I probably benign Het
Jakmip2 T C 18: 43,700,209 (GRCm39) T450A probably benign Het
Lrp4 T A 2: 91,328,753 (GRCm39) V1551D possibly damaging Het
Macf1 A T 4: 123,351,634 (GRCm39) H1634Q possibly damaging Het
Mcpt8 T A 14: 56,321,291 (GRCm39) I58F probably benign Het
Mga T A 2: 119,757,075 (GRCm39) H1018Q possibly damaging Het
Myo10 T A 15: 25,801,308 (GRCm39) V1499E probably damaging Het
Myom2 G T 8: 15,131,023 (GRCm39) D320Y probably damaging Het
Or11g7 T A 14: 50,691,295 (GRCm39) M262K probably damaging Het
Or13a27 T C 7: 139,925,378 (GRCm39) I175V probably benign Het
Or2r11 C T 6: 42,437,360 (GRCm39) V198M probably benign Het
Or2t26 A C 11: 49,039,101 (GRCm39) N6H possibly damaging Het
Or4c115 G A 2: 88,927,888 (GRCm39) P128S probably damaging Het
Or5d47 A T 2: 87,804,403 (GRCm39) V202D possibly damaging Het
Pabpc4 G T 4: 123,182,861 (GRCm39) R166L possibly damaging Het
Pcdhb8 A G 18: 37,489,015 (GRCm39) E231G possibly damaging Het
Pomgnt2 A T 9: 121,811,257 (GRCm39) I508N possibly damaging Het
Ppp2r5e C G 12: 75,516,341 (GRCm39) A239P probably damaging Het
Prdm15 G T 16: 97,638,885 (GRCm39) D58E probably benign Het
Rgl2 A G 17: 34,151,122 (GRCm39) T117A probably benign Het
Rp1 A G 1: 4,418,943 (GRCm39) I723T probably damaging Het
Serpina3g A G 12: 104,207,536 (GRCm39) E233G probably damaging Het
Skint6 T A 4: 112,749,187 (GRCm39) S798C probably benign Het
Slc35f1 T C 10: 52,898,000 (GRCm39) L137P possibly damaging Het
Slc6a20a T C 9: 123,485,373 (GRCm39) N246S probably damaging Het
Slc7a2 T C 8: 41,369,534 (GRCm39) L663S probably benign Het
Slit2 A G 5: 48,439,330 (GRCm39) T41A probably damaging Het
Smc2 T C 4: 52,450,863 (GRCm39) I227T probably damaging Het
Smg1 A G 7: 117,753,422 (GRCm39) probably benign Het
Ssu2 A T 6: 112,361,388 (GRCm39) L23M probably benign Het
Syne2 A G 12: 76,141,053 (GRCm39) probably null Het
Tekt1 T C 11: 72,242,761 (GRCm39) T249A probably benign Het
Tfr2 T C 5: 137,569,954 (GRCm39) V120A probably benign Het
Thsd7b C T 1: 129,605,846 (GRCm39) P529L probably damaging Het
Tll1 C T 8: 64,478,141 (GRCm39) D871N probably damaging Het
Tlr11 A C 14: 50,598,664 (GRCm39) I217L probably benign Het
Tmem87b T A 2: 128,673,479 (GRCm39) V241D probably damaging Het
Tshz2 T A 2: 169,727,465 (GRCm39) I218N possibly damaging Het
Vmn1r18 A T 6: 57,367,026 (GRCm39) I176N possibly damaging Het
Vmn2r68 T A 7: 84,883,260 (GRCm39) H164L probably benign Het
Vmn2r74 T C 7: 85,601,650 (GRCm39) T663A probably benign Het
Vmn2r8 T C 5: 108,945,436 (GRCm39) T724A probably benign Het
Wdr11 T C 7: 129,206,954 (GRCm39) V289A possibly damaging Het
Zfp62 T A 11: 49,107,047 (GRCm39) D379E probably damaging Het
Zfp78 C T 7: 6,381,897 (GRCm39) P316S probably damaging Het
Zfyve27 T G 19: 42,159,987 (GRCm39) M1R probably null Het
Zkscan8 G A 13: 21,709,325 (GRCm39) P191L probably damaging Het
Other mutations in Slco1a4
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00976:Slco1a4 APN 6 141,752,908 (GRCm39) critical splice acceptor site probably null
IGL01573:Slco1a4 APN 6 141,758,577 (GRCm39) splice site probably benign
IGL01735:Slco1a4 APN 6 141,763,477 (GRCm39) missense probably benign 0.00
IGL03115:Slco1a4 APN 6 141,763,585 (GRCm39) missense probably damaging 1.00
IGL03115:Slco1a4 APN 6 141,765,329 (GRCm39) missense probably benign 0.05
R0062:Slco1a4 UTSW 6 141,765,205 (GRCm39) nonsense probably null
R0062:Slco1a4 UTSW 6 141,765,205 (GRCm39) nonsense probably null
R0305:Slco1a4 UTSW 6 141,763,479 (GRCm39) missense possibly damaging 0.47
R0511:Slco1a4 UTSW 6 141,776,586 (GRCm39) splice site probably benign
R0660:Slco1a4 UTSW 6 141,758,467 (GRCm39) missense probably benign 0.05
R0664:Slco1a4 UTSW 6 141,758,467 (GRCm39) missense probably benign 0.05
R1589:Slco1a4 UTSW 6 141,791,173 (GRCm39) missense probably benign
R1606:Slco1a4 UTSW 6 141,785,337 (GRCm39) missense probably damaging 1.00
R1665:Slco1a4 UTSW 6 141,785,303 (GRCm39) missense possibly damaging 0.79
R1742:Slco1a4 UTSW 6 141,770,771 (GRCm39) missense probably benign 0.07
R1763:Slco1a4 UTSW 6 141,758,457 (GRCm39) missense probably benign 0.26
R1893:Slco1a4 UTSW 6 141,780,342 (GRCm39) splice site probably null
R1944:Slco1a4 UTSW 6 141,785,276 (GRCm39) missense probably benign 0.00
R2144:Slco1a4 UTSW 6 141,755,104 (GRCm39) missense probably damaging 1.00
R2276:Slco1a4 UTSW 6 141,761,308 (GRCm39) missense possibly damaging 0.49
R2340:Slco1a4 UTSW 6 141,787,103 (GRCm39) missense probably benign 0.00
R3017:Slco1a4 UTSW 6 141,758,396 (GRCm39) splice site probably null
R3769:Slco1a4 UTSW 6 141,785,357 (GRCm39) missense probably damaging 1.00
R4577:Slco1a4 UTSW 6 141,765,266 (GRCm39) missense probably damaging 0.97
R4650:Slco1a4 UTSW 6 141,758,424 (GRCm39) missense possibly damaging 0.94
R4801:Slco1a4 UTSW 6 141,791,223 (GRCm39) start gained probably benign
R4802:Slco1a4 UTSW 6 141,791,223 (GRCm39) start gained probably benign
R4896:Slco1a4 UTSW 6 141,761,231 (GRCm39) missense possibly damaging 0.91
R5126:Slco1a4 UTSW 6 141,761,308 (GRCm39) missense possibly damaging 0.94
R5183:Slco1a4 UTSW 6 141,785,357 (GRCm39) missense probably damaging 1.00
R5399:Slco1a4 UTSW 6 141,776,433 (GRCm39) missense probably damaging 0.98
R5645:Slco1a4 UTSW 6 141,780,385 (GRCm39) missense possibly damaging 0.95
R5650:Slco1a4 UTSW 6 141,755,120 (GRCm39) missense possibly damaging 0.69
R5832:Slco1a4 UTSW 6 141,765,270 (GRCm39) missense probably benign 0.00
R6180:Slco1a4 UTSW 6 141,763,546 (GRCm39) missense possibly damaging 0.95
R6415:Slco1a4 UTSW 6 141,780,415 (GRCm39) nonsense probably null
R6992:Slco1a4 UTSW 6 141,765,330 (GRCm39) missense probably benign 0.05
R7024:Slco1a4 UTSW 6 141,780,434 (GRCm39) missense probably benign 0.00
R7696:Slco1a4 UTSW 6 141,756,237 (GRCm39) nonsense probably null
R7751:Slco1a4 UTSW 6 141,780,413 (GRCm39) missense possibly damaging 0.47
R8743:Slco1a4 UTSW 6 141,765,255 (GRCm39) missense possibly damaging 0.93
R9173:Slco1a4 UTSW 6 141,761,299 (GRCm39) missense probably benign 0.03
Predicted Primers PCR Primer
(F):5'- GTCATGGTTTACATAACATCTAGGAA -3'
(R):5'- TTTCAGAGTTCAGCACCCTC -3'

Sequencing Primer
(F):5'- CTGTGATAACTCCAGCTGTGTCAAG -3'
(R):5'- AGAGTTCAGCACCCTCTATATGTGG -3'
Posted On 2014-06-30