Incidental Mutation 'R1940:Hk3'
ID 213954
Institutional Source Beutler Lab
Gene Symbol Hk3
Ensembl Gene ENSMUSG00000025877
Gene Name hexokinase 3
Synonyms
MMRRC Submission 039958-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.072) question?
Stock # R1940 (G1)
Quality Score 212
Status Validated
Chromosome 13
Chromosomal Location 55153798-55169198 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) C to T at 55159204 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Valine to Isoleucine at position 451 (V451I)
Ref Sequence ENSEMBL: ENSMUSP00000123233 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000052949] [ENSMUST00000123097] [ENSMUST00000126234] [ENSMUST00000132309] [ENSMUST00000148221] [ENSMUST00000153665]
AlphaFold Q3TRM8
Predicted Effect probably damaging
Transcript: ENSMUST00000052949
AA Change: V451I

PolyPhen 2 Score 0.984 (Sensitivity: 0.74; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000051215
Gene: ENSMUSG00000025877
AA Change: V451I

DomainStartEndE-ValueType
Pfam:Hexokinase_1 29 232 3.7e-76 PFAM
Pfam:Hexokinase_2 234 473 1.9e-87 PFAM
Pfam:Hexokinase_1 475 674 2.2e-77 PFAM
Pfam:Hexokinase_2 676 915 2.3e-103 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000123097
SMART Domains Protein: ENSMUSP00000116717
Gene: ENSMUSG00000025877

DomainStartEndE-ValueType
Pfam:Hexokinase_1 29 232 3.3e-77 PFAM
Pfam:Hexokinase_2 234 457 6e-74 PFAM
Pfam:Hexokinase_1 430 629 3e-78 PFAM
Pfam:Hexokinase_2 631 870 1e-104 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000126234
AA Change: V451I

PolyPhen 2 Score 0.984 (Sensitivity: 0.74; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000123233
Gene: ENSMUSG00000025877
AA Change: V451I

DomainStartEndE-ValueType
Pfam:Hexokinase_1 31 230 2.4e-63 PFAM
Pfam:Hexokinase_2 236 470 2.9e-62 PFAM
Pfam:Hexokinase_1 480 673 2e-69 PFAM
Pfam:Hexokinase_2 678 912 1.5e-81 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000132309
SMART Domains Protein: ENSMUSP00000117254
Gene: ENSMUSG00000025877

DomainStartEndE-ValueType
Pfam:Hexokinase_1 29 164 4.1e-39 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000135983
Predicted Effect probably benign
Transcript: ENSMUST00000148221
Predicted Effect probably benign
Transcript: ENSMUST00000153665
AA Change: V396I

PolyPhen 2 Score 0.218 (Sensitivity: 0.91; Specificity: 0.88)
SMART Domains Protein: ENSMUSP00000115227
Gene: ENSMUSG00000025877
AA Change: V396I

DomainStartEndE-ValueType
Pfam:Hexokinase_1 1 177 8.5e-70 PFAM
Pfam:Hexokinase_2 179 418 9.4e-88 PFAM
Pfam:Hexokinase_1 420 619 1.2e-77 PFAM
Pfam:Hexokinase_2 621 860 1.1e-103 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000149644
Meta Mutation Damage Score 0.3333 question?
Coding Region Coverage
  • 1x: 97.5%
  • 3x: 97.0%
  • 10x: 95.8%
  • 20x: 93.7%
Validation Efficiency 98% (108/110)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Hexokinases phosphorylate glucose to produce glucose-6-phosphate, the first step in most glucose metabolism pathways. This gene encodes hexokinase 3. Similar to hexokinases 1 and 2, this allosteric enzyme is inhibited by its product glucose-6-phosphate. [provided by RefSeq, Apr 2009]
Allele List at MGI
Other mutations in this stock
Total: 107 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca16 T C 7: 120,032,832 (GRCm39) probably benign Het
Ace2 A T X: 162,939,524 (GRCm39) M123L possibly damaging Het
Acvr1c A T 2: 58,173,517 (GRCm39) N248K probably damaging Het
Adam24 A T 8: 41,134,400 (GRCm39) R623* probably null Het
Agbl2 T A 2: 90,641,626 (GRCm39) L752Q probably damaging Het
Ankrd26 A T 6: 118,488,654 (GRCm39) F1335Y probably damaging Het
Ankrd34a A G 3: 96,505,992 (GRCm39) S399G probably benign Het
Aoc1l3 A T 6: 48,967,007 (GRCm39) K652* probably null Het
Ap3d1 G A 10: 80,545,607 (GRCm39) P1041S probably benign Het
Arid3b A T 9: 57,703,431 (GRCm39) M466K possibly damaging Het
Arsj T C 3: 126,231,995 (GRCm39) I247T probably damaging Het
AU016765 G A 17: 64,826,873 (GRCm39) noncoding transcript Het
Azin2 C T 4: 128,844,577 (GRCm39) probably null Het
Bcat2 T C 7: 45,237,792 (GRCm39) Y313H possibly damaging Het
Cables2 A G 2: 179,901,873 (GRCm39) V465A probably damaging Het
Ccdc60 G A 5: 116,264,224 (GRCm39) H517Y probably damaging Het
Cd55b A T 1: 130,345,843 (GRCm39) probably null Het
Cdc40 G A 10: 40,759,067 (GRCm39) probably benign Het
Cdh20 G A 1: 109,976,754 (GRCm39) V140I probably benign Het
Cdhr18 A T 14: 13,828,582 (GRCm38) M726K probably null Het
Cfi T C 3: 129,652,477 (GRCm39) probably benign Het
Chit1 G A 1: 134,073,156 (GRCm39) probably null Het
Chn1 A G 2: 73,455,245 (GRCm39) C39R probably damaging Het
Ciao1 A G 2: 127,088,380 (GRCm39) S148P possibly damaging Het
Clmn G A 12: 104,756,361 (GRCm39) T163I probably damaging Het
Cngb1 C A 8: 96,026,320 (GRCm39) G154W probably damaging Het
Col19a1 A T 1: 24,303,831 (GRCm39) C1117* probably null Het
Cplane1 T A 15: 8,263,336 (GRCm39) S2496R probably damaging Het
Cyp2d10 T A 15: 82,289,495 (GRCm39) I206F probably benign Het
Ddrgk1 G T 2: 130,505,480 (GRCm39) probably benign Het
Ddx18 A T 1: 121,482,953 (GRCm39) V611D probably damaging Het
Dnah8 A T 17: 30,950,181 (GRCm39) H2000L probably damaging Het
Duox1 T C 2: 122,156,465 (GRCm39) V464A probably benign Het
Dync2h1 A G 9: 7,139,159 (GRCm39) probably null Het
Eif4enif1 A G 11: 3,193,279 (GRCm39) H857R probably damaging Het
Elmo2 A G 2: 165,133,970 (GRCm39) probably benign Het
Fam171b CCAGCAGCAGCAGCAGCAGCAGC CCAGCAGCAGCAGCAGCAGC 2: 83,643,218 (GRCm39) probably benign Het
Glrx A G 13: 75,988,256 (GRCm39) I57V probably benign Het
Golm1 A T 13: 59,790,051 (GRCm39) probably benign Het
Grm3 G A 5: 9,561,682 (GRCm39) R723W probably damaging Het
Gsta3 G A 1: 21,327,601 (GRCm39) R45Q probably benign Het
Gtf3c3 A C 1: 54,468,117 (GRCm39) probably benign Het
Hoxa10 C A 6: 52,211,350 (GRCm39) G189C possibly damaging Het
Hs3st3b1 T C 11: 63,780,569 (GRCm39) D186G probably benign Het
Hscb G T 5: 110,983,926 (GRCm39) H63N probably benign Het
Itpr3 A G 17: 27,330,191 (GRCm39) E1603G probably damaging Het
Ivl T A 3: 92,480,056 (GRCm39) H3L probably benign Het
Klhl26 C A 8: 70,904,911 (GRCm39) R252L probably damaging Het
Krt31 T A 11: 99,939,069 (GRCm39) T251S probably benign Het
Lama5 T C 2: 179,832,714 (GRCm39) N1646S probably benign Het
Lhx3 T C 2: 26,093,974 (GRCm39) D83G probably benign Het
Lss C A 10: 76,381,296 (GRCm39) N427K possibly damaging Het
Mettl24 G A 10: 40,613,722 (GRCm39) A154T probably benign Het
Mgat4a A T 1: 37,575,118 (GRCm39) probably null Het
Moxd2 C T 6: 40,860,466 (GRCm39) R326Q probably damaging Het
Mpdz G A 4: 81,279,680 (GRCm39) A669V probably benign Het
Msra G A 14: 64,522,505 (GRCm39) probably benign Het
Muc13 A T 16: 33,628,281 (GRCm39) T344S probably benign Het
Myo3b T C 2: 70,088,419 (GRCm39) I866T probably benign Het
Nbea T C 3: 55,860,521 (GRCm39) S1852G possibly damaging Het
Ncf2 A G 1: 152,709,815 (GRCm39) probably benign Het
Nfyc C A 4: 120,630,861 (GRCm39) probably benign Het
Nop2 T C 6: 125,111,597 (GRCm39) V110A probably benign Het
Nrg2 C A 18: 36,329,897 (GRCm39) probably benign Het
Nrl A G 14: 55,759,892 (GRCm39) Y12H probably damaging Het
Nrxn3 T C 12: 89,227,151 (GRCm39) V635A probably damaging Het
Or4d11 A C 19: 12,013,275 (GRCm39) V277G probably benign Het
Or6b2b T A 1: 92,419,457 (GRCm39) T7S probably benign Het
Or8k41 T A 2: 86,313,703 (GRCm39) K128* probably null Het
Or9g8 T A 2: 85,607,515 (GRCm39) S196T probably benign Het
Papolg A T 11: 23,817,279 (GRCm39) N639K probably benign Het
Paqr4 T C 17: 23,956,638 (GRCm39) I242V probably damaging Het
Pramel6 A T 2: 87,339,076 (GRCm39) K92M probably damaging Het
Prg4 T C 1: 150,331,774 (GRCm39) T300A possibly damaging Het
Ptprb A T 10: 116,155,515 (GRCm39) probably benign Het
Rab28 A T 5: 41,783,133 (GRCm39) S216T probably benign Het
Rrp1b A T 17: 32,275,819 (GRCm39) R455S possibly damaging Het
Sash1 A T 10: 8,605,696 (GRCm39) M898K probably benign Het
Scn8a C T 15: 100,868,085 (GRCm39) T310I probably benign Het
Secisbp2l C A 2: 125,582,259 (GRCm39) D1066Y probably damaging Het
Sipa1l2 A G 8: 126,206,887 (GRCm39) probably benign Het
Slc12a1 A G 2: 125,036,113 (GRCm39) T662A probably benign Het
Slc12a4 T C 8: 106,672,669 (GRCm39) I749V probably benign Het
Slc22a27 A G 19: 7,887,092 (GRCm39) S266P probably damaging Het
Slc25a14 G A X: 47,740,840 (GRCm39) V210I probably benign Het
Slit1 T A 19: 41,619,215 (GRCm39) N762I probably damaging Het
Spata31d1b C A 13: 59,865,835 (GRCm39) D994E possibly damaging Het
Sphk1 A G 11: 116,426,676 (GRCm39) I204V probably benign Het
Srsf6 C T 2: 162,776,403 (GRCm39) probably benign Het
Tet2 T C 3: 133,194,399 (GRCm39) T12A possibly damaging Het
Tgfbi A T 13: 56,762,127 (GRCm39) Q70L possibly damaging Het
Tlr9 T C 9: 106,101,846 (GRCm39) L379P probably damaging Het
Tnrc6c A G 11: 117,646,849 (GRCm39) D1450G possibly damaging Het
Tra2b A G 16: 22,073,795 (GRCm39) probably benign Het
Trit1 T C 4: 122,948,033 (GRCm39) I451T probably benign Het
Trnau1ap A G 4: 132,049,114 (GRCm39) Y30H probably damaging Het
Ttc34 G A 4: 154,950,139 (GRCm39) A1031T possibly damaging Het
Ubiad1 A G 4: 148,528,468 (GRCm39) L147P probably damaging Het
Ush2a A G 1: 188,683,758 (GRCm39) D4979G probably null Het
Usp50 C T 2: 126,619,943 (GRCm39) R123Q probably benign Het
Vmn2r117 A T 17: 23,696,454 (GRCm39) Y318N probably damaging Het
Whamm C T 7: 81,228,047 (GRCm39) T304I probably null Het
Wipf2 C T 11: 98,783,236 (GRCm39) R221* probably null Het
Ythdf3 A G 3: 16,259,256 (GRCm39) N468D possibly damaging Het
Zbtb17 T C 4: 141,192,859 (GRCm39) I486T possibly damaging Het
Zfp3 T C 11: 70,662,202 (GRCm39) S54P probably benign Het
Zscan10 A T 17: 23,828,826 (GRCm39) H379L probably damaging Het
Other mutations in Hk3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00941:Hk3 APN 13 55,162,239 (GRCm39) critical splice donor site probably null
IGL01314:Hk3 APN 13 55,154,876 (GRCm39) splice site probably benign
IGL02043:Hk3 APN 13 55,162,908 (GRCm39) missense probably damaging 1.00
IGL02197:Hk3 APN 13 55,162,281 (GRCm39) missense probably damaging 1.00
IGL02619:Hk3 APN 13 55,162,107 (GRCm39) missense probably damaging 1.00
R0454:Hk3 UTSW 13 55,156,518 (GRCm39) missense probably damaging 1.00
R0518:Hk3 UTSW 13 55,162,239 (GRCm39) critical splice donor site probably null
R0521:Hk3 UTSW 13 55,162,239 (GRCm39) critical splice donor site probably null
R0709:Hk3 UTSW 13 55,162,543 (GRCm39) missense probably damaging 1.00
R1386:Hk3 UTSW 13 55,154,843 (GRCm39) splice site probably null
R1567:Hk3 UTSW 13 55,154,418 (GRCm39) missense probably damaging 1.00
R1647:Hk3 UTSW 13 55,162,274 (GRCm39) missense probably damaging 1.00
R1648:Hk3 UTSW 13 55,162,274 (GRCm39) missense probably damaging 1.00
R1663:Hk3 UTSW 13 55,154,388 (GRCm39) missense probably benign 0.00
R1936:Hk3 UTSW 13 55,159,204 (GRCm39) missense probably damaging 0.98
R1966:Hk3 UTSW 13 55,162,268 (GRCm39) missense probably damaging 1.00
R2345:Hk3 UTSW 13 55,156,806 (GRCm39) missense probably damaging 1.00
R4838:Hk3 UTSW 13 55,154,231 (GRCm39) missense probably damaging 1.00
R4852:Hk3 UTSW 13 55,160,409 (GRCm39) missense probably damaging 0.99
R4883:Hk3 UTSW 13 55,158,735 (GRCm39) missense probably benign 0.04
R4888:Hk3 UTSW 13 55,154,405 (GRCm39) missense probably damaging 1.00
R5100:Hk3 UTSW 13 55,156,843 (GRCm39) missense probably damaging 1.00
R5253:Hk3 UTSW 13 55,158,824 (GRCm39) missense probably damaging 1.00
R5328:Hk3 UTSW 13 55,161,306 (GRCm39) missense probably benign 0.00
R5441:Hk3 UTSW 13 55,162,869 (GRCm39) missense probably damaging 1.00
R5493:Hk3 UTSW 13 55,158,984 (GRCm39) missense probably damaging 1.00
R5557:Hk3 UTSW 13 55,159,888 (GRCm39) nonsense probably null
R5575:Hk3 UTSW 13 55,162,583 (GRCm39) missense probably damaging 0.99
R5578:Hk3 UTSW 13 55,159,994 (GRCm39) missense probably damaging 1.00
R5686:Hk3 UTSW 13 55,154,626 (GRCm39) missense probably damaging 1.00
R5872:Hk3 UTSW 13 55,158,617 (GRCm39) missense probably damaging 1.00
R6038:Hk3 UTSW 13 55,154,373 (GRCm39) missense probably benign 0.13
R6038:Hk3 UTSW 13 55,154,373 (GRCm39) missense probably benign 0.13
R6314:Hk3 UTSW 13 55,161,393 (GRCm39) missense probably benign 0.02
R6315:Hk3 UTSW 13 55,158,970 (GRCm39) missense probably benign 0.03
R6797:Hk3 UTSW 13 55,158,644 (GRCm39) splice site probably null
R6827:Hk3 UTSW 13 55,159,165 (GRCm39) missense probably damaging 0.98
R6860:Hk3 UTSW 13 55,162,278 (GRCm39) missense probably damaging 0.98
R7082:Hk3 UTSW 13 55,154,710 (GRCm39) missense probably benign 0.40
R7227:Hk3 UTSW 13 55,160,053 (GRCm39) missense probably benign 0.00
R7564:Hk3 UTSW 13 55,159,209 (GRCm39) missense probably damaging 1.00
R8274:Hk3 UTSW 13 55,159,230 (GRCm39) missense possibly damaging 0.95
R9704:Hk3 UTSW 13 55,160,253 (GRCm39) critical splice donor site probably null
X0003:Hk3 UTSW 13 55,154,949 (GRCm39) missense probably benign 0.01
Z1177:Hk3 UTSW 13 55,158,523 (GRCm39) missense probably damaging 0.96
Z1177:Hk3 UTSW 13 55,158,521 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- GATCATGGCTTCCCGCATTTG -3'
(R):5'- GTACCAATGAACAGGTTTAGGAC -3'

Sequencing Primer
(F):5'- GCATTTGTGCCTGCACCAC -3'
(R):5'- CCTTATCTGGCATCAATGGGAG -3'
Posted On 2014-07-14