Incidental Mutation 'R2023:Adam3'
| ID |
220131 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Adam3
|
| Ensembl Gene |
ENSMUSG00000031553 |
| Gene Name |
ADAM metallopeptidase domain 3 |
| Synonyms |
Taz83, tMDC, Taz83, Cyrn1, ADAM3 |
| MMRRC Submission |
040032-MU
|
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
R2023 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
|
| Chromosome |
8 |
| Chromosomal Location |
25167241-25215868 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
G to A
at 25179479 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Arginine to Cysteine
at position 613
(R613C)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000132651
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000033958]
[ENSMUST00000167431]
[ENSMUST00000170318]
[ENSMUST00000171438]
|
| AlphaFold |
F8VQ03 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000033958
AA Change: R613C
PolyPhen 2
Score 0.934 (Sensitivity: 0.80; Specificity: 0.94)
|
| SMART Domains |
Protein: ENSMUSP00000033958
Gene: ENSMUSG00000031553
AA Change: R613C
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
16 |
N/A |
INTRINSIC |
|
Pfam:Pep_M12B_propep
|
26 |
144 |
3.8e-30 |
PFAM |
|
Pfam:Reprolysin_5
|
185 |
361 |
6.8e-9 |
PFAM |
|
Pfam:Reprolysin
|
187 |
384 |
1.6e-64 |
PFAM |
|
Pfam:Reprolysin_3
|
211 |
333 |
1.2e-8 |
PFAM |
|
DISIN
|
404 |
482 |
5.58e-32 |
SMART |
|
ACR
|
483 |
614 |
4.1e-50 |
SMART |
|
EGF
|
622 |
653 |
1.66e1 |
SMART |
|
transmembrane domain
|
689 |
709 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000167431
|
| SMART Domains |
Protein: ENSMUSP00000127479
Gene: ENSMUSG00000031553
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
56 |
67 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000170318
|
| SMART Domains |
Protein: ENSMUSP00000132620
Gene: ENSMUSG00000031553
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
16 |
N/A |
INTRINSIC |
|
Pfam:Pep_M12B_propep
|
26 |
118 |
1.3e-19 |
PFAM |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000171438
AA Change: R613C
PolyPhen 2
Score 0.934 (Sensitivity: 0.80; Specificity: 0.94)
|
| SMART Domains |
Protein: ENSMUSP00000132651
Gene: ENSMUSG00000031553
AA Change: R613C
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
16 |
N/A |
INTRINSIC |
|
Pfam:Pep_M12B_propep
|
23 |
144 |
2.4e-22 |
PFAM |
|
Pfam:Reprolysin_5
|
185 |
361 |
7.8e-9 |
PFAM |
|
Pfam:Reprolysin
|
187 |
384 |
4.1e-64 |
PFAM |
|
Pfam:Reprolysin_3
|
211 |
321 |
1e-8 |
PFAM |
|
DISIN
|
404 |
482 |
5.58e-32 |
SMART |
|
ACR
|
483 |
614 |
4.1e-50 |
SMART |
|
EGF
|
622 |
653 |
1.66e1 |
SMART |
|
transmembrane domain
|
689 |
709 |
N/A |
INTRINSIC |
|
| Meta Mutation Damage Score |
0.1795 |
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.4%
- 10x: 96.5%
- 20x: 92.4%
|
| Validation Efficiency |
97% (60/62) |
| MGI Phenotype |
PHENOTYPE: Mice homozygous for targeted mutations that inactivate the gene are male infertile, due to the inability of the sperm to bind to the zona pellucida. If the zona pellucida is removed sperm-egg membrane fusion happens as expected. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 60 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 9930111J21Rik1 |
A |
G |
11: 48,839,247 (GRCm39) |
S447P |
possibly damaging |
Het |
| 9930111J21Rik2 |
A |
G |
11: 48,911,144 (GRCm39) |
F430L |
probably benign |
Het |
| Acap2 |
A |
G |
16: 30,938,233 (GRCm39) |
V297A |
probably damaging |
Het |
| Akt1 |
C |
T |
12: 112,626,071 (GRCm39) |
R67Q |
probably benign |
Het |
| Ambp |
T |
C |
4: 63,069,702 (GRCm39) |
Y108C |
probably damaging |
Het |
| Apob |
A |
G |
12: 8,061,090 (GRCm39) |
I3158V |
probably benign |
Het |
| Bank1 |
T |
C |
3: 136,031,679 (GRCm39) |
T8A |
probably benign |
Het |
| Casp8ap2 |
T |
C |
4: 32,644,560 (GRCm39) |
V1211A |
probably benign |
Het |
| Ccdc88a |
G |
T |
11: 29,413,546 (GRCm39) |
E695* |
probably null |
Het |
| Cep68 |
A |
C |
11: 20,189,888 (GRCm39) |
S375A |
probably benign |
Het |
| Cfap44 |
A |
G |
16: 44,236,375 (GRCm39) |
I417V |
probably benign |
Het |
| Chrna2 |
T |
A |
14: 66,379,677 (GRCm39) |
H5Q |
probably benign |
Het |
| Cog7 |
A |
T |
7: 121,536,193 (GRCm39) |
I549K |
probably damaging |
Het |
| Col28a1 |
C |
A |
6: 8,083,783 (GRCm39) |
S558I |
possibly damaging |
Het |
| Cyp4f14 |
A |
G |
17: 33,125,505 (GRCm39) |
I385T |
probably damaging |
Het |
| Dynlt4 |
A |
G |
4: 116,985,504 (GRCm39) |
E109G |
possibly damaging |
Het |
| Erap1 |
T |
A |
13: 74,814,627 (GRCm39) |
V451E |
probably benign |
Het |
| Frem1 |
G |
T |
4: 82,831,795 (GRCm39) |
T1988K |
probably benign |
Het |
| Gm10277 |
TC |
T |
11: 77,676,828 (GRCm39) |
|
probably null |
Het |
| Gm5616 |
A |
G |
9: 48,361,928 (GRCm39) |
|
noncoding transcript |
Het |
| Gm5709 |
T |
C |
3: 59,543,142 (GRCm39) |
|
noncoding transcript |
Het |
| Hjurp |
GT |
GTT |
1: 88,194,246 (GRCm39) |
|
probably null |
Het |
| Hsd11b1 |
T |
C |
1: 192,922,686 (GRCm39) |
T124A |
probably benign |
Het |
| Itpr3 |
T |
A |
17: 27,321,785 (GRCm39) |
M1054K |
possibly damaging |
Het |
| Kars1 |
T |
C |
8: 112,728,484 (GRCm39) |
N200S |
probably benign |
Het |
| Kdm2a |
C |
A |
19: 4,372,492 (GRCm39) |
R951L |
probably damaging |
Het |
| Ldhd |
T |
A |
8: 112,356,578 (GRCm39) |
H61L |
probably damaging |
Het |
| Macf1 |
G |
T |
4: 123,366,523 (GRCm39) |
A2746E |
probably damaging |
Het |
| Micall2 |
A |
G |
5: 139,703,266 (GRCm39) |
V190A |
possibly damaging |
Het |
| Mis18bp1 |
A |
T |
12: 65,195,883 (GRCm39) |
V627E |
probably damaging |
Het |
| Muc4 |
A |
T |
16: 32,574,054 (GRCm39) |
T711S |
probably benign |
Het |
| Notch4 |
T |
C |
17: 34,806,502 (GRCm39) |
L1813P |
probably damaging |
Het |
| Nox3 |
A |
G |
17: 3,744,296 (GRCm39) |
|
probably benign |
Het |
| Or4b1d |
G |
T |
2: 89,969,200 (GRCm39) |
C94* |
probably null |
Het |
| Or5p63 |
A |
G |
7: 107,811,049 (GRCm39) |
L229P |
probably damaging |
Het |
| Or6c1b |
T |
A |
10: 129,273,451 (GRCm39) |
Y257N |
probably damaging |
Het |
| Osbpl2 |
C |
A |
2: 179,791,969 (GRCm39) |
|
probably null |
Het |
| Pamr1 |
T |
A |
2: 102,464,880 (GRCm39) |
M343K |
probably benign |
Het |
| Pcdh15 |
T |
G |
10: 74,467,025 (GRCm39) |
S1684A |
possibly damaging |
Het |
| Pgr |
T |
A |
9: 8,958,399 (GRCm39) |
V802D |
probably damaging |
Het |
| Pgs1 |
A |
G |
11: 117,893,228 (GRCm39) |
E55G |
probably benign |
Het |
| Pkd2 |
T |
A |
5: 104,614,744 (GRCm39) |
|
probably null |
Het |
| Ppp3r2 |
T |
C |
4: 49,681,723 (GRCm39) |
I76V |
probably benign |
Het |
| Ptprd |
C |
T |
4: 75,875,341 (GRCm39) |
E1240K |
probably damaging |
Het |
| Recql5 |
G |
A |
11: 115,784,466 (GRCm39) |
T878I |
probably benign |
Het |
| Rnf17 |
A |
G |
14: 56,669,036 (GRCm39) |
D233G |
possibly damaging |
Het |
| Sectm1a |
A |
G |
11: 120,960,408 (GRCm39) |
|
probably benign |
Het |
| Smo |
A |
G |
6: 29,754,715 (GRCm39) |
N262D |
possibly damaging |
Het |
| Srcin1 |
A |
G |
11: 97,416,872 (GRCm39) |
S931P |
probably benign |
Het |
| Tcof1 |
C |
T |
18: 60,966,605 (GRCm39) |
G329R |
probably damaging |
Het |
| Thsd7a |
G |
A |
6: 12,327,535 (GRCm39) |
H1446Y |
probably benign |
Het |
| Tlr11 |
A |
G |
14: 50,600,026 (GRCm39) |
T671A |
probably damaging |
Het |
| Tmem171 |
C |
A |
13: 98,828,733 (GRCm39) |
W139L |
probably damaging |
Het |
| Vmn2r101 |
C |
T |
17: 19,810,368 (GRCm39) |
R385* |
probably null |
Het |
| Vps13c |
A |
T |
9: 67,843,567 (GRCm39) |
|
probably benign |
Het |
| Wdr87-ps |
G |
T |
7: 29,230,959 (GRCm39) |
|
noncoding transcript |
Het |
| Zfp287 |
A |
C |
11: 62,605,808 (GRCm39) |
Y366* |
probably null |
Het |
| Zfp456 |
A |
T |
13: 67,514,616 (GRCm39) |
C363* |
probably null |
Het |
| Zfp523 |
A |
G |
17: 28,419,978 (GRCm39) |
|
probably benign |
Het |
| Zfp667 |
A |
C |
7: 6,308,416 (GRCm39) |
K361N |
possibly damaging |
Het |
|
| Other mutations in Adam3 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00429:Adam3
|
APN |
8 |
25,184,294 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01792:Adam3
|
APN |
8 |
25,187,219 (GRCm39) |
missense |
probably benign |
0.27 |
|
IGL01894:Adam3
|
APN |
8 |
25,177,954 (GRCm39) |
missense |
probably benign |
0.33 |
|
IGL01941:Adam3
|
APN |
8 |
25,171,462 (GRCm39) |
utr 3 prime |
probably benign |
|
|
IGL02355:Adam3
|
APN |
8 |
25,187,207 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02362:Adam3
|
APN |
8 |
25,187,207 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02511:Adam3
|
APN |
8 |
25,185,192 (GRCm39) |
missense |
probably damaging |
0.98 |
|
IGL03070:Adam3
|
APN |
8 |
25,193,800 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03106:Adam3
|
APN |
8 |
25,205,135 (GRCm39) |
splice site |
probably benign |
|
|
IGL03238:Adam3
|
APN |
8 |
25,177,981 (GRCm39) |
splice site |
probably null |
|
|
I2288:Adam3
|
UTSW |
8 |
25,174,677 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0511:Adam3
|
UTSW |
8 |
25,185,331 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1103:Adam3
|
UTSW |
8 |
25,204,287 (GRCm39) |
splice site |
probably benign |
|
|
R1104:Adam3
|
UTSW |
8 |
25,171,545 (GRCm39) |
missense |
probably benign |
0.10 |
|
R1430:Adam3
|
UTSW |
8 |
25,204,287 (GRCm39) |
splice site |
probably benign |
|
|
R1599:Adam3
|
UTSW |
8 |
25,215,377 (GRCm39) |
missense |
possibly damaging |
0.50 |
|
R1663:Adam3
|
UTSW |
8 |
25,177,949 (GRCm39) |
missense |
probably benign |
0.03 |
|
R2278:Adam3
|
UTSW |
8 |
25,201,400 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R3033:Adam3
|
UTSW |
8 |
25,184,227 (GRCm39) |
missense |
probably benign |
0.00 |
|
R3440:Adam3
|
UTSW |
8 |
25,170,759 (GRCm39) |
utr 3 prime |
probably benign |
|
|
R3441:Adam3
|
UTSW |
8 |
25,170,759 (GRCm39) |
utr 3 prime |
probably benign |
|
|
R3688:Adam3
|
UTSW |
8 |
25,193,864 (GRCm39) |
missense |
probably benign |
0.02 |
|
R4478:Adam3
|
UTSW |
8 |
25,185,171 (GRCm39) |
missense |
probably benign |
0.04 |
|
R4654:Adam3
|
UTSW |
8 |
25,193,819 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4811:Adam3
|
UTSW |
8 |
25,201,740 (GRCm39) |
missense |
probably benign |
0.10 |
|
R4910:Adam3
|
UTSW |
8 |
25,184,321 (GRCm39) |
missense |
probably benign |
0.03 |
|
R4921:Adam3
|
UTSW |
8 |
25,174,630 (GRCm39) |
missense |
probably benign |
0.01 |
|
R4941:Adam3
|
UTSW |
8 |
25,167,332 (GRCm39) |
unclassified |
probably benign |
|
|
R5239:Adam3
|
UTSW |
8 |
25,184,207 (GRCm39) |
missense |
possibly damaging |
0.62 |
|
R5771:Adam3
|
UTSW |
8 |
25,197,427 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5897:Adam3
|
UTSW |
8 |
25,187,244 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5916:Adam3
|
UTSW |
8 |
25,174,555 (GRCm39) |
critical splice donor site |
probably null |
|
|
R5979:Adam3
|
UTSW |
8 |
25,167,383 (GRCm39) |
missense |
probably benign |
0.03 |
|
R6168:Adam3
|
UTSW |
8 |
25,171,630 (GRCm39) |
splice site |
probably null |
|
|
R6189:Adam3
|
UTSW |
8 |
25,201,352 (GRCm39) |
missense |
probably benign |
0.01 |
|
R6801:Adam3
|
UTSW |
8 |
25,174,680 (GRCm39) |
missense |
possibly damaging |
0.61 |
|
R6997:Adam3
|
UTSW |
8 |
25,171,539 (GRCm39) |
missense |
probably benign |
0.10 |
|
R7065:Adam3
|
UTSW |
8 |
25,201,691 (GRCm39) |
critical splice donor site |
probably null |
|
|
R7074:Adam3
|
UTSW |
8 |
25,184,363 (GRCm39) |
missense |
probably benign |
0.01 |
|
R7151:Adam3
|
UTSW |
8 |
25,185,271 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7208:Adam3
|
UTSW |
8 |
25,201,417 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R7341:Adam3
|
UTSW |
8 |
25,177,996 (GRCm39) |
missense |
possibly damaging |
0.60 |
|
R7528:Adam3
|
UTSW |
8 |
25,167,279 (GRCm39) |
missense |
unknown |
|
|
R7797:Adam3
|
UTSW |
8 |
25,184,660 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7891:Adam3
|
UTSW |
8 |
25,197,513 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
R8064:Adam3
|
UTSW |
8 |
25,171,566 (GRCm39) |
missense |
probably benign |
0.10 |
|
R8157:Adam3
|
UTSW |
8 |
25,197,453 (GRCm39) |
missense |
probably benign |
0.27 |
|
R8229:Adam3
|
UTSW |
8 |
25,201,754 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R9007:Adam3
|
UTSW |
8 |
25,205,127 (GRCm39) |
missense |
probably benign |
0.02 |
|
R9018:Adam3
|
UTSW |
8 |
25,184,292 (GRCm39) |
nonsense |
probably null |
|
|
R9098:Adam3
|
UTSW |
8 |
25,179,484 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9110:Adam3
|
UTSW |
8 |
25,193,821 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9125:Adam3
|
UTSW |
8 |
25,213,517 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9211:Adam3
|
UTSW |
8 |
25,177,910 (GRCm39) |
missense |
probably benign |
0.08 |
|
R9267:Adam3
|
UTSW |
8 |
25,171,605 (GRCm39) |
missense |
probably benign |
|
|
R9331:Adam3
|
UTSW |
8 |
25,177,951 (GRCm39) |
missense |
probably benign |
0.01 |
|
R9432:Adam3
|
UTSW |
8 |
25,193,928 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9716:Adam3
|
UTSW |
8 |
25,204,274 (GRCm39) |
missense |
possibly damaging |
0.65 |
|
X0063:Adam3
|
UTSW |
8 |
25,201,722 (GRCm39) |
missense |
probably damaging |
0.96 |
|
Z1088:Adam3
|
UTSW |
8 |
25,171,447 (GRCm39) |
utr 3 prime |
probably benign |
|
|
| Predicted Primers |
PCR Primer
(F):5'- TGACAGTGCCCACAAATCATG -3'
(R):5'- GAATGGCAGTCAACCCATTC -3'
Sequencing Primer
(F):5'- AGTAGCAGATTCTATGTTCCTCAG -3'
(R):5'- GTCAACCCATTCGACATATGCTG -3'
|
| Posted On |
2014-08-25 |
Incidental Mutation