Mutagenetix > Incidental Mutation

Incidental Mutation 'R2021:Styxl2'

223923

Institutional Source

Beutler Lab

Gene Symbol

Styxl2

Ensembl Gene

ENSMUSG00000026564

Gene Name

serine/threonine/tyrosine interacting like 2

Synonyms

C130085G02Rik, Dusp27

MMRRC Submission

040030-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R2021 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

165925717-165955467 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 165928392 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tryptophan to Arginine at position 407 (W407R)

Ref Sequence

ENSEMBL: ENSMUSP00000141564 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000085992] [ENSMUST00000192369]

AlphaFold

Q148W8

Predicted Effect

probably benign
Transcript: ENSMUST00000085992
AA Change: W407R

PolyPhen 2 Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)

SMART Domains

Protein: ENSMUSP00000083155
Gene: ENSMUSG00000026564
AA Change: W407R

Domain	Start	End	E-Value	Type
low complexity region	6	20	N/A	INTRINSIC
DSPc	133	277	2.45e-30	SMART
low complexity region	339	348	N/A	INTRINSIC
low complexity region	404	425	N/A	INTRINSIC
low complexity region	429	439	N/A	INTRINSIC
low complexity region	618	635	N/A	INTRINSIC
low complexity region	655	666	N/A	INTRINSIC
low complexity region	773	788	N/A	INTRINSIC
coiled coil region	813	839	N/A	INTRINSIC
low complexity region	851	860	N/A	INTRINSIC
low complexity region	936	950	N/A	INTRINSIC
low complexity region	1001	1019	N/A	INTRINSIC
low complexity region	1026	1040	N/A	INTRINSIC
low complexity region	1074	1091	N/A	INTRINSIC
low complexity region	1108	1120	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000192369
AA Change: W407R

PolyPhen 2 Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)

SMART Domains

Protein: ENSMUSP00000141564
Gene: ENSMUSG00000026564
AA Change: W407R

Domain	Start	End	E-Value	Type
low complexity region	6	20	N/A	INTRINSIC
DSPc	133	277	2.45e-30	SMART
low complexity region	339	348	N/A	INTRINSIC
low complexity region	404	425	N/A	INTRINSIC
low complexity region	429	439	N/A	INTRINSIC
low complexity region	618	635	N/A	INTRINSIC
low complexity region	655	666	N/A	INTRINSIC
low complexity region	773	788	N/A	INTRINSIC
coiled coil region	813	839	N/A	INTRINSIC
low complexity region	851	860	N/A	INTRINSIC
low complexity region	936	950	N/A	INTRINSIC
low complexity region	1001	1019	N/A	INTRINSIC
low complexity region	1026	1040	N/A	INTRINSIC
low complexity region	1074	1091	N/A	INTRINSIC
low complexity region	1108	1120	N/A	INTRINSIC

Coding Region Coverage

1x: 99.2%
3x: 98.6%
10x: 97.0%
20x: 94.2%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 64 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Ablim1	A	T	19: 57,035,450 (GRCm39)	S316T	probably damaging	Het
Alox8	C	T	11: 69,077,114 (GRCm39)	V460I	probably damaging	Het
Aoc1l2	T	C	6: 48,908,385 (GRCm39)	S462P	probably damaging	Het
Arvcf	G	A	16: 18,218,482 (GRCm39)	A491T	probably damaging	Het
Asnsd1	A	G	1: 53,386,386 (GRCm39)	S414P	possibly damaging	Het
Btbd7	A	G	12: 102,756,968 (GRCm39)	L706P	probably damaging	Het
Camk2d	T	A	3: 126,574,105 (GRCm39)	W171R	probably damaging	Het
Casc3	T	A	11: 98,712,332 (GRCm39)	S124T	probably benign	Het
Casp8ap2	T	C	4: 32,644,560 (GRCm39)	V1211A	probably benign	Het
Ccdc182	T	C	11: 88,184,962 (GRCm39)	V14A	possibly damaging	Het
Ccdc80	A	T	16: 44,943,275 (GRCm39)	Q795L	probably damaging	Het
Ccdc88a	T	G	11: 29,453,480 (GRCm39)	S1614R	probably damaging	Het
Cemip2	G	A	19: 21,822,114 (GRCm39)	A1170T	possibly damaging	Het
Clcn6	A	G	4: 148,095,109 (GRCm39)		probably null	Het
Cubn	A	G	2: 13,313,360 (GRCm39)	V3070A	probably benign	Het
Dst	G	A	1: 34,205,372 (GRCm39)	V1025I	possibly damaging	Het
Dynlt4	A	G	4: 116,985,504 (GRCm39)	E109G	possibly damaging	Het
Elk3	T	A	10: 93,101,539 (GRCm39)	I71F	probably damaging	Het
Flt3	A	T	5: 147,306,300 (GRCm39)	I276N	probably damaging	Het
Frem1	G	T	4: 82,831,795 (GRCm39)	T1988K	probably benign	Het
Golph3l	T	A	3: 95,524,668 (GRCm39)	D306E	probably benign	Het
Grk2	T	A	19: 4,340,698 (GRCm39)	I254F	probably damaging	Het
Hgf	C	T	5: 16,781,919 (GRCm39)	T214I	probably benign	Het
Hoxc5	C	A	15: 102,922,814 (GRCm39)		probably null	Het
Hsd11b1	T	C	1: 192,922,686 (GRCm39)	T124A	probably benign	Het
Ipp	A	G	4: 116,372,565 (GRCm39)	Y198C	probably benign	Het
Ism1	T	A	2: 139,582,047 (GRCm39)		probably null	Het
Klhl42	A	G	6: 146,993,394 (GRCm39)	Y122C	possibly damaging	Het
Klk1b21	A	T	7: 43,755,418 (GRCm39)	K206*	probably null	Het
Lcn11	A	G	2: 25,668,097 (GRCm39)	K85R	probably benign	Het
Macf1	G	T	4: 123,366,523 (GRCm39)	A2746E	probably damaging	Het
Matn4	A	G	2: 164,242,573 (GRCm39)	V175A	probably damaging	Het
Myh2	A	T	11: 67,082,545 (GRCm39)	N1372Y	probably damaging	Het
Ncl	A	G	1: 86,284,677 (GRCm39)		probably null	Het
Nudt2	A	G	4: 41,480,255 (GRCm39)	D46G	probably damaging	Het
Obscn	C	T	11: 58,958,000 (GRCm39)	D3567N	probably benign	Het
Or1j17	G	C	2: 36,578,487 (GRCm39)	V158L	probably benign	Het
Or2z9	G	T	8: 72,853,930 (GRCm39)	V109F	possibly damaging	Het
Or4a72	A	T	2: 89,405,305 (GRCm39)	M255K	possibly damaging	Het
Pamr1	T	A	2: 102,464,880 (GRCm39)	M343K	probably benign	Het
Pcdh15	T	G	10: 74,467,025 (GRCm39)	S1684A	possibly damaging	Het
Ppm1h	T	A	10: 122,714,433 (GRCm39)	L324*	probably null	Het
Ppp3r2	T	C	4: 49,681,723 (GRCm39)	I76V	probably benign	Het
Prkdc	G	A	16: 15,494,873 (GRCm39)	V748I	probably benign	Het
Prss47	A	G	13: 65,199,591 (GRCm39)	V96A	probably benign	Het
Rsbn1	C	T	3: 103,821,789 (GRCm39)	T8I	probably benign	Het
Rsf1	GGCG	GGCGACGGCGGCG	7: 97,229,113 (GRCm39)		probably benign	Het
Serpinb3d	A	G	1: 107,006,182 (GRCm39)	V302A	probably benign	Het
Sfrp4	A	T	13: 19,816,496 (GRCm39)	I177F	probably benign	Het
Sh3bp2	A	G	5: 34,701,569 (GRCm39)		probably benign	Het
Slc7a12	A	G	3: 14,562,393 (GRCm39)	T257A	probably damaging	Het
Spata31e5	A	T	1: 28,817,234 (GRCm39)	V266D	probably damaging	Het
Specc1l	T	C	10: 75,103,425 (GRCm39)		probably null	Het
Stard9	A	G	2: 120,534,716 (GRCm39)	T3658A	probably benign	Het
Tmem30c	T	C	16: 57,101,725 (GRCm39)	T68A	probably damaging	Het
Tnr	A	G	1: 159,679,592 (GRCm39)	I189V	probably benign	Het
Trrap	A	G	5: 144,790,298 (GRCm39)	N3586S	possibly damaging	Het
Usp14	T	C	18: 10,024,632 (GRCm39)	T22A	probably damaging	Het
Vmn1r68	A	G	7: 10,261,918 (GRCm39)	L60P	probably damaging	Het
Vmn2r108	G	A	17: 20,691,252 (GRCm39)	H424Y	probably benign	Het
Wdr81	C	A	11: 75,336,788 (GRCm39)	E1534*	probably null	Het
Zc3h13	A	G	14: 75,567,635 (GRCm39)	E976G	probably damaging	Het
Zfp128	T	C	7: 12,623,956 (GRCm39)	L108P	possibly damaging	Het
Zfp644	T	C	5: 106,783,548 (GRCm39)	I1000V	possibly damaging	Het

Other mutations in Styxl2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00706:Styxl2	APN	1	165,928,121 (GRCm39)	missense	probably benign	0.00
IGL00973:Styxl2	APN	1	165,927,027 (GRCm39)	missense	probably benign
IGL01331:Styxl2	APN	1	165,935,749 (GRCm39)	missense	probably damaging	1.00
IGL01466:Styxl2	APN	1	165,928,073 (GRCm39)	missense	probably damaging	1.00
IGL01572:Styxl2	APN	1	165,927,941 (GRCm39)	missense	probably benign	0.18
IGL01906:Styxl2	APN	1	165,927,092 (GRCm39)	missense	probably damaging	1.00
IGL01974:Styxl2	APN	1	165,928,105 (GRCm39)	nonsense	probably null
IGL02112:Styxl2	APN	1	165,927,240 (GRCm39)	nonsense	probably null
IGL02805:Styxl2	APN	1	165,926,630 (GRCm39)	missense	probably damaging	1.00
IGL03343:Styxl2	APN	1	165,927,017 (GRCm39)	missense	probably benign	0.00
R0116:Styxl2	UTSW	1	165,927,270 (GRCm39)	missense	probably benign	0.19
R0367:Styxl2	UTSW	1	165,928,332 (GRCm39)	missense	probably benign	0.05
R0499:Styxl2	UTSW	1	165,926,670 (GRCm39)	missense	probably benign	0.00
R0542:Styxl2	UTSW	1	165,928,853 (GRCm39)	missense	possibly damaging	0.90
R1312:Styxl2	UTSW	1	165,926,860 (GRCm39)	missense	possibly damaging	0.46
R1572:Styxl2	UTSW	1	165,927,024 (GRCm39)	missense	possibly damaging	0.68
R1598:Styxl2	UTSW	1	165,937,828 (GRCm39)	missense	probably benign	0.10
R1858:Styxl2	UTSW	1	165,928,415 (GRCm39)	missense	possibly damaging	0.87
R2970:Styxl2	UTSW	1	165,926,798 (GRCm39)	missense	probably benign	0.04
R3727:Styxl2	UTSW	1	165,927,075 (GRCm39)	missense	probably damaging	1.00
R4041:Styxl2	UTSW	1	165,927,680 (GRCm39)	missense	probably benign	0.01
R4245:Styxl2	UTSW	1	165,928,685 (GRCm39)	missense	probably damaging	1.00
R4955:Styxl2	UTSW	1	165,935,661 (GRCm39)	missense	probably damaging	1.00
R4967:Styxl2	UTSW	1	165,954,675 (GRCm39)	missense	probably damaging	1.00
R5040:Styxl2	UTSW	1	165,927,914 (GRCm39)	missense	probably benign	0.17
R5342:Styxl2	UTSW	1	165,937,819 (GRCm39)	missense	probably benign	0.01
R5467:Styxl2	UTSW	1	165,939,599 (GRCm39)	critical splice donor site	probably null
R5742:Styxl2	UTSW	1	165,927,023 (GRCm39)	missense	probably benign	0.00
R6222:Styxl2	UTSW	1	165,926,214 (GRCm39)	missense	probably benign	0.26
R6239:Styxl2	UTSW	1	165,926,388 (GRCm39)	missense	probably damaging	1.00
R6531:Styxl2	UTSW	1	165,937,615 (GRCm39)	splice site	probably null
R6586:Styxl2	UTSW	1	165,928,454 (GRCm39)	missense	possibly damaging	0.79
R6958:Styxl2	UTSW	1	165,935,565 (GRCm39)	missense	probably damaging	1.00
R7006:Styxl2	UTSW	1	165,926,663 (GRCm39)	missense	probably benign
R7111:Styxl2	UTSW	1	165,954,723 (GRCm39)	missense	possibly damaging	0.66
R7310:Styxl2	UTSW	1	165,926,300 (GRCm39)	missense	possibly damaging	0.46
R7312:Styxl2	UTSW	1	165,954,676 (GRCm39)	missense	probably damaging	0.99
R7378:Styxl2	UTSW	1	165,939,632 (GRCm39)	nonsense	probably null
R7398:Styxl2	UTSW	1	165,928,044 (GRCm39)	missense	probably damaging	1.00
R7442:Styxl2	UTSW	1	165,928,584 (GRCm39)	missense	probably benign	0.01
R7569:Styxl2	UTSW	1	165,935,604 (GRCm39)	missense	probably damaging	1.00
R7920:Styxl2	UTSW	1	165,927,465 (GRCm39)	missense	possibly damaging	0.72
R7954:Styxl2	UTSW	1	165,926,849 (GRCm39)	missense	probably benign	0.05
R7972:Styxl2	UTSW	1	165,926,708 (GRCm39)	missense	probably damaging	1.00
R8186:Styxl2	UTSW	1	165,927,648 (GRCm39)	missense	probably damaging	1.00
R8354:Styxl2	UTSW	1	165,935,702 (GRCm39)	missense	probably damaging	1.00
R8454:Styxl2	UTSW	1	165,935,702 (GRCm39)	missense	probably damaging	1.00
R8535:Styxl2	UTSW	1	165,928,730 (GRCm39)	missense	probably benign	0.01
R9419:Styxl2	UTSW	1	165,927,755 (GRCm39)	missense	probably damaging	1.00
R9493:Styxl2	UTSW	1	165,926,410 (GRCm39)	missense	probably damaging	1.00
R9694:Styxl2	UTSW	1	165,928,654 (GRCm39)	missense	probably damaging	1.00
Z1088:Styxl2	UTSW	1	165,926,852 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- GAGTCAGAGCGGTATCTTCC -3'
(R):5'- AACCAGTCACTCTTATTGATGACG -3'

Sequencing Primer
(F):5'- CGGTATCTTCCGCGGCG -3'
(R):5'- CAGTCACTCTTATTGATGACGAGGAG -3'

Posted On

2014-08-25