Incidental Mutation 'R2129:Crocc'
ID |
227820 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Crocc
|
Ensembl Gene |
ENSMUSG00000040860 |
Gene Name |
ciliary rootlet coiled-coil, rootletin |
Synonyms |
|
MMRRC Submission |
040132-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.174)
|
Stock # |
R2129 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
4 |
Chromosomal Location |
140743948-140787861 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
G to A
at 140744407 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Arginine to Cysteine
at position 1830
(R1830C)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000126543
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000040222]
[ENSMUST00000071977]
[ENSMUST00000097816]
[ENSMUST00000102491]
[ENSMUST00000168157]
[ENSMUST00000166376]
|
AlphaFold |
Q8CJ40 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000040222
AA Change: R1830C
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000037679 Gene: ENSMUSG00000040860 AA Change: R1830C
Domain | Start | End | E-Value | Type |
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000071977
|
SMART Domains |
Protein: ENSMUSP00000071868 Gene: ENSMUSG00000060572
Domain | Start | End | E-Value | Type |
Pfam:MAGP
|
3 |
153 |
1.2e-62 |
PFAM |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000097816
AA Change: R1830C
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000095425 Gene: ENSMUSG00000040860 AA Change: R1830C
Domain | Start | End | E-Value | Type |
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000102491
AA Change: R1994C
PolyPhen 2
Score 0.995 (Sensitivity: 0.68; Specificity: 0.97)
|
SMART Domains |
Protein: ENSMUSP00000099549 Gene: ENSMUSG00000040860 AA Change: R1994C
Domain | Start | End | E-Value | Type |
low complexity region
|
2 |
15 |
N/A |
INTRINSIC |
low complexity region
|
77 |
93 |
N/A |
INTRINSIC |
Pfam:Rootletin
|
158 |
336 |
9.7e-65 |
PFAM |
low complexity region
|
354 |
381 |
N/A |
INTRINSIC |
internal_repeat_2
|
462 |
479 |
1.77e-6 |
PROSPERO |
low complexity region
|
493 |
514 |
N/A |
INTRINSIC |
internal_repeat_3
|
527 |
557 |
8.63e-6 |
PROSPERO |
internal_repeat_6
|
533 |
556 |
4.21e-5 |
PROSPERO |
low complexity region
|
561 |
575 |
N/A |
INTRINSIC |
low complexity region
|
576 |
594 |
N/A |
INTRINSIC |
low complexity region
|
617 |
638 |
N/A |
INTRINSIC |
low complexity region
|
788 |
807 |
N/A |
INTRINSIC |
low complexity region
|
863 |
880 |
N/A |
INTRINSIC |
low complexity region
|
1009 |
1039 |
N/A |
INTRINSIC |
internal_repeat_4
|
1050 |
1068 |
4.21e-5 |
PROSPERO |
internal_repeat_7
|
1057 |
1070 |
9.31e-5 |
PROSPERO |
internal_repeat_2
|
1057 |
1074 |
1.77e-6 |
PROSPERO |
internal_repeat_4
|
1061 |
1078 |
4.21e-5 |
PROSPERO |
internal_repeat_1
|
1076 |
1101 |
3.36e-8 |
PROSPERO |
internal_repeat_7
|
1192 |
1205 |
9.31e-5 |
PROSPERO |
low complexity region
|
1271 |
1288 |
N/A |
INTRINSIC |
internal_repeat_5
|
1302 |
1328 |
4.21e-5 |
PROSPERO |
low complexity region
|
1354 |
1365 |
N/A |
INTRINSIC |
low complexity region
|
1417 |
1433 |
N/A |
INTRINSIC |
low complexity region
|
1434 |
1453 |
N/A |
INTRINSIC |
low complexity region
|
1461 |
1473 |
N/A |
INTRINSIC |
internal_repeat_6
|
1697 |
1720 |
4.21e-5 |
PROSPERO |
low complexity region
|
1723 |
1740 |
N/A |
INTRINSIC |
coiled coil region
|
1744 |
1871 |
N/A |
INTRINSIC |
coiled coil region
|
1892 |
1996 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000122846
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000124286
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000124506
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000126973
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000151455
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000168157
AA Change: R1830C
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000126543 Gene: ENSMUSG00000040860 AA Change: R1830C
Domain | Start | End | E-Value | Type |
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000137721
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000166376
|
SMART Domains |
Protein: ENSMUSP00000132711 Gene: ENSMUSG00000060572
Domain | Start | End | E-Value | Type |
Pfam:MAGP
|
2 |
153 |
2e-46 |
PFAM |
|
Meta Mutation Damage Score |
0.6467 |
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.3%
- 20x: 95.1%
|
Validation Efficiency |
99% (91/92) |
MGI Phenotype |
PHENOTYPE: Mice homozygous for a null mutation show no apparent functional deficits in phototransduction and ciliary beating in sensory and motile cilia. However, photoreceptors degenerate over time, and lungs appear prone to pathological changes. [provided by MGI curators]
|
Allele List at MGI |
All alleles(4) : Targeted, knock-out(1) Gene trapped(3) |
Other mutations in this stock |
Total: 91 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
1700113H08Rik |
A |
G |
10: 87,066,066 (GRCm39) |
E249G |
possibly damaging |
Het |
2610028H24Rik |
A |
G |
10: 76,293,349 (GRCm39) |
M136V |
possibly damaging |
Het |
4930523C07Rik |
A |
T |
1: 159,902,945 (GRCm39) |
K72* |
probably null |
Het |
Abhd14a |
A |
T |
9: 106,318,064 (GRCm39) |
L125Q |
probably null |
Het |
Abhd17b |
T |
A |
19: 21,658,413 (GRCm39) |
|
probably null |
Het |
Abo |
G |
A |
2: 26,736,586 (GRCm39) |
T61I |
probably benign |
Het |
Adamts15 |
T |
C |
9: 30,815,799 (GRCm39) |
T686A |
probably benign |
Het |
Adgrv1 |
A |
T |
13: 81,705,199 (GRCm39) |
F1537Y |
probably damaging |
Het |
Anxa2 |
A |
T |
9: 69,383,410 (GRCm39) |
Y75F |
possibly damaging |
Het |
Aqp3 |
T |
A |
4: 41,098,061 (GRCm39) |
I17F |
probably benign |
Het |
Aspm |
T |
C |
1: 139,385,373 (GRCm39) |
V339A |
probably benign |
Het |
Bri3bp |
T |
A |
5: 125,528,735 (GRCm39) |
L48* |
probably null |
Het |
Car7 |
T |
A |
8: 105,275,605 (GRCm39) |
C185S |
possibly damaging |
Het |
Casp8ap2 |
T |
C |
4: 32,640,142 (GRCm39) |
Y399H |
probably benign |
Het |
Ces4a |
G |
A |
8: 105,864,729 (GRCm39) |
G69S |
probably damaging |
Het |
Chst10 |
A |
G |
1: 38,904,776 (GRCm39) |
Y203H |
probably benign |
Het |
Clca3a1 |
T |
C |
3: 144,722,526 (GRCm39) |
D282G |
probably damaging |
Het |
Coq3 |
T |
G |
4: 21,900,342 (GRCm39) |
S190A |
probably benign |
Het |
Cygb |
A |
G |
11: 116,540,668 (GRCm39) |
L106P |
probably damaging |
Het |
Dab2 |
G |
T |
15: 6,365,864 (GRCm39) |
E87* |
probably null |
Het |
Dcst1 |
T |
A |
3: 89,264,852 (GRCm39) |
I299F |
probably damaging |
Het |
Dennd4a |
T |
G |
9: 64,813,256 (GRCm39) |
|
probably null |
Het |
Depdc7 |
A |
G |
2: 104,558,518 (GRCm39) |
S168P |
probably benign |
Het |
Dicer1 |
G |
A |
12: 104,688,290 (GRCm39) |
T429I |
probably damaging |
Het |
Dnah5 |
A |
G |
15: 28,408,467 (GRCm39) |
Q3484R |
probably benign |
Het |
Dock2 |
T |
C |
11: 34,618,242 (GRCm39) |
M125V |
probably damaging |
Het |
Dync2h1 |
A |
G |
9: 7,175,289 (GRCm39) |
S107P |
possibly damaging |
Het |
Emb |
T |
C |
13: 117,404,082 (GRCm39) |
V278A |
probably damaging |
Het |
Firrm |
T |
C |
1: 163,794,026 (GRCm39) |
Y518C |
probably damaging |
Het |
Foxk1 |
C |
A |
5: 142,420,943 (GRCm39) |
S189* |
probably null |
Het |
Galm |
T |
C |
17: 80,490,647 (GRCm39) |
I268T |
probably benign |
Het |
Gm5581 |
A |
C |
6: 131,145,247 (GRCm39) |
|
noncoding transcript |
Het |
Gpr6 |
G |
A |
10: 40,947,168 (GRCm39) |
S138L |
possibly damaging |
Het |
Hesx1 |
C |
A |
14: 26,722,802 (GRCm39) |
H42Q |
possibly damaging |
Het |
Hsp90b1 |
T |
C |
10: 86,531,570 (GRCm39) |
D421G |
probably damaging |
Het |
Kctd19 |
T |
C |
8: 106,111,804 (GRCm39) |
T31A |
probably damaging |
Het |
Kif1b |
G |
A |
4: 149,272,097 (GRCm39) |
S1568L |
possibly damaging |
Het |
Krtap19-3 |
T |
C |
16: 88,674,863 (GRCm39) |
|
probably benign |
Het |
Lin28a |
T |
A |
4: 133,745,465 (GRCm39) |
I43F |
probably benign |
Het |
Lrriq1 |
G |
A |
10: 103,050,718 (GRCm39) |
T678I |
probably benign |
Het |
Macf1 |
A |
G |
4: 123,262,608 (GRCm39) |
|
probably benign |
Het |
Madcam1 |
A |
G |
10: 79,501,406 (GRCm39) |
E157G |
possibly damaging |
Het |
Mctp1 |
A |
G |
13: 76,972,941 (GRCm39) |
D648G |
probably damaging |
Het |
Megf8 |
T |
C |
7: 25,030,140 (GRCm39) |
L425P |
probably damaging |
Het |
Mospd4 |
A |
G |
18: 46,598,731 (GRCm39) |
|
noncoding transcript |
Het |
Mybpc1 |
T |
G |
10: 88,387,314 (GRCm39) |
T466P |
probably damaging |
Het |
Myo10 |
T |
C |
15: 25,781,885 (GRCm39) |
Y1127H |
probably benign |
Het |
Myo18b |
A |
T |
5: 112,978,944 (GRCm39) |
L1223Q |
probably damaging |
Het |
Myo9b |
T |
C |
8: 71,786,343 (GRCm39) |
Y670H |
probably damaging |
Het |
Ndufaf4 |
G |
T |
4: 24,898,608 (GRCm39) |
D55Y |
probably damaging |
Het |
Neurod2 |
G |
T |
11: 98,218,414 (GRCm39) |
A250E |
possibly damaging |
Het |
Nherf1 |
A |
T |
11: 115,067,270 (GRCm39) |
I174F |
probably damaging |
Het |
Nipsnap1 |
C |
A |
11: 4,838,932 (GRCm39) |
N119K |
probably benign |
Het |
Npffr2 |
A |
T |
5: 89,715,924 (GRCm39) |
I84F |
probably damaging |
Het |
Or10ab4 |
T |
A |
7: 107,655,111 (GRCm39) |
N307K |
probably benign |
Het |
Or11h23 |
A |
G |
14: 50,948,093 (GRCm39) |
Y102C |
probably damaging |
Het |
Or2t48 |
T |
C |
11: 58,420,437 (GRCm39) |
D125G |
probably damaging |
Het |
Pald1 |
A |
G |
10: 61,184,085 (GRCm39) |
|
probably null |
Het |
Palld |
T |
C |
8: 62,330,395 (GRCm39) |
S161G |
probably benign |
Het |
Paqr9 |
T |
A |
9: 95,443,122 (GRCm39) |
F371I |
probably benign |
Het |
Pear1 |
A |
T |
3: 87,665,666 (GRCm39) |
C120* |
probably null |
Het |
Pla2g4e |
A |
T |
2: 120,013,292 (GRCm39) |
F343I |
probably damaging |
Het |
Plxdc2 |
A |
T |
2: 16,516,902 (GRCm39) |
Y61F |
probably benign |
Het |
Polh |
G |
A |
17: 46,499,014 (GRCm39) |
Q234* |
probably null |
Het |
Prkce |
T |
A |
17: 86,803,463 (GRCm39) |
M454K |
possibly damaging |
Het |
Proser1 |
C |
A |
3: 53,385,366 (GRCm39) |
T416K |
probably benign |
Het |
Prr14l |
G |
T |
5: 32,989,172 (GRCm39) |
|
probably benign |
Het |
Rabgap1l |
A |
T |
1: 160,566,527 (GRCm39) |
D90E |
probably benign |
Het |
Rp1l1 |
T |
A |
14: 64,266,415 (GRCm39) |
V667D |
possibly damaging |
Het |
Rpp40 |
A |
T |
13: 36,082,604 (GRCm39) |
C256* |
probably null |
Het |
Rps6ka5 |
A |
G |
12: 100,644,797 (GRCm39) |
L51P |
probably damaging |
Het |
Rtp2 |
C |
T |
16: 23,746,457 (GRCm39) |
C78Y |
probably damaging |
Het |
Ryr3 |
A |
G |
2: 112,508,715 (GRCm39) |
|
probably benign |
Het |
Slc10a6 |
A |
G |
5: 103,756,922 (GRCm39) |
Y281H |
probably benign |
Het |
Slc6a21 |
T |
G |
7: 44,932,197 (GRCm39) |
|
probably null |
Het |
Smo |
A |
G |
6: 29,757,313 (GRCm39) |
Y476C |
probably damaging |
Het |
Tacr3 |
A |
T |
3: 134,560,621 (GRCm39) |
T187S |
probably damaging |
Het |
Tas1r3 |
G |
A |
4: 155,944,927 (GRCm39) |
R765C |
probably damaging |
Het |
Tasp1 |
T |
C |
2: 139,890,164 (GRCm39) |
K71E |
possibly damaging |
Het |
Tg |
A |
G |
15: 66,566,743 (GRCm39) |
I1264V |
probably benign |
Het |
Tmem41a |
T |
C |
16: 21,764,911 (GRCm39) |
|
probably null |
Het |
Tmem63a |
A |
G |
1: 180,793,105 (GRCm39) |
N459D |
probably benign |
Het |
Ube2k |
A |
G |
5: 65,752,269 (GRCm39) |
T151A |
probably damaging |
Het |
Ubr1 |
T |
C |
2: 120,773,034 (GRCm39) |
E402G |
probably benign |
Het |
Ulk4 |
T |
A |
9: 120,981,248 (GRCm39) |
I897F |
probably benign |
Het |
Usp30 |
A |
G |
5: 114,249,224 (GRCm39) |
E176G |
probably damaging |
Het |
Utp20 |
A |
G |
10: 88,649,917 (GRCm39) |
F431S |
probably damaging |
Het |
Vmn1r206 |
T |
C |
13: 22,804,782 (GRCm39) |
S142G |
probably benign |
Het |
Wdr17 |
C |
T |
8: 55,085,416 (GRCm39) |
V1236M |
probably damaging |
Het |
Zbtb32 |
T |
C |
7: 30,290,918 (GRCm39) |
K126E |
possibly damaging |
Het |
Zeb1 |
A |
T |
18: 5,767,681 (GRCm39) |
S731C |
possibly damaging |
Het |
|
Other mutations in Crocc |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01389:Crocc
|
APN |
4 |
140,749,423 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01474:Crocc
|
APN |
4 |
140,762,703 (GRCm39) |
splice site |
probably benign |
|
IGL01859:Crocc
|
APN |
4 |
140,756,601 (GRCm39) |
missense |
probably benign |
0.07 |
IGL02161:Crocc
|
APN |
4 |
140,761,302 (GRCm39) |
missense |
probably benign |
0.01 |
IGL02244:Crocc
|
APN |
4 |
140,765,231 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02970:Crocc
|
APN |
4 |
140,757,557 (GRCm39) |
missense |
possibly damaging |
0.49 |
N/A:Crocc
|
UTSW |
4 |
140,749,057 (GRCm39) |
missense |
probably damaging |
1.00 |
R0158:Crocc
|
UTSW |
4 |
140,769,553 (GRCm39) |
splice site |
probably benign |
|
R0280:Crocc
|
UTSW |
4 |
140,755,737 (GRCm39) |
missense |
probably damaging |
1.00 |
R0448:Crocc
|
UTSW |
4 |
140,769,502 (GRCm39) |
missense |
probably damaging |
1.00 |
R0532:Crocc
|
UTSW |
4 |
140,757,558 (GRCm39) |
missense |
possibly damaging |
0.95 |
R0597:Crocc
|
UTSW |
4 |
140,744,382 (GRCm39) |
missense |
probably benign |
|
R0597:Crocc
|
UTSW |
4 |
140,747,224 (GRCm39) |
missense |
probably benign |
0.06 |
R0761:Crocc
|
UTSW |
4 |
140,774,387 (GRCm39) |
missense |
probably benign |
0.01 |
R0761:Crocc
|
UTSW |
4 |
140,757,087 (GRCm39) |
missense |
probably benign |
0.00 |
R1238:Crocc
|
UTSW |
4 |
140,762,675 (GRCm39) |
missense |
probably benign |
0.00 |
R1460:Crocc
|
UTSW |
4 |
140,756,551 (GRCm39) |
nonsense |
probably null |
|
R1515:Crocc
|
UTSW |
4 |
140,747,048 (GRCm39) |
missense |
probably benign |
0.00 |
R1557:Crocc
|
UTSW |
4 |
140,752,776 (GRCm39) |
missense |
probably damaging |
0.96 |
R1561:Crocc
|
UTSW |
4 |
140,757,579 (GRCm39) |
missense |
probably damaging |
1.00 |
R1641:Crocc
|
UTSW |
4 |
140,744,388 (GRCm39) |
missense |
probably benign |
0.00 |
R1709:Crocc
|
UTSW |
4 |
140,753,410 (GRCm39) |
critical splice donor site |
probably null |
|
R1785:Crocc
|
UTSW |
4 |
140,749,113 (GRCm39) |
missense |
probably damaging |
0.99 |
R1786:Crocc
|
UTSW |
4 |
140,749,113 (GRCm39) |
missense |
probably damaging |
0.99 |
R1793:Crocc
|
UTSW |
4 |
140,746,620 (GRCm39) |
missense |
probably damaging |
1.00 |
R1897:Crocc
|
UTSW |
4 |
140,746,047 (GRCm39) |
missense |
probably damaging |
1.00 |
R1935:Crocc
|
UTSW |
4 |
140,761,369 (GRCm39) |
missense |
possibly damaging |
0.78 |
R2037:Crocc
|
UTSW |
4 |
140,774,253 (GRCm39) |
critical splice donor site |
probably null |
|
R2127:Crocc
|
UTSW |
4 |
140,744,407 (GRCm39) |
missense |
probably damaging |
1.00 |
R2130:Crocc
|
UTSW |
4 |
140,756,413 (GRCm39) |
missense |
probably benign |
0.04 |
R2136:Crocc
|
UTSW |
4 |
140,760,265 (GRCm39) |
missense |
probably damaging |
1.00 |
R2298:Crocc
|
UTSW |
4 |
140,752,770 (GRCm39) |
missense |
probably benign |
0.30 |
R2847:Crocc
|
UTSW |
4 |
140,746,067 (GRCm39) |
missense |
probably damaging |
0.97 |
R2848:Crocc
|
UTSW |
4 |
140,746,067 (GRCm39) |
missense |
probably damaging |
0.97 |
R2913:Crocc
|
UTSW |
4 |
140,747,661 (GRCm39) |
missense |
probably damaging |
1.00 |
R3415:Crocc
|
UTSW |
4 |
140,773,758 (GRCm39) |
missense |
possibly damaging |
0.75 |
R3416:Crocc
|
UTSW |
4 |
140,773,758 (GRCm39) |
missense |
possibly damaging |
0.75 |
R3417:Crocc
|
UTSW |
4 |
140,773,758 (GRCm39) |
missense |
possibly damaging |
0.75 |
R4082:Crocc
|
UTSW |
4 |
140,761,282 (GRCm39) |
splice site |
probably null |
|
R4454:Crocc
|
UTSW |
4 |
140,747,716 (GRCm39) |
missense |
possibly damaging |
0.52 |
R4591:Crocc
|
UTSW |
4 |
140,745,983 (GRCm39) |
missense |
probably damaging |
1.00 |
R4597:Crocc
|
UTSW |
4 |
140,747,088 (GRCm39) |
missense |
probably damaging |
1.00 |
R4984:Crocc
|
UTSW |
4 |
140,761,763 (GRCm39) |
missense |
probably damaging |
1.00 |
R4992:Crocc
|
UTSW |
4 |
140,773,977 (GRCm39) |
missense |
probably damaging |
0.98 |
R5109:Crocc
|
UTSW |
4 |
140,755,722 (GRCm39) |
missense |
probably damaging |
1.00 |
R5143:Crocc
|
UTSW |
4 |
140,768,350 (GRCm39) |
missense |
probably benign |
0.01 |
R5381:Crocc
|
UTSW |
4 |
140,756,622 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5684:Crocc
|
UTSW |
4 |
140,778,455 (GRCm39) |
missense |
probably damaging |
0.99 |
R5757:Crocc
|
UTSW |
4 |
140,770,875 (GRCm39) |
missense |
probably damaging |
1.00 |
R5795:Crocc
|
UTSW |
4 |
140,769,118 (GRCm39) |
frame shift |
probably null |
|
R5796:Crocc
|
UTSW |
4 |
140,769,118 (GRCm39) |
frame shift |
probably null |
|
R5798:Crocc
|
UTSW |
4 |
140,769,118 (GRCm39) |
frame shift |
probably null |
|
R5815:Crocc
|
UTSW |
4 |
140,762,507 (GRCm39) |
missense |
probably damaging |
0.99 |
R5955:Crocc
|
UTSW |
4 |
140,745,229 (GRCm39) |
missense |
possibly damaging |
0.75 |
R6031:Crocc
|
UTSW |
4 |
140,761,668 (GRCm39) |
critical splice donor site |
probably null |
|
R6063:Crocc
|
UTSW |
4 |
140,773,851 (GRCm39) |
missense |
probably damaging |
1.00 |
R6063:Crocc
|
UTSW |
4 |
140,769,032 (GRCm39) |
missense |
probably benign |
0.08 |
R7086:Crocc
|
UTSW |
4 |
140,774,368 (GRCm39) |
missense |
possibly damaging |
0.47 |
R7282:Crocc
|
UTSW |
4 |
140,749,652 (GRCm39) |
missense |
probably damaging |
1.00 |
R7293:Crocc
|
UTSW |
4 |
140,770,867 (GRCm39) |
missense |
probably benign |
0.17 |
R7404:Crocc
|
UTSW |
4 |
140,753,497 (GRCm39) |
missense |
possibly damaging |
0.46 |
R7571:Crocc
|
UTSW |
4 |
140,773,360 (GRCm39) |
critical splice acceptor site |
probably null |
|
R7646:Crocc
|
UTSW |
4 |
140,748,966 (GRCm39) |
missense |
probably null |
0.94 |
R7782:Crocc
|
UTSW |
4 |
140,752,597 (GRCm39) |
missense |
probably benign |
0.05 |
R8053:Crocc
|
UTSW |
4 |
140,770,230 (GRCm39) |
critical splice donor site |
probably null |
|
R8762:Crocc
|
UTSW |
4 |
140,761,369 (GRCm39) |
missense |
possibly damaging |
0.78 |
R9021:Crocc
|
UTSW |
4 |
140,749,674 (GRCm39) |
missense |
probably benign |
0.00 |
R9188:Crocc
|
UTSW |
4 |
140,747,151 (GRCm39) |
missense |
probably benign |
0.04 |
R9272:Crocc
|
UTSW |
4 |
140,747,132 (GRCm39) |
missense |
probably benign |
0.00 |
R9411:Crocc
|
UTSW |
4 |
140,749,577 (GRCm39) |
critical splice donor site |
probably null |
|
R9647:Crocc
|
UTSW |
4 |
140,774,335 (GRCm39) |
missense |
probably benign |
0.00 |
R9667:Crocc
|
UTSW |
4 |
140,748,988 (GRCm39) |
missense |
probably damaging |
1.00 |
R9706:Crocc
|
UTSW |
4 |
140,746,046 (GRCm39) |
missense |
possibly damaging |
0.76 |
R9780:Crocc
|
UTSW |
4 |
140,756,556 (GRCm39) |
missense |
probably benign |
0.01 |
X0065:Crocc
|
UTSW |
4 |
140,769,103 (GRCm39) |
missense |
possibly damaging |
0.57 |
|
Predicted Primers |
PCR Primer
(F):5'- AAGAGGCTCTTCCAGGAGAG -3'
(R):5'- ATAGACACCTTGCTGCCATG -3'
Sequencing Primer
(F):5'- GTTGTAGCAACTCTGAGAAGCCATC -3'
(R):5'- ACCTTGCTGCCATGAGGGG -3'
|
Posted On |
2014-09-17 |