Incidental Mutation 'R2063:Troap'
ID 228892
Institutional Source Beutler Lab
Gene Symbol Troap
Ensembl Gene ENSMUSG00000032783
Gene Name trophinin associated protein
Synonyms tastin, E130301L11Rik
MMRRC Submission 040068-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.077) question?
Stock # R2063 (G1)
Quality Score 204
Status Not validated
Chromosome 15
Chromosomal Location 98972854-98981290 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 98980344 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Leucine to Proline at position 508 (L508P)
Ref Sequence ENSEMBL: ENSMUSP00000155404 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000039665] [ENSMUST00000064462] [ENSMUST00000230054]
AlphaFold B7ZNG4
Predicted Effect probably benign
Transcript: ENSMUST00000039665
AA Change: L508P

PolyPhen 2 Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)
SMART Domains Protein: ENSMUSP00000035389
Gene: ENSMUSG00000032783
AA Change: L508P

DomainStartEndE-ValueType
low complexity region 232 246 N/A INTRINSIC
low complexity region 390 407 N/A INTRINSIC
low complexity region 468 479 N/A INTRINSIC
low complexity region 499 511 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000064462
SMART Domains Protein: ENSMUSP00000068402
Gene: ENSMUSG00000001076

DomainStartEndE-ValueType
low complexity region 2 13 N/A INTRINSIC
C1Q 103 238 2.34e-34 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000183449
Predicted Effect noncoding transcript
Transcript: ENSMUST00000229224
Predicted Effect noncoding transcript
Transcript: ENSMUST00000229740
Predicted Effect probably benign
Transcript: ENSMUST00000230054
AA Change: L508P

PolyPhen 2 Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.7%
  • 10x: 97.4%
  • 20x: 95.5%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 89 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4933436I01Rik T A X: 66,964,308 (GRCm39) I184L probably benign Het
9530002B09Rik T A 4: 122,583,115 (GRCm39) probably benign Het
Abca15 A T 7: 119,960,127 (GRCm39) T637S possibly damaging Het
Adgrv1 T C 13: 81,709,588 (GRCm39) K1135R possibly damaging Het
Afap1l1 A T 18: 61,872,193 (GRCm39) probably null Het
AI467606 A G 7: 126,692,009 (GRCm39) S195G probably damaging Het
Alox12e G A 11: 70,206,828 (GRCm39) R620W probably damaging Het
Ascc2 A T 11: 4,631,496 (GRCm39) M646L probably benign Het
Ccnt1 A T 15: 98,449,823 (GRCm39) H156Q probably benign Het
Cic T A 7: 24,972,876 (GRCm39) V869E probably damaging Het
Cpsf2 A G 12: 101,949,722 (GRCm39) D118G probably damaging Het
Csnk1g1 A G 9: 65,909,512 (GRCm39) S210G probably damaging Het
Cyp2c40 T A 19: 39,775,224 (GRCm39) M343L probably benign Het
Cyp4a12b A T 4: 115,290,700 (GRCm39) D274V possibly damaging Het
Dnaaf3 T C 7: 4,526,798 (GRCm39) I426M possibly damaging Het
Dnah3 C T 7: 119,551,132 (GRCm39) M3062I probably damaging Het
Dtx2 C T 5: 136,059,431 (GRCm39) S493F probably damaging Het
Elavl2 A T 4: 91,141,687 (GRCm39) S278R possibly damaging Het
Emilin2 T C 17: 71,581,950 (GRCm39) S259G probably benign Het
Endov T C 11: 119,390,408 (GRCm39) F12S probably damaging Het
Faim2 G A 15: 99,412,314 (GRCm39) T140I probably damaging Het
Fbxo21 T C 5: 118,115,031 (GRCm39) S56P probably benign Het
Fgb C A 3: 82,956,996 (GRCm39) D25Y probably benign Het
Foxj2 A T 6: 122,817,200 (GRCm39) H509L probably benign Het
Fth1 T A 19: 9,961,576 (GRCm39) L49Q probably damaging Het
Gbp11 C A 5: 105,476,450 (GRCm39) E220* probably null Het
Gm12695 T C 4: 96,657,963 (GRCm39) T69A probably benign Het
Gm1527 C A 3: 28,980,796 (GRCm39) T632N probably benign Het
Gm4787 A T 12: 81,425,694 (GRCm39) S155T probably benign Het
Gtf2f2 A G 14: 76,155,136 (GRCm39) S142P possibly damaging Het
Helb T C 10: 119,941,671 (GRCm39) Y339C probably benign Het
Hs3st4 A G 7: 123,996,236 (GRCm39) I301V probably benign Het
Hunk A G 16: 90,290,368 (GRCm39) D382G probably damaging Het
Ifnb1 T A 4: 88,440,996 (GRCm39) I6F possibly damaging Het
Il10 T C 1: 130,947,770 (GRCm39) L41P probably damaging Het
Il2rg A G X: 100,311,416 (GRCm39) L57P possibly damaging Het
Invs T A 4: 48,396,287 (GRCm39) L320Q probably damaging Het
Itpr3 G A 17: 27,317,050 (GRCm39) M768I probably benign Het
Krt90 T C 15: 101,466,794 (GRCm39) E263G probably benign Het
Lama2 C T 10: 27,040,922 (GRCm39) C1467Y probably damaging Het
Maco1 A T 4: 134,555,590 (GRCm39) N294K possibly damaging Het
Med24 A G 11: 98,606,472 (GRCm39) L330P probably damaging Het
Mrto4 T C 4: 139,076,334 (GRCm39) K86E probably benign Het
Mtcl1 T C 17: 66,653,350 (GRCm39) R1065G probably damaging Het
Mtmr14 G A 6: 113,217,322 (GRCm39) G38D probably damaging Het
Mtus1 T C 8: 41,535,745 (GRCm39) E657G probably damaging Het
Muc21 T A 17: 35,932,297 (GRCm39) probably benign Het
Myo5c A T 9: 75,189,150 (GRCm39) Q1020L probably benign Het
Nav1 C T 1: 135,376,742 (GRCm39) R1694Q probably damaging Het
Nckap1 T C 2: 80,400,494 (GRCm39) K69R probably damaging Het
Nlrp1b T C 11: 71,051,912 (GRCm39) N1012D probably benign Het
Ntrk2 A C 13: 59,007,111 (GRCm39) K238Q probably damaging Het
Oas1g T C 5: 121,023,946 (GRCm39) E121G probably damaging Het
Or2ab1 A G 11: 58,488,396 (GRCm39) N58S probably damaging Het
Or52n2b T C 7: 104,565,982 (GRCm39) N174D probably benign Het
Pcdh8 A T 14: 80,005,651 (GRCm39) S912R probably damaging Het
Pfpl C T 19: 12,407,237 (GRCm39) S496L probably damaging Het
Phc2 T C 4: 128,640,929 (GRCm39) F672S probably damaging Het
Pkhd1l1 A T 15: 44,414,148 (GRCm39) H2805L possibly damaging Het
Pla2g4a T C 1: 149,716,427 (GRCm39) N678S possibly damaging Het
Plxnb3 T A X: 72,815,357 (GRCm39) Y1845* probably null Het
Polr1a T G 6: 71,913,269 (GRCm39) probably null Het
Prl3d3 A C 13: 27,346,304 (GRCm39) E180D probably benign Het
Prl7a2 T A 13: 27,844,870 (GRCm39) Y172F probably damaging Het
Prpf3 A T 3: 95,751,551 (GRCm39) D383E probably benign Het
Psmc4 A T 7: 27,748,322 (GRCm39) L73H probably damaging Het
Rapgef3 C A 15: 97,664,842 (GRCm39) G7V probably damaging Het
Rasl12 G A 9: 65,318,106 (GRCm39) G157R probably damaging Het
Rnf38 A C 4: 44,149,098 (GRCm39) V83G probably damaging Het
Rnls A C 19: 33,179,944 (GRCm39) S51A probably benign Het
Siglecf A G 7: 43,001,804 (GRCm39) T205A possibly damaging Het
Skint1 T A 4: 111,882,730 (GRCm39) V258D probably benign Het
Slc12a5 C T 2: 164,839,067 (GRCm39) R1072W probably damaging Het
Spata13 GTTAGGCT GT 14: 60,998,320 (GRCm39) probably benign Het
Specc1 T G 11: 62,009,122 (GRCm39) S293A probably benign Het
Speer2 T G 16: 69,657,385 (GRCm39) Q86P probably benign Het
Tbc1d15 T C 10: 115,065,078 (GRCm39) D169G probably benign Het
Tbx20 C A 9: 24,681,067 (GRCm39) E142* probably null Het
Tcp1 T A 17: 13,139,699 (GRCm39) L199H probably damaging Het
Tex26 A T 5: 149,363,204 (GRCm39) R5W probably damaging Het
Tg C A 15: 66,700,402 (GRCm39) A120E probably damaging Het
Thrap3 T C 4: 126,069,189 (GRCm39) Y654C possibly damaging Het
Ubap2 C T 4: 41,199,872 (GRCm39) A752T probably benign Het
Ush1c T C 7: 45,878,905 (GRCm39) Y74C probably damaging Het
Vmn1r55 A G 7: 5,150,048 (GRCm39) V125A possibly damaging Het
Vmn2r120 T A 17: 57,831,553 (GRCm39) H412L possibly damaging Het
Vps54 C T 11: 21,227,955 (GRCm39) T176I probably damaging Het
Wdr95 T C 5: 149,502,627 (GRCm39) probably null Het
Zfp81 T C 17: 33,554,278 (GRCm39) T179A probably benign Het
Other mutations in Troap
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01140:Troap APN 15 98,980,027 (GRCm39) missense probably damaging 1.00
IGL01949:Troap APN 15 98,979,102 (GRCm39) missense probably benign 0.08
IGL02468:Troap APN 15 98,973,242 (GRCm39) missense possibly damaging 0.83
IGL02804:Troap APN 15 98,975,552 (GRCm39) splice site probably null
IGL03224:Troap APN 15 98,979,758 (GRCm39) missense probably benign
R0617:Troap UTSW 15 98,980,541 (GRCm39) missense probably damaging 1.00
R1085:Troap UTSW 15 98,980,044 (GRCm39) missense probably damaging 0.99
R1872:Troap UTSW 15 98,973,233 (GRCm39) splice site probably benign
R1884:Troap UTSW 15 98,975,779 (GRCm39) missense probably benign 0.00
R1937:Troap UTSW 15 98,975,269 (GRCm39) missense probably damaging 1.00
R2065:Troap UTSW 15 98,980,344 (GRCm39) missense probably benign 0.00
R2066:Troap UTSW 15 98,980,344 (GRCm39) missense probably benign 0.00
R2068:Troap UTSW 15 98,980,344 (GRCm39) missense probably benign 0.00
R2087:Troap UTSW 15 98,976,698 (GRCm39) missense possibly damaging 0.84
R2159:Troap UTSW 15 98,975,467 (GRCm39) missense probably damaging 0.96
R4282:Troap UTSW 15 98,976,713 (GRCm39) missense probably benign
R5296:Troap UTSW 15 98,976,698 (GRCm39) missense probably damaging 0.99
R5557:Troap UTSW 15 98,973,675 (GRCm39) missense possibly damaging 0.92
R5652:Troap UTSW 15 98,980,145 (GRCm39) missense probably benign 0.00
R5764:Troap UTSW 15 98,973,300 (GRCm39) missense probably damaging 1.00
R6891:Troap UTSW 15 98,980,569 (GRCm39) missense possibly damaging 0.56
R8008:Troap UTSW 15 98,973,511 (GRCm39) missense probably benign 0.00
R9319:Troap UTSW 15 98,975,444 (GRCm39) missense probably benign 0.01
RF012:Troap UTSW 15 98,973,281 (GRCm39) missense probably benign 0.10
Z1177:Troap UTSW 15 98,975,458 (GRCm39) missense probably null
Predicted Primers PCR Primer
(F):5'- CGACGGCTGAAATTTCTAGAACTC -3'
(R):5'- GAAGGTCAAGCTGGCTGTTG -3'

Sequencing Primer
(F):5'- GAACACAATTCTGGAGCTGC -3'
(R):5'- TGCTGGAGGCCCCTGATTG -3'
Posted On 2014-09-17