Incidental Mutation 'R2146:Dennd3'
ID 233862
Institutional Source Beutler Lab
Gene Symbol Dennd3
Ensembl Gene ENSMUSG00000036661
Gene Name DENN domain containing 3
Synonyms E030003N15Rik
MMRRC Submission 040149-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.189) question?
Stock # R2146 (G1)
Quality Score 225
Status Validated
Chromosome 15
Chromosomal Location 73384409-73444091 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) C to T at 73395345 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Methionine at position 146 (T146M)
Ref Sequence ENSEMBL: ENSMUSP00000134002 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000043414] [ENSMUST00000173292]
AlphaFold A2RT67
Predicted Effect probably damaging
Transcript: ENSMUST00000043414
AA Change: T146M

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000046774
Gene: ENSMUSG00000036661
AA Change: T146M

DomainStartEndE-ValueType
Blast:uDENN 12 161 3e-78 BLAST
DENN 187 373 1.54e-62 SMART
dDENN 436 499 6.81e-14 SMART
WD40 1015 1054 3.68e1 SMART
WD40 1057 1098 3.32e-5 SMART
WD40 1232 1272 1.1e1 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000162488
SMART Domains Protein: ENSMUSP00000125657
Gene: ENSMUSG00000036661

DomainStartEndE-ValueType
low complexity region 5 19 N/A INTRINSIC
Blast:DENN 33 104 5e-28 BLAST
DENN 116 302 1.54e-62 SMART
dDENN 312 376 5.63e-6 SMART
WD40 892 931 3.68e1 SMART
WD40 934 975 3.32e-5 SMART
WD40 1109 1149 1.1e1 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000162824
Predicted Effect probably damaging
Transcript: ENSMUST00000173292
AA Change: T146M

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000134002
Gene: ENSMUSG00000036661
AA Change: T146M

DomainStartEndE-ValueType
Blast:uDENN 12 161 2e-78 BLAST
DENN 187 373 1.54e-62 SMART
dDENN 436 499 6.81e-14 SMART
WD40 1015 1054 3.68e1 SMART
WD40 1057 1098 3.32e-5 SMART
Meta Mutation Damage Score 0.6467 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.4%
  • 20x: 95.4%
Validation Efficiency 99% (84/85)
Allele List at MGI
Other mutations in this stock
Total: 84 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700013D24Rik A T 6: 124,324,803 (GRCm39) probably null Het
9530002B09Rik T A 4: 122,583,198 (GRCm39) C13* probably null Het
Abca12 C A 1: 71,302,647 (GRCm39) V2191L probably benign Het
Adamts18 G C 8: 114,571,635 (GRCm39) A116G possibly damaging Het
Anxa2 TCCC TCC 9: 69,397,036 (GRCm39) probably null Het
Arfgef1 C T 1: 10,270,103 (GRCm39) A349T probably benign Het
Arhgap6 A G X: 167,579,496 (GRCm39) T94A probably benign Het
Arhgef5 T C 6: 43,260,252 (GRCm39) S1413P probably damaging Het
Atg4c C A 4: 99,109,463 (GRCm39) N143K possibly damaging Het
C1qtnf12 A G 4: 156,050,922 (GRCm39) N297S probably benign Het
Cadps2 G T 6: 23,838,998 (GRCm39) probably benign Het
Ccdc185 G T 1: 182,575,085 (GRCm39) H535N possibly damaging Het
Ccdc57 A G 11: 120,776,051 (GRCm39) probably benign Het
Cd163 A G 6: 124,286,167 (GRCm39) H239R probably damaging Het
Ceacam2 G T 7: 25,227,368 (GRCm39) C166* probably null Het
Ces5a T A 8: 94,261,327 (GRCm39) E33D probably benign Het
Chl1 T C 6: 103,692,362 (GRCm39) probably null Het
Chsy3 G A 18: 59,309,544 (GRCm39) V266I probably benign Het
Cpa5 G T 6: 30,626,821 (GRCm39) R251L probably damaging Het
Cps1 A C 1: 67,191,538 (GRCm39) probably benign Het
Csmd3 CCTTTGCGCTT CCTT 15: 47,604,632 (GRCm39) probably null Het
Cstf1 T C 2: 172,217,683 (GRCm39) Y99H probably damaging Het
Cyp2j11 G A 4: 96,204,595 (GRCm39) T317I probably damaging Het
Dcaf8l T C X: 88,449,883 (GRCm39) D82G possibly damaging Het
Dnah2 T C 11: 69,406,587 (GRCm39) M552V probably benign Het
Dnajc22 T C 15: 99,002,264 (GRCm39) V303A probably benign Het
Dtx2 T G 5: 136,059,464 (GRCm39) L458R probably benign Het
Fat3 A T 9: 15,901,808 (GRCm39) F3072L probably benign Het
Fgf5 T C 5: 98,423,409 (GRCm39) *265R probably null Het
Fndc11 A G 2: 180,863,918 (GRCm39) E241G probably damaging Het
Glb1 T C 9: 114,279,716 (GRCm39) Y375H probably damaging Het
Gm4922 T G 10: 18,659,264 (GRCm39) Q486P probably benign Het
Gm5786 A T 12: 59,128,084 (GRCm39) noncoding transcript Het
Hepacam2 A T 6: 3,463,378 (GRCm39) probably benign Het
Ints9 G A 14: 65,223,792 (GRCm39) G89R possibly damaging Het
Iqcm T A 8: 76,615,241 (GRCm39) W441R probably damaging Het
Itga10 T C 3: 96,558,808 (GRCm39) L382P possibly damaging Het
Itga10 G T 3: 96,561,039 (GRCm39) G635W probably damaging Het
Kbtbd2 A G 6: 56,756,075 (GRCm39) Y554H probably damaging Het
Kif1b T C 4: 149,268,766 (GRCm39) K1649R probably damaging Het
L1cam A T X: 72,904,747 (GRCm39) F536Y probably damaging Het
Magee1 A T X: 104,166,564 (GRCm39) D783V probably damaging Het
Marveld3 A T 8: 110,686,434 (GRCm39) V144E probably benign Het
Mcam T C 9: 44,047,932 (GRCm39) V59A probably damaging Het
Mdga2 C T 12: 66,915,515 (GRCm39) E47K probably damaging Het
Metrn T A 17: 26,015,601 (GRCm39) E38V probably damaging Het
Mfrp T C 9: 44,015,015 (GRCm39) L314P probably benign Het
Mgat4f T A 1: 134,318,251 (GRCm39) M341K probably damaging Het
Mideas G T 12: 84,219,809 (GRCm39) P382T probably damaging Het
Mospd2 A G X: 163,739,473 (GRCm39) probably null Het
Mycbp2 G A 14: 103,393,358 (GRCm39) H3068Y probably damaging Het
Myh6 C T 14: 55,191,228 (GRCm39) R871H probably damaging Het
Nup214 C T 2: 31,924,478 (GRCm39) S1669F probably damaging Het
Or13c7b A G 4: 43,821,178 (GRCm39) F61S probably damaging Het
Or5b111 T C 19: 13,291,485 (GRCm39) T55A probably benign Het
Or8i2 T A 2: 86,852,009 (GRCm39) N293I probably damaging Het
Parvb A G 15: 84,116,369 (GRCm39) K33E possibly damaging Het
Pdcd11 A G 19: 47,093,191 (GRCm39) M490V probably benign Het
Pkd2 A C 5: 104,603,456 (GRCm39) probably benign Het
Reps1 T A 10: 17,969,061 (GRCm39) D206E probably benign Het
Rimkla T A 4: 119,331,779 (GRCm39) M140L possibly damaging Het
Rnf13 T G 3: 57,709,907 (GRCm39) I150S probably null Het
Rxfp4 C T 3: 88,560,200 (GRCm39) A84T probably damaging Het
Serpinb8 T A 1: 107,533,657 (GRCm39) D237E probably benign Het
Sgo2b T G 8: 64,381,057 (GRCm39) T592P probably benign Het
Slc35d1 A T 4: 103,062,349 (GRCm39) I228N probably damaging Het
Slc39a1 T G 3: 90,156,757 (GRCm39) H104Q probably benign Het
Slc6a6 T C 6: 91,712,161 (GRCm39) V230A probably benign Het
Slc9a3 A G 13: 74,269,722 (GRCm39) E30G probably benign Het
Slc9c1 A G 16: 45,413,827 (GRCm39) Y985C probably benign Het
Supt6 A G 11: 78,121,758 (GRCm39) F298S probably damaging Het
Tada2a T C 11: 83,970,455 (GRCm39) D432G probably damaging Het
Thoc2l T C 5: 104,666,857 (GRCm39) F460L probably benign Het
Tmem131 C A 1: 36,851,690 (GRCm39) V938L probably benign Het
Tnpo3 A G 6: 29,589,035 (GRCm39) V105A probably benign Het
Ttc7 T C 17: 87,654,135 (GRCm39) probably benign Het
Ttn T C 2: 76,727,532 (GRCm39) probably benign Het
Usp16 T C 16: 87,270,075 (GRCm39) probably null Het
Usp36 A G 11: 118,159,491 (GRCm39) L486S probably benign Het
Uty T C Y: 1,239,816 (GRCm39) I72V probably benign Het
Vps51 A G 19: 6,118,164 (GRCm39) V777A probably benign Het
Zfp160 A G 17: 21,247,244 (GRCm39) K598R probably benign Het
Zfp39 T C 11: 58,781,158 (GRCm39) N535D probably benign Het
Zfp804a A G 2: 82,089,008 (GRCm39) T946A probably benign Het
Other mutations in Dennd3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00089:Dennd3 APN 15 73,438,982 (GRCm39) missense probably benign 0.26
IGL00579:Dennd3 APN 15 73,412,691 (GRCm39) missense possibly damaging 0.63
IGL02101:Dennd3 APN 15 73,399,794 (GRCm39) missense possibly damaging 0.81
IGL02164:Dennd3 APN 15 73,416,297 (GRCm39) missense probably benign 0.26
IGL02389:Dennd3 APN 15 73,438,905 (GRCm39) missense probably damaging 1.00
IGL02604:Dennd3 APN 15 73,428,252 (GRCm39) missense probably damaging 1.00
IGL02697:Dennd3 APN 15 73,396,085 (GRCm39) missense possibly damaging 0.82
IGL02885:Dennd3 APN 15 73,440,545 (GRCm39) missense probably benign
IGL03356:Dennd3 APN 15 73,440,482 (GRCm39) missense probably benign 0.19
IGL03388:Dennd3 APN 15 73,416,208 (GRCm39) missense probably damaging 0.98
BB006:Dennd3 UTSW 15 73,436,423 (GRCm39) missense probably damaging 1.00
BB016:Dennd3 UTSW 15 73,436,423 (GRCm39) missense probably damaging 1.00
R0118:Dennd3 UTSW 15 73,436,925 (GRCm39) missense probably damaging 1.00
R0925:Dennd3 UTSW 15 73,405,284 (GRCm39) missense probably damaging 1.00
R1076:Dennd3 UTSW 15 73,412,582 (GRCm39) missense probably damaging 1.00
R1355:Dennd3 UTSW 15 73,412,703 (GRCm39) splice site probably benign
R1370:Dennd3 UTSW 15 73,412,703 (GRCm39) splice site probably benign
R1480:Dennd3 UTSW 15 73,404,695 (GRCm39) missense probably benign 0.20
R1727:Dennd3 UTSW 15 73,436,977 (GRCm39) missense possibly damaging 0.95
R1732:Dennd3 UTSW 15 73,409,267 (GRCm39) splice site probably benign
R1771:Dennd3 UTSW 15 73,426,950 (GRCm39) missense possibly damaging 0.71
R1776:Dennd3 UTSW 15 73,426,950 (GRCm39) missense possibly damaging 0.71
R1779:Dennd3 UTSW 15 73,394,357 (GRCm39) critical splice donor site probably null
R1838:Dennd3 UTSW 15 73,436,949 (GRCm39) missense probably damaging 1.00
R2146:Dennd3 UTSW 15 73,426,909 (GRCm39) missense probably benign 0.35
R2147:Dennd3 UTSW 15 73,395,336 (GRCm39) missense probably damaging 1.00
R2148:Dennd3 UTSW 15 73,426,909 (GRCm39) missense probably benign 0.35
R2149:Dennd3 UTSW 15 73,426,909 (GRCm39) missense probably benign 0.35
R2150:Dennd3 UTSW 15 73,426,909 (GRCm39) missense probably benign 0.35
R2174:Dennd3 UTSW 15 73,427,154 (GRCm39) missense probably damaging 1.00
R2295:Dennd3 UTSW 15 73,395,404 (GRCm39) critical splice donor site probably null
R2905:Dennd3 UTSW 15 73,429,495 (GRCm39) missense probably damaging 1.00
R3106:Dennd3 UTSW 15 73,436,973 (GRCm39) nonsense probably null
R3757:Dennd3 UTSW 15 73,394,083 (GRCm39) missense probably benign 0.00
R3785:Dennd3 UTSW 15 73,419,426 (GRCm39) missense possibly damaging 0.89
R3786:Dennd3 UTSW 15 73,419,426 (GRCm39) missense possibly damaging 0.89
R3787:Dennd3 UTSW 15 73,419,426 (GRCm39) missense possibly damaging 0.89
R3847:Dennd3 UTSW 15 73,414,581 (GRCm39) missense possibly damaging 0.64
R4369:Dennd3 UTSW 15 73,412,658 (GRCm39) missense probably damaging 0.98
R4601:Dennd3 UTSW 15 73,439,009 (GRCm39) missense probably damaging 0.99
R4666:Dennd3 UTSW 15 73,442,709 (GRCm39) missense probably damaging 1.00
R4680:Dennd3 UTSW 15 73,405,225 (GRCm39) missense possibly damaging 0.82
R4708:Dennd3 UTSW 15 73,395,344 (GRCm39) missense probably damaging 1.00
R4789:Dennd3 UTSW 15 73,394,131 (GRCm39) missense probably damaging 1.00
R4920:Dennd3 UTSW 15 73,412,574 (GRCm39) missense probably benign 0.13
R5043:Dennd3 UTSW 15 73,399,785 (GRCm39) missense probably benign 0.00
R5074:Dennd3 UTSW 15 73,419,144 (GRCm39) missense probably damaging 1.00
R5410:Dennd3 UTSW 15 73,419,297 (GRCm39) missense probably benign 0.02
R5421:Dennd3 UTSW 15 73,438,964 (GRCm39) missense probably benign
R5560:Dennd3 UTSW 15 73,404,744 (GRCm39) missense probably damaging 1.00
R6008:Dennd3 UTSW 15 73,438,929 (GRCm39) missense possibly damaging 0.88
R6357:Dennd3 UTSW 15 73,428,321 (GRCm39) missense possibly damaging 0.49
R6563:Dennd3 UTSW 15 73,416,229 (GRCm39) missense probably damaging 0.98
R6687:Dennd3 UTSW 15 73,428,215 (GRCm39) missense possibly damaging 0.64
R6837:Dennd3 UTSW 15 73,429,542 (GRCm39) missense probably damaging 1.00
R6910:Dennd3 UTSW 15 73,426,965 (GRCm39) missense probably benign 0.01
R7125:Dennd3 UTSW 15 73,405,140 (GRCm39) missense possibly damaging 0.50
R7297:Dennd3 UTSW 15 73,429,459 (GRCm39) missense probably damaging 1.00
R7524:Dennd3 UTSW 15 73,396,095 (GRCm39) nonsense probably null
R7580:Dennd3 UTSW 15 73,428,296 (GRCm39) missense possibly damaging 0.89
R7653:Dennd3 UTSW 15 73,434,275 (GRCm39) missense probably damaging 0.99
R7731:Dennd3 UTSW 15 73,434,216 (GRCm39) missense probably damaging 0.99
R7767:Dennd3 UTSW 15 73,394,079 (GRCm39) missense probably benign
R7806:Dennd3 UTSW 15 73,442,624 (GRCm39) missense possibly damaging 0.87
R7860:Dennd3 UTSW 15 73,412,657 (GRCm39) missense probably damaging 0.97
R7902:Dennd3 UTSW 15 73,439,964 (GRCm39) critical splice donor site probably benign
R7929:Dennd3 UTSW 15 73,436,423 (GRCm39) missense probably damaging 1.00
R8218:Dennd3 UTSW 15 73,384,622 (GRCm39) missense probably benign 0.31
R8436:Dennd3 UTSW 15 73,434,198 (GRCm39) missense probably damaging 1.00
R8444:Dennd3 UTSW 15 73,442,672 (GRCm39) missense probably benign 0.09
R8698:Dennd3 UTSW 15 73,394,154 (GRCm39) missense possibly damaging 0.52
R8967:Dennd3 UTSW 15 73,419,426 (GRCm39) missense possibly damaging 0.89
R9147:Dennd3 UTSW 15 73,429,463 (GRCm39) missense probably damaging 1.00
R9148:Dennd3 UTSW 15 73,429,463 (GRCm39) missense probably damaging 1.00
R9194:Dennd3 UTSW 15 73,419,153 (GRCm39) missense probably benign 0.04
R9449:Dennd3 UTSW 15 73,429,477 (GRCm39) missense probably damaging 1.00
R9501:Dennd3 UTSW 15 73,419,041 (GRCm39) missense probably benign 0.01
R9616:Dennd3 UTSW 15 73,440,563 (GRCm39) missense probably benign
R9730:Dennd3 UTSW 15 73,426,959 (GRCm39) missense probably damaging 1.00
RF006:Dennd3 UTSW 15 73,419,441 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- TCAAAGCTCCGGGTGGTTAG -3'
(R):5'- CAAGAAAATGTTCTGGAGGCC -3'

Sequencing Primer
(F):5'- GTAGGGGAAGTGTGCTCTCCAC -3'
(R):5'- TGGAAACTCAACGTCTCAGAGTC -3'
Posted On 2014-10-01