Mutagenetix > Incidental Mutation

Incidental Mutation 'R2168:Nol10'

235622

Institutional Source

Beutler Lab

Gene Symbol

Nol10

Ensembl Gene

ENSMUSG00000061458

Gene Name

nucleolar protein 10

Synonyms

LOC217431

MMRRC Submission

040171-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.969) question?

Stock #

R2168 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

17398459-17480096 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 17423585 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Valine at position 310 (E310V)

Ref Sequence

ENSEMBL: ENSMUSP00000035930 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000046011]

AlphaFold

Q5RJG1

Predicted Effect

probably damaging
Transcript: ENSMUST00000046011
AA Change: E310V

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000035930
Gene: ENSMUSG00000061458
AA Change: E310V

Domain	Start	End	E-Value	Type
WD40	42	81	1.1e1	SMART
Blast:WD40	84	123	1e-8	BLAST
WD40	165	204	3.3e1	SMART
WD40	223	257	4.42e1	SMART
WD40	260	299	1.19e1	SMART
WD40	302	340	1.97e2	SMART
low complexity region	451	476	N/A	INTRINSIC
Pfam:NUC153	482	509	1.4e-15	PFAM
low complexity region	515	536	N/A	INTRINSIC
low complexity region	542	553	N/A	INTRINSIC
coiled coil region	557	588	N/A	INTRINSIC
low complexity region	650	660	N/A	INTRINSIC

Meta Mutation Damage Score

0.8442

Coding Region Coverage

1x: 99.2%
3x: 98.6%
10x: 97.4%
20x: 95.5%

Validation Efficiency

100% (62/62)

Allele List at MGI

Other mutations in this stock

Total: 59 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acoxl	T	A	2: 127,720,701 (GRCm39)	I188N	probably damaging	Het
Akr1c14	T	C	13: 4,131,106 (GRCm39)	V266A	probably damaging	Het
Als2cl	C	A	9: 110,717,810 (GRCm39)	P301H	probably damaging	Het
Arsi	G	A	18: 61,049,723 (GRCm39)	G202E	probably benign	Het
Catspere2	C	T	1: 177,843,477 (GRCm39)		probably benign	Het
Cpsf1	A	T	15: 76,487,937 (GRCm39)	N53K	possibly damaging	Het
Ctsll3	C	T	13: 60,948,749 (GRCm39)	G69R	possibly damaging	Het
F2	C	T	2: 91,458,693 (GRCm39)	R539Q	probably damaging	Het
Fam78b	G	A	1: 166,906,219 (GRCm39)	G126D	probably damaging	Het
Fancd2	A	G	6: 113,568,120 (GRCm39)	I1332V	possibly damaging	Het
Flg2	C	T	3: 93,109,244 (GRCm39)	S424L	probably damaging	Het
Fpr1	T	C	17: 18,097,471 (GRCm39)	T173A	possibly damaging	Het
Gas2l3	A	G	10: 89,249,960 (GRCm39)	V386A	probably benign	Het
Gdap2	A	C	3: 100,095,199 (GRCm39)	E269A	probably benign	Het
Igf2bp2	T	A	16: 21,898,358 (GRCm39)		probably null	Het
Ipo11	T	C	13: 107,016,118 (GRCm39)		probably null	Het
Itpr2	G	T	6: 146,013,176 (GRCm39)	P2667Q	probably benign	Het
Itsn2	G	T	12: 4,683,044 (GRCm39)		probably benign	Het
Jakmip2	A	G	18: 43,698,995 (GRCm39)	L488P	probably damaging	Het
Lrp1b	A	T	2: 41,265,858 (GRCm39)	C248S	probably damaging	Het
Lrrc17	A	T	5: 21,780,046 (GRCm39)	D340V	probably damaging	Het
Megf9	T	C	4: 70,351,679 (GRCm39)	T481A	probably damaging	Het
Mrc1	T	C	2: 14,249,015 (GRCm39)	S184P	possibly damaging	Het
Msh4	A	T	3: 153,573,472 (GRCm39)	Y533*	probably null	Het
Mug1	A	G	6: 121,847,458 (GRCm39)	N612S	probably benign	Het
Nectin2	G	T	7: 19,464,539 (GRCm39)	S288R	probably damaging	Het
Neurog2	A	T	3: 127,427,754 (GRCm39)	H126L	probably damaging	Het
Or1f12	T	G	13: 21,721,422 (GRCm39)	K251T	probably damaging	Het
Or4c29	A	G	2: 88,740,522 (GRCm39)	S72P	probably damaging	Het
Or51h7	A	T	7: 102,591,678 (GRCm39)	F35L	probably benign	Het
Or5h23	T	A	16: 58,905,949 (GRCm39)	K299I	probably benign	Het
Pappa	A	C	4: 65,074,682 (GRCm39)	D412A	probably damaging	Het
Pcdhb7	T	A	18: 37,476,335 (GRCm39)	F490L	probably benign	Het
Pcsk1	T	A	13: 75,260,653 (GRCm39)		probably benign	Het
Plekhn1	T	A	4: 156,306,339 (GRCm39)	D577V	probably damaging	Het
Prrc2c	C	A	1: 162,537,903 (GRCm39)		probably benign	Het
Ptch1	T	G	13: 63,672,773 (GRCm39)	E944A	probably benign	Het
Pzp	G	A	6: 128,465,010 (GRCm39)	T1288M	probably damaging	Het
Radil	A	C	5: 142,492,718 (GRCm39)	H63Q	probably benign	Het
Rai1	T	C	11: 60,078,422 (GRCm39)	S829P	probably benign	Het
Rd3	A	G	1: 191,715,488 (GRCm39)	I88V	probably damaging	Het
Rfesd	T	C	13: 76,156,244 (GRCm39)	D54G	probably damaging	Het
Rnf213	A	C	11: 119,305,896 (GRCm39)	K568T	probably damaging	Het
Scaper	T	A	9: 55,650,923 (GRCm39)	K913N	probably damaging	Het
Serpina3c	T	C	12: 104,115,628 (GRCm39)		probably null	Het
Serpinb6d	A	T	13: 33,850,357 (GRCm39)	K61N	probably benign	Het
Skint4	A	T	4: 111,944,183 (GRCm39)		probably null	Het
Sod1	T	C	16: 90,017,801 (GRCm39)	I19T	possibly damaging	Het
Stfa3	C	A	16: 36,271,042 (GRCm39)	G81*	probably null	Het
Ubr4	A	G	4: 139,137,960 (GRCm39)	T1106A	probably benign	Het
Uggt2	T	A	14: 119,256,917 (GRCm39)	N1106Y	probably damaging	Het
Vmn1r217	G	A	13: 23,298,714 (GRCm39)	Q63*	probably null	Het
Vmn2r129	A	T	4: 156,690,673 (GRCm39)		noncoding transcript	Het
Vps13b	C	A	15: 35,792,334 (GRCm39)	P2201T	probably damaging	Het
Vps13b	C	A	15: 35,792,335 (GRCm39)	P2201Q	probably damaging	Het
Vps13d	G	T	4: 144,813,893 (GRCm39)		probably benign	Het
Zer1	A	G	2: 29,994,887 (GRCm39)	C503R	probably damaging	Het
Zfp369	T	C	13: 65,444,762 (GRCm39)	V635A	probably benign	Het
Zfp608	A	T	18: 55,031,125 (GRCm39)	Y938*	probably null	Het

Other mutations in Nol10

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00916:Nol10	APN	12	17,411,130 (GRCm39)	splice site	probably benign
R1769:Nol10	UTSW	12	17,466,709 (GRCm39)	splice site	probably benign
R1884:Nol10	UTSW	12	17,418,390 (GRCm39)	critical splice donor site	probably null
R1930:Nol10	UTSW	12	17,398,555 (GRCm39)	start codon destroyed	probably null	0.99
R1931:Nol10	UTSW	12	17,398,555 (GRCm39)	start codon destroyed	probably null	0.99
R2010:Nol10	UTSW	12	17,466,102 (GRCm39)	missense	probably benign	0.00
R2037:Nol10	UTSW	12	17,411,152 (GRCm39)	missense	probably benign	0.01
R3729:Nol10	UTSW	12	17,474,674 (GRCm39)	missense	probably benign	0.42
R3731:Nol10	UTSW	12	17,474,674 (GRCm39)	missense	probably benign	0.42
R4368:Nol10	UTSW	12	17,429,293 (GRCm39)	missense	probably damaging	1.00
R4618:Nol10	UTSW	12	17,398,562 (GRCm39)	missense	probably damaging	0.98
R4736:Nol10	UTSW	12	17,405,288 (GRCm39)	missense	probably damaging	1.00
R5342:Nol10	UTSW	12	17,419,621 (GRCm39)	splice site	probably null
R5451:Nol10	UTSW	12	17,409,103 (GRCm39)	nonsense	probably null
R5536:Nol10	UTSW	12	17,466,138 (GRCm39)	nonsense	probably null
R5586:Nol10	UTSW	12	17,466,829 (GRCm39)	missense	possibly damaging	0.73
R6045:Nol10	UTSW	12	17,398,479 (GRCm39)	start gained	probably benign
R6833:Nol10	UTSW	12	17,402,728 (GRCm39)	missense	probably benign	0.03
R7039:Nol10	UTSW	12	17,479,185 (GRCm39)	missense	possibly damaging	0.94
R7189:Nol10	UTSW	12	17,423,562 (GRCm39)	critical splice acceptor site	probably null
R7251:Nol10	UTSW	12	17,452,108 (GRCm39)	missense	probably damaging	1.00
R7399:Nol10	UTSW	12	17,452,174 (GRCm39)	missense	probably damaging	1.00
R7600:Nol10	UTSW	12	17,419,481 (GRCm39)	missense	probably damaging	0.99
R7650:Nol10	UTSW	12	17,412,683 (GRCm39)	critical splice donor site	probably null
R7729:Nol10	UTSW	12	17,474,676 (GRCm39)	missense	possibly damaging	0.62
R7772:Nol10	UTSW	12	17,398,586 (GRCm39)	missense	probably damaging	1.00
R7869:Nol10	UTSW	12	17,408,239 (GRCm39)	missense	probably null	0.93
R7972:Nol10	UTSW	12	17,402,648 (GRCm39)	missense	probably benign	0.15
R8686:Nol10	UTSW	12	17,419,772 (GRCm39)	intron	probably benign
R8926:Nol10	UTSW	12	17,466,871 (GRCm39)	missense	probably benign	0.00
R8936:Nol10	UTSW	12	17,466,863 (GRCm39)	missense	probably benign	0.08
R8966:Nol10	UTSW	12	17,419,507 (GRCm39)	missense	possibly damaging	0.64
R8994:Nol10	UTSW	12	17,402,717 (GRCm39)	missense	probably damaging	1.00
R9002:Nol10	UTSW	12	17,408,134 (GRCm39)	missense	probably damaging	1.00
R9096:Nol10	UTSW	12	17,466,199 (GRCm39)	missense	probably benign
R9196:Nol10	UTSW	12	17,455,316 (GRCm39)	missense	probably benign	0.04
R9548:Nol10	UTSW	12	17,466,144 (GRCm39)	missense	possibly damaging	0.49
Z1177:Nol10	UTSW	12	17,409,089 (GRCm39)	critical splice acceptor site	probably null

Predicted Primers

PCR Primer
(F):5'- GGCCGTCTGATATGCTGATAAG -3'
(R):5'- TGAGTACTGAGTCATGAGCGC -3'

Sequencing Primer
(F):5'- CCGTCTGATATGCTGATAAGACAGAG -3'
(R):5'- GAGTCATGAGCGCCTTTCTGAATC -3'

Posted On

2014-10-01