Incidental Mutation 'R2182:Vmn2r60'
ID 237235
Institutional Source Beutler Lab
Gene Symbol Vmn2r60
Ensembl Gene ENSMUSG00000090619
Gene Name vomeronasal 2, receptor 60
Synonyms Casr-rs3, EG637898, Gprc2a-rs3
MMRRC Submission 040184-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.100) question?
Stock # R2182 (G1)
Quality Score 225
Status Not validated
Chromosome 7
Chromosomal Location 41765895-41845200 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 41844931 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Alanine at position 765 (T765A)
Ref Sequence ENSEMBL: ENSMUSP00000128493 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000166447]
AlphaFold A0A3B2WBC8
Predicted Effect probably benign
Transcript: ENSMUST00000166447
AA Change: T765A

PolyPhen 2 Score 0.058 (Sensitivity: 0.94; Specificity: 0.84)
SMART Domains Protein: ENSMUSP00000128493
Gene: ENSMUSG00000090619
AA Change: T765A

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Pfam:ANF_receptor 78 471 1.2e-44 PFAM
Pfam:NCD3G 514 567 5.1e-23 PFAM
Pfam:7tm_3 600 835 1.4e-51 PFAM
Coding Region Coverage
  • 1x: 99.3%
  • 3x: 98.7%
  • 10x: 97.5%
  • 20x: 95.6%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 51 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930550C14Rik A G 9: 53,334,243 (GRCm39) H17R probably damaging Het
Abca15 G A 7: 119,939,450 (GRCm39) W281* probably null Het
Aloxe3 G A 11: 69,020,426 (GRCm39) V157M possibly damaging Het
Arhgap26 G T 18: 39,490,862 (GRCm39) probably benign Het
Atp7b T C 8: 22,504,563 (GRCm39) N698S probably damaging Het
Clec4a4 A G 6: 122,990,716 (GRCm39) probably null Het
Clgn C T 8: 84,137,039 (GRCm39) T252I possibly damaging Het
Cyp2a12 A T 7: 26,730,571 (GRCm39) N179Y probably damaging Het
D630045J12Rik C T 6: 38,151,082 (GRCm39) probably null Het
Dennd5a G T 7: 109,533,201 (GRCm39) R190S probably benign Het
Dtx4 C A 19: 12,460,471 (GRCm39) G384V probably null Het
Dxo T C 17: 35,057,868 (GRCm39) V191A probably benign Het
Eprs1 G A 1: 185,111,939 (GRCm39) probably null Het
Fntb A G 12: 76,909,309 (GRCm39) N99S probably benign Het
Gm5773 T A 3: 93,680,820 (GRCm39) I164K probably benign Het
Golm2 A G 2: 121,697,909 (GRCm39) D75G probably damaging Het
Hyal5 T C 6: 24,877,879 (GRCm39) I325T probably damaging Het
Igsf8 G A 1: 172,118,295 (GRCm39) probably null Het
Lamc2 A G 1: 153,002,612 (GRCm39) V17A possibly damaging Het
Lpxn T C 19: 12,810,122 (GRCm39) probably null Het
Macf1 A G 4: 123,386,464 (GRCm39) V1296A probably damaging Het
Mpdz A T 4: 81,266,959 (GRCm39) L318Q probably damaging Het
Mpl T A 4: 118,314,610 (GRCm39) Q13L probably benign Het
Mpnd A G 17: 56,322,964 (GRCm39) S399G probably benign Het
Mrps5 T C 2: 127,444,407 (GRCm39) L347P probably damaging Het
Naip1 T A 13: 100,550,188 (GRCm39) Q1217H probably benign Het
Nav2 G A 7: 49,247,002 (GRCm39) V2176I probably benign Het
Obi1 A G 14: 104,743,612 (GRCm39) S156P possibly damaging Het
Or13p3 T C 4: 118,567,542 (GRCm39) *313R probably null Het
Or7g33 T C 9: 19,448,638 (GRCm39) N196S probably benign Het
Or8b43 A G 9: 38,360,420 (GRCm39) N84S probably benign Het
Or8g36 A T 9: 39,422,722 (GRCm39) M98K probably damaging Het
Pbx2 C A 17: 34,814,640 (GRCm39) Y324* probably null Het
Pcsk7 T A 9: 45,839,917 (GRCm39) C702S probably benign Het
Pramel11 T A 4: 143,623,760 (GRCm39) H138L possibly damaging Het
Rictor T C 15: 6,801,685 (GRCm39) S458P probably damaging Het
Scaf4 T C 16: 90,027,028 (GRCm39) M905V probably benign Het
Scarf2 T C 16: 17,620,886 (GRCm39) C185R probably damaging Het
Scd1 T G 19: 44,391,732 (GRCm39) I101L probably benign Het
Slc6a2 A G 8: 93,687,876 (GRCm39) M1V probably null Het
Sost T C 11: 101,854,676 (GRCm39) Y211C probably damaging Het
Sphkap A G 1: 83,254,405 (GRCm39) S828P probably damaging Het
Tnn T C 1: 159,968,170 (GRCm39) probably null Het
Tnrc18 T C 5: 142,745,816 (GRCm39) K1319R unknown Het
Vmn2r91 C A 17: 18,325,691 (GRCm39) T103K possibly damaging Het
Zbtb44 T C 9: 30,977,972 (GRCm39) C429R possibly damaging Het
Zc3h4 G A 7: 16,156,441 (GRCm39) G327D unknown Het
Zfp292 A G 4: 34,807,417 (GRCm39) C1876R probably damaging Het
Zfp839 C T 12: 110,834,772 (GRCm39) L676F probably damaging Het
Zg16 A G 7: 126,649,544 (GRCm39) L139P probably damaging Het
Zscan12 A G 13: 21,552,961 (GRCm39) I262V probably benign Het
Other mutations in Vmn2r60
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01622:Vmn2r60 APN 7 41,785,910 (GRCm39) missense probably benign 0.09
IGL01623:Vmn2r60 APN 7 41,785,910 (GRCm39) missense probably benign 0.09
IGL02363:Vmn2r60 APN 7 41,844,578 (GRCm39) missense probably benign 0.02
IGL02485:Vmn2r60 APN 7 41,844,890 (GRCm39) missense possibly damaging 0.54
IGL02651:Vmn2r60 APN 7 41,845,010 (GRCm39) missense probably damaging 0.99
IGL02660:Vmn2r60 APN 7 41,791,720 (GRCm39) nonsense probably null
IGL03135:Vmn2r60 APN 7 41,786,018 (GRCm39) missense probably benign 0.13
IGL03307:Vmn2r60 APN 7 41,765,971 (GRCm39) missense probably benign 0.14
R0310:Vmn2r60 UTSW 7 41,844,564 (GRCm39) missense possibly damaging 0.54
R0314:Vmn2r60 UTSW 7 41,784,985 (GRCm39) splice site probably benign
R0328:Vmn2r60 UTSW 7 41,791,744 (GRCm39) splice site probably benign
R0464:Vmn2r60 UTSW 7 41,785,255 (GRCm39) missense probably damaging 0.99
R0755:Vmn2r60 UTSW 7 41,844,869 (GRCm39) missense probably damaging 1.00
R1119:Vmn2r60 UTSW 7 41,844,365 (GRCm39) missense possibly damaging 0.68
R1162:Vmn2r60 UTSW 7 41,845,195 (GRCm39) missense probably benign 0.29
R1241:Vmn2r60 UTSW 7 41,786,476 (GRCm39) missense probably benign 0.01
R1404:Vmn2r60 UTSW 7 41,786,211 (GRCm39) missense probably damaging 0.99
R1404:Vmn2r60 UTSW 7 41,786,211 (GRCm39) missense probably damaging 0.99
R1488:Vmn2r60 UTSW 7 41,786,137 (GRCm39) missense probably benign 0.17
R1623:Vmn2r60 UTSW 7 41,785,279 (GRCm39) nonsense probably null
R1628:Vmn2r60 UTSW 7 41,785,830 (GRCm39) nonsense probably null
R1883:Vmn2r60 UTSW 7 41,786,094 (GRCm39) missense probably damaging 0.99
R1884:Vmn2r60 UTSW 7 41,786,094 (GRCm39) missense probably damaging 0.99
R2275:Vmn2r60 UTSW 7 41,786,251 (GRCm39) nonsense probably null
R2847:Vmn2r60 UTSW 7 41,785,857 (GRCm39) missense probably benign 0.07
R2885:Vmn2r60 UTSW 7 41,790,403 (GRCm39) missense possibly damaging 0.91
R2894:Vmn2r60 UTSW 7 41,785,220 (GRCm39) missense probably benign
R2921:Vmn2r60 UTSW 7 41,790,459 (GRCm39) missense probably damaging 0.98
R2922:Vmn2r60 UTSW 7 41,790,459 (GRCm39) missense probably damaging 0.98
R3772:Vmn2r60 UTSW 7 41,765,980 (GRCm39) missense probably benign 0.35
R3820:Vmn2r60 UTSW 7 41,785,125 (GRCm39) missense probably damaging 0.98
R3822:Vmn2r60 UTSW 7 41,785,125 (GRCm39) missense probably damaging 0.98
R3872:Vmn2r60 UTSW 7 41,785,878 (GRCm39) missense probably benign 0.19
R4222:Vmn2r60 UTSW 7 41,765,952 (GRCm39) missense probably benign 0.08
R4223:Vmn2r60 UTSW 7 41,765,952 (GRCm39) missense probably benign 0.08
R4224:Vmn2r60 UTSW 7 41,765,952 (GRCm39) missense probably benign 0.08
R4526:Vmn2r60 UTSW 7 41,844,667 (GRCm39) missense probably damaging 0.96
R4547:Vmn2r60 UTSW 7 41,785,087 (GRCm39) missense probably null 0.54
R4840:Vmn2r60 UTSW 7 41,785,285 (GRCm39) missense probably damaging 1.00
R5173:Vmn2r60 UTSW 7 41,844,935 (GRCm39) missense probably damaging 0.97
R5231:Vmn2r60 UTSW 7 41,786,448 (GRCm39) missense possibly damaging 0.93
R5480:Vmn2r60 UTSW 7 41,785,154 (GRCm39) missense probably damaging 0.98
R5521:Vmn2r60 UTSW 7 41,845,049 (GRCm39) missense probably damaging 0.99
R5834:Vmn2r60 UTSW 7 41,765,932 (GRCm39) missense probably benign 0.17
R6038:Vmn2r60 UTSW 7 41,844,386 (GRCm39) missense probably benign 0.04
R6038:Vmn2r60 UTSW 7 41,844,386 (GRCm39) missense probably benign 0.04
R6112:Vmn2r60 UTSW 7 41,844,847 (GRCm39) missense probably damaging 1.00
R6149:Vmn2r60 UTSW 7 41,786,400 (GRCm39) missense probably damaging 1.00
R6170:Vmn2r60 UTSW 7 41,785,045 (GRCm39) missense possibly damaging 0.94
R6383:Vmn2r60 UTSW 7 41,765,895 (GRCm39) start codon destroyed probably null 0.04
R6811:Vmn2r60 UTSW 7 41,844,310 (GRCm39) missense probably damaging 1.00
R6876:Vmn2r60 UTSW 7 41,785,087 (GRCm39) missense probably null 0.54
R6997:Vmn2r60 UTSW 7 41,791,716 (GRCm39) missense probably benign 0.00
R7040:Vmn2r60 UTSW 7 41,791,666 (GRCm39) missense probably benign 0.00
R7116:Vmn2r60 UTSW 7 41,786,487 (GRCm39) missense probably benign 0.00
R7128:Vmn2r60 UTSW 7 41,844,536 (GRCm39) missense probably damaging 0.96
R7232:Vmn2r60 UTSW 7 41,786,166 (GRCm39) missense possibly damaging 0.83
R7296:Vmn2r60 UTSW 7 41,785,826 (GRCm39) missense probably benign 0.01
R7376:Vmn2r60 UTSW 7 41,844,631 (GRCm39) missense probably damaging 1.00
R7526:Vmn2r60 UTSW 7 41,845,158 (GRCm39) frame shift probably null
R7527:Vmn2r60 UTSW 7 41,845,158 (GRCm39) frame shift probably null
R7528:Vmn2r60 UTSW 7 41,845,158 (GRCm39) frame shift probably null
R7764:Vmn2r60 UTSW 7 41,844,535 (GRCm39) missense probably damaging 0.99
R7843:Vmn2r60 UTSW 7 41,844,511 (GRCm39) missense probably benign 0.00
R8080:Vmn2r60 UTSW 7 41,790,521 (GRCm39) missense probably benign 0.30
R8290:Vmn2r60 UTSW 7 41,791,690 (GRCm39) missense probably damaging 1.00
R8342:Vmn2r60 UTSW 7 41,790,494 (GRCm39) missense possibly damaging 0.63
R8362:Vmn2r60 UTSW 7 41,844,954 (GRCm39) missense probably damaging 1.00
R8418:Vmn2r60 UTSW 7 41,844,850 (GRCm39) missense probably damaging 0.97
R8848:Vmn2r60 UTSW 7 41,786,169 (GRCm39) missense probably damaging 1.00
R8860:Vmn2r60 UTSW 7 41,791,654 (GRCm39) missense probably damaging 0.99
R8882:Vmn2r60 UTSW 7 41,790,518 (GRCm39) missense probably benign 0.00
R8913:Vmn2r60 UTSW 7 41,785,778 (GRCm39) missense probably benign 0.27
R9190:Vmn2r60 UTSW 7 41,844,935 (GRCm39) missense probably damaging 0.99
R9229:Vmn2r60 UTSW 7 41,791,723 (GRCm39) missense possibly damaging 0.95
R9295:Vmn2r60 UTSW 7 41,785,955 (GRCm39) missense probably benign 0.01
R9335:Vmn2r60 UTSW 7 41,844,332 (GRCm39) missense probably damaging 1.00
R9796:Vmn2r60 UTSW 7 41,785,172 (GRCm39) missense probably benign
RF024:Vmn2r60 UTSW 7 41,790,363 (GRCm39) missense probably benign 0.01
X0023:Vmn2r60 UTSW 7 41,790,538 (GRCm39) missense probably benign 0.01
Predicted Primers PCR Primer
(F):5'- GATGGTTAATGGTATCAAGAGCCC -3'
(R):5'- AGGAGTGCTATATTGGAAGCC -3'

Sequencing Primer
(F):5'- GGTATCAAGAGCCCCTAATTTCATC -3'
(R):5'- TTGGAAGCCAAGATACAAAACACTTC -3'
Posted On 2014-10-02